| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is rkpI [H]
Identifier: 238026330
GI number: 238026330
Start: 714036
End: 715541
Strand: Direct
Name: rkpI [H]
Synonym: bglu_1g06640
Alternate gene names: 238026330
Gene position: 714036-715541 (Clockwise)
Preceding gene: 238026329
Following gene: 339905958
Centisome position: 18.28
GC content: 68.33
Gene sequence:
>1506_bases ATGTTCGCGCTCACCGCGGCGCCGTCGTTCGCGCTCGAGCGCATCGCGCTGCCGCGCGGGCCGTGGCGCCGGCCGTGGCG GTCGGCGTGGCTACATCTGCTTGCCGTATACGCCGTCGCCAACCTGATGCTCGCCGTGACGTCGCGGCCGCTTTTCTCCG CCTTCGCGACGCTGGCGCTCGTCGGCCTGCTCGCGGCCGTCAGCAATGCCAAGTATGAGTCCTTGCGCGAGCCGTTCGTG TTCACCGACCTCAGCCTGTTCAGCCAGCTGTTCTCCCATCCGCGCCTCTACCTGCCGTTCCTGAGCGTCGGCAAGGTCGC TGCGATCGGGGCCGGCATCGTGCTCGTGGTCGCGGGCTTCATCGCTGAGCGGCCCGCGCCGCCTTATCCGGCGTCGGTAT CGCTGCCGCTCGCGGCGCTGCTGTTCGGACTCGCGCTGCCGGCGGCCGCCGCGCTGCCGCTCACGCTCGAGGCCGGCGCC GACCAGCGCCGCCACGGCTTTCTCGCGGTGTTCGTCGCCTACCTGCTGAACGGCCTGCGGCCGGCCACGCTGCGCCGCTT TCGCGAGGCGCTCGCGGCCAGCCCCTACGCGGATGGCGCGCCGCAGCGCCGCCCCGACGTGGTCGTGATCCAGAGCGAGT CGTTCTTCGACGCGCGCCGGCTCGGCGCGGCGATCGCCCCCGGCTTGCTCGCGCGCTTCGACGAGGCGTGCCGCGAGGCG CTCTGGCACGGCCAGTTGCATGTGCCGGCCTGGGGCGCGAACACCATGCGCACCGAATTCGCGGTGCTGACCGGCGCGAG CCAGGCCGCGCTCGGCTACGCGCGCTTCTATCCCTATGCATTCGTCAGACGACGCTGCGCTTCGCTGGCCGCCTGGTTCG GCCGCGGCGGCTACCGCACGCTGGCGATCCATCCGTACTACGCCGACTTTTTCGGGCGCGACCGGGTATTCCCCTTGCTT GGCTTCTCGCGCCTGCTCGACATCGGCCATTTCGCCGGCGCAGCGCGCGCCGGCCCCTACGTCGCGGACGCGGCCGTTGC CGACGCAATCATCGAGGCGCTCGAGGCGCCCGGCGACGAGCCGCGCTTCGTGTTCGCGATGACCATGGAGAATCATGGGC CGTTACATCTCGAAACAGTTTTGCCGGGGGAGTCGACGAACCGCCATACTCTCGGCGACGGCGCGCCGTGGCGCGATCTG ACGGCTTATTTGCGACATATTGAAAATGCGGATGCAATGCTCGGCCGCTTGCTGGATCATTTGCGTTCGAGCCATCGGGA AACGGTGGTCTGCTTTTACGGCGATCACGTGCCCGCCCTGTCTCGGATTTTCGAGCGTCTGGGCAGCAATCCGGAACACA GCGATTTTTTCATCTGGCGTAACCACGGGACAAAAGGGCCCGAACGCCGGGACGTGCGGGCCGAACAACTGGGCGGCCTG CTGTTGCTAGCGACGCAACACGGCAGTCGCATGGATGGGTCGCAGGCATCAGAGAAAACGACATAA
Upstream 100 bases:
>100_bases TGCTGCCGCTGCTGCCGGCCGCGCTGGCCGACGCGATCCTGGGCCGCCTGTCGTACCTGCCTGCCGAGGACGCGGCCAAT TGAGCCTGCTGCCCGGTCTC
Downstream 100 bases:
>100_bases AGATGAACGGAAAGATTGCAATTGTTGGGATCGCGTGCCGCTTTCCCGGGGGTGCCAACAGTCCGGACGAGCTCTGGAGC CTGCTGCGTGCCGAGCGTGA
Product: sulfatase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 501; Mature: 501
Protein sequence:
>501_residues MFALTAAPSFALERIALPRGPWRRPWRSAWLHLLAVYAVANLMLAVTSRPLFSAFATLALVGLLAAVSNAKYESLREPFV FTDLSLFSQLFSHPRLYLPFLSVGKVAAIGAGIVLVVAGFIAERPAPPYPASVSLPLAALLFGLALPAAAALPLTLEAGA DQRRHGFLAVFVAYLLNGLRPATLRRFREALAASPYADGAPQRRPDVVVIQSESFFDARRLGAAIAPGLLARFDEACREA LWHGQLHVPAWGANTMRTEFAVLTGASQAALGYARFYPYAFVRRRCASLAAWFGRGGYRTLAIHPYYADFFGRDRVFPLL GFSRLLDIGHFAGAARAGPYVADAAVADAIIEALEAPGDEPRFVFAMTMENHGPLHLETVLPGESTNRHTLGDGAPWRDL TAYLRHIENADAMLGRLLDHLRSSHRETVVCFYGDHVPALSRIFERLGSNPEHSDFFIWRNHGTKGPERRDVRAEQLGGL LLLATQHGSRMDGSQASEKTT
Sequences:
>Translated_501_residues MFALTAAPSFALERIALPRGPWRRPWRSAWLHLLAVYAVANLMLAVTSRPLFSAFATLALVGLLAAVSNAKYESLREPFV FTDLSLFSQLFSHPRLYLPFLSVGKVAAIGAGIVLVVAGFIAERPAPPYPASVSLPLAALLFGLALPAAAALPLTLEAGA DQRRHGFLAVFVAYLLNGLRPATLRRFREALAASPYADGAPQRRPDVVVIQSESFFDARRLGAAIAPGLLARFDEACREA LWHGQLHVPAWGANTMRTEFAVLTGASQAALGYARFYPYAFVRRRCASLAAWFGRGGYRTLAIHPYYADFFGRDRVFPLL GFSRLLDIGHFAGAARAGPYVADAAVADAIIEALEAPGDEPRFVFAMTMENHGPLHLETVLPGESTNRHTLGDGAPWRDL TAYLRHIENADAMLGRLLDHLRSSHRETVVCFYGDHVPALSRIFERLGSNPEHSDFFIWRNHGTKGPERRDVRAEQLGGL LLLATQHGSRMDGSQASEKTT >Mature_501_residues MFALTAAPSFALERIALPRGPWRRPWRSAWLHLLAVYAVANLMLAVTSRPLFSAFATLALVGLLAAVSNAKYESLREPFV FTDLSLFSQLFSHPRLYLPFLSVGKVAAIGAGIVLVVAGFIAERPAPPYPASVSLPLAALLFGLALPAAAALPLTLEAGA DQRRHGFLAVFVAYLLNGLRPATLRRFREALAASPYADGAPQRRPDVVVIQSESFFDARRLGAAIAPGLLARFDEACREA LWHGQLHVPAWGANTMRTEFAVLTGASQAALGYARFYPYAFVRRRCASLAAWFGRGGYRTLAIHPYYADFFGRDRVFPLL GFSRLLDIGHFAGAARAGPYVADAAVADAIIEALEAPGDEPRFVFAMTMENHGPLHLETVLPGESTNRHTLGDGAPWRDL TAYLRHIENADAMLGRLLDHLRSSHRETVVCFYGDHVPALSRIFERLGSNPEHSDFFIWRNHGTKGPERRDVRAEQLGGL LLLATQHGSRMDGSQASEKTT
Specific function: Involved in antigen K (capsular polysaccharide) biosynthesis [H]
COG id: COG1368
COG function: function code M; Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017849 - InterPro: IPR017850 - InterPro: IPR000917 [H]
Pfam domain/function: PF00884 Sulfatase [H]
EC number: NA
Molecular weight: Translated: 54791; Mature: 54791
Theoretical pI: Translated: 9.52; Mature: 9.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFALTAAPSFALERIALPRGPWRRPWRSAWLHLLAVYAVANLMLAVTSRPLFSAFATLAL CCEECCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH VGLLAAVSNAKYESLREPFVFTDLSLFSQLFSHPRLYLPFLSVGKVAAIGAGIVLVVAGF HHHHHHHHCCHHHHHCCCEEEECHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHHHHHHH IAERPAPPYPASVSLPLAALLFGLALPAAAALPLTLEAGADQRRHGFLAVFVAYLLNGLR HHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHCCCC PATLRRFREALAASPYADGAPQRRPDVVVIQSESFFDARRLGAAIAPGLLARFDEACREA HHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LWHGQLHVPAWGANTMRTEFAVLTGASQAALGYARFYPYAFVRRRCASLAAWFGRGGYRT HHCCCEECCCCCCCHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE LAIHPYYADFFGRDRVFPLLGFSRLLDIGHFAGAARAGPYVADAAVADAIIEALEAPGDE EEEECHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCC PRFVFAMTMENHGPLHLETVLPGESTNRHTLGDGAPWRDLTAYLRHIENADAMLGRLLDH CCEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHH LRSSHRETVVCFYGDHVPALSRIFERLGSNPEHSDFFIWRNHGTKGPERRDVRAEQLGGL HHHCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCHHCCCHHHHCCE LLLATQHGSRMDGSQASEKTT EEEEECCCCCCCCCCCCCCCC >Mature Secondary Structure MFALTAAPSFALERIALPRGPWRRPWRSAWLHLLAVYAVANLMLAVTSRPLFSAFATLAL CCEECCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH VGLLAAVSNAKYESLREPFVFTDLSLFSQLFSHPRLYLPFLSVGKVAAIGAGIVLVVAGF HHHHHHHHCCHHHHHCCCEEEECHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHHHHHHH IAERPAPPYPASVSLPLAALLFGLALPAAAALPLTLEAGADQRRHGFLAVFVAYLLNGLR HHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHCCCC PATLRRFREALAASPYADGAPQRRPDVVVIQSESFFDARRLGAAIAPGLLARFDEACREA HHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LWHGQLHVPAWGANTMRTEFAVLTGASQAALGYARFYPYAFVRRRCASLAAWFGRGGYRT HHCCCEECCCCCCCHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE LAIHPYYADFFGRDRVFPLLGFSRLLDIGHFAGAARAGPYVADAAVADAIIEALEAPGDE EEEECHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCC PRFVFAMTMENHGPLHLETVLPGESTNRHTLGDGAPWRDLTAYLRHIENADAMLGRLLDH CCEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHH LRSSHRETVVCFYGDHVPALSRIFERLGSNPEHSDFFIWRNHGTKGPERRDVRAEQLGGL HHHCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCHHCCCHHHHCCE LLLATQHGSRMDGSQASEKTT EEEEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9079896; 11481430 [H]