| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is bexC [H]
Identifier: 238026327
GI number: 238026327
Start: 710433
End: 711584
Strand: Reverse
Name: bexC [H]
Synonym: bglu_1g06610
Alternate gene names: 238026327
Gene position: 711584-710433 (Counterclockwise)
Preceding gene: 238026335
Following gene: 238026326
Centisome position: 18.22
GC content: 62.5
Gene sequence:
>1152_bases TTGGAAAACGTAACCAGCAGCGACCTCCCCCCCTCATCCGGTACCAAACCGAGCCTTGGACAGCGCCTCAAGAAAGTCAA TCGTCTGTTTCTTCTGACTGTCGCGCTGCCCACCACGCTCGCCGTACTGTATTACGGCGTGATTGCCTCCGACGTCTACG TGTCGGAATCGCGCTTCGTCGTCAGGAGCCCGCAAAAGCAATCGCAGACCAACCTGGTCGGCGCCCTGCTGCAGGGCACG GGTTTTTCGCGCGCCCAGGACGATACCTATGCGGTGGTCGACTACGTCGAGTCGCGCGATGCCTTGCGCGAGCTGAACGC CGGCAACTACATCGTCGACGCCTACTCGCAGCATGGTGACCCGATCAGCCGTTTCCATCGCTGGCCGGACGGCAGCTTCG AATCGCTGTGGAAATACTATGGCAAGCGCATCGTCGACATCGAATTCGACTCGACCTCGGCGATCGCCAAACTGCAGGTC AGGGCATATACGGCGGAGGATGCGGAAAAGATCAACGAACGCCTGCTGGAAATGAGCGAACGGCTGATCAACCGCATGAA TCGCAGGGCGGCAAGCGACTCGGTGAAGTTCGCCCAGGACGAAGTCGACGTCGCGGCGGCCAAGGCGAAGGAAGCCGCCG GCGCATTGGCGGCCTATCGCAGGACCTATACGGTGTTCGATCCCGACCGCCAGTCGGCACTGCAGCTCCAGCAGGTCACG GCCCTGCAGACGCAGATGCTGGCCGCCCAGACTCAGTTGGCCCAGCTCCAGTCGATCTCGCCCAAGAATCCGCAGATCCC GGTACTGCAGACCAATATCGCCAACCTGGAAAAGCAGATCACGGCCGCCACCAGCGGAGTCGCCGGGGGCAAGAACTCGC TGGCCGACAAGGCCGCCGTGTATGCGCGCATGCAACTCGACTCGCAGTTTGCCGACAAGCAACTGGCCTCGGCGATGACA GCGCTGGAGAATGCGCGCGCCGATGCCCAGCGCAAGCAGCTCTACCTCGAGCGCCTGGTCGAGCCGAACACGCCCGATGT CGCCATCGAACCGAAGCGCCTGAAGAGCATCCTCGAGGTGTTCGCGCTCGGCGTCATCGCCTGGGGCATCCTCGAGTTGC TGCTCGCGGGCGTGCGCGAACACAACGACTGA
Upstream 100 bases:
>100_bases CTCGGCAAGTCAGTGAAGCCGGCCCGTCCCTCCCGCGGACGCGGGCAATTGTGTCCGCCGCTCGTCGGACTACGCAGCCT CTCAACGTGACGGAACAAAG
Downstream 100 bases:
>100_bases GGGTCGGACATCGTGCATCACGACACGCCTCTCGCCTCGTCATTGCGCATTCAGCTCCGGGTCGTCGGCGCCTTGTTGAT GCGTGAAATTCTGACACGCT
Product: WcbD
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 383; Mature: 383
Protein sequence:
>383_residues MENVTSSDLPPSSGTKPSLGQRLKKVNRLFLLTVALPTTLAVLYYGVIASDVYVSESRFVVRSPQKQSQTNLVGALLQGT GFSRAQDDTYAVVDYVESRDALRELNAGNYIVDAYSQHGDPISRFHRWPDGSFESLWKYYGKRIVDIEFDSTSAIAKLQV RAYTAEDAEKINERLLEMSERLINRMNRRAASDSVKFAQDEVDVAAAKAKEAAGALAAYRRTYTVFDPDRQSALQLQQVT ALQTQMLAAQTQLAQLQSISPKNPQIPVLQTNIANLEKQITAATSGVAGGKNSLADKAAVYARMQLDSQFADKQLASAMT ALENARADAQRKQLYLERLVEPNTPDVAIEPKRLKSILEVFALGVIAWGILELLLAGVREHND
Sequences:
>Translated_383_residues MENVTSSDLPPSSGTKPSLGQRLKKVNRLFLLTVALPTTLAVLYYGVIASDVYVSESRFVVRSPQKQSQTNLVGALLQGT GFSRAQDDTYAVVDYVESRDALRELNAGNYIVDAYSQHGDPISRFHRWPDGSFESLWKYYGKRIVDIEFDSTSAIAKLQV RAYTAEDAEKINERLLEMSERLINRMNRRAASDSVKFAQDEVDVAAAKAKEAAGALAAYRRTYTVFDPDRQSALQLQQVT ALQTQMLAAQTQLAQLQSISPKNPQIPVLQTNIANLEKQITAATSGVAGGKNSLADKAAVYARMQLDSQFADKQLASAMT ALENARADAQRKQLYLERLVEPNTPDVAIEPKRLKSILEVFALGVIAWGILELLLAGVREHND >Mature_383_residues MENVTSSDLPPSSGTKPSLGQRLKKVNRLFLLTVALPTTLAVLYYGVIASDVYVSESRFVVRSPQKQSQTNLVGALLQGT GFSRAQDDTYAVVDYVESRDALRELNAGNYIVDAYSQHGDPISRFHRWPDGSFESLWKYYGKRIVDIEFDSTSAIAKLQV RAYTAEDAEKINERLLEMSERLINRMNRRAASDSVKFAQDEVDVAAAKAKEAAGALAAYRRTYTVFDPDRQSALQLQQVT ALQTQMLAAQTQLAQLQSISPKNPQIPVLQTNIANLEKQITAATSGVAGGKNSLADKAAVYARMQLDSQFADKQLASAMT ALENARADAQRKQLYLERLVEPNTPDVAIEPKRLKSILEVFALGVIAWGILELLLAGVREHND
Specific function: May form an ATP-driven capsule polysaccharide export apparatus, in association with the BexA, BexB and BexD proteins [H]
COG id: COG3524
COG function: function code M; Capsule polysaccharide export protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the BexC/CtrB/KpsE family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005705 - InterPro: IPR003856 [H]
Pfam domain/function: PF02706 Wzz [H]
EC number: NA
Molecular weight: Translated: 42270; Mature: 42270
Theoretical pI: Translated: 7.71; Mature: 7.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENVTSSDLPPSSGTKPSLGQRLKKVNRLFLLTVALPTTLAVLYYGVIASDVYVSESRFV CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEE VRSPQKQSQTNLVGALLQGTGFSRAQDDTYAVVDYVESRDALRELNAGNYIVDAYSQHGD EECCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECHHHCCC PISRFHRWPDGSFESLWKYYGKRIVDIEFDSTSAIAKLQVRAYTAEDAEKINERLLEMSE HHHHHHCCCCCCHHHHHHHHCCEEEEEEECCCHHHHEEEEEEECHHHHHHHHHHHHHHHH RLINRMNRRAASDSVKFAQDEVDVAAAKAKEAAGALAAYRRTYTVFDPDRQSALQLQQVT HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHH ALQTQMLAAQTQLAQLQSISPKNPQIPVLQTNIANLEKQITAATSGVAGGKNSLADKAAV HHHHHHHHHHHHHHHHHHCCCCCCCCCEEECHHHHHHHHHHHHHCCCCCCCHHHHHHHHH YARMQLDSQFADKQLASAMTALENARADAQRKQLYLERLVEPNTPDVAIEPKRLKSILEV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECHHHHHHHHHH FALGVIAWGILELLLAGVREHND HHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MENVTSSDLPPSSGTKPSLGQRLKKVNRLFLLTVALPTTLAVLYYGVIASDVYVSESRFV CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEE VRSPQKQSQTNLVGALLQGTGFSRAQDDTYAVVDYVESRDALRELNAGNYIVDAYSQHGD EECCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECHHHCCC PISRFHRWPDGSFESLWKYYGKRIVDIEFDSTSAIAKLQVRAYTAEDAEKINERLLEMSE HHHHHHCCCCCCHHHHHHHHCCEEEEEEECCCHHHHEEEEEEECHHHHHHHHHHHHHHHH RLINRMNRRAASDSVKFAQDEVDVAAAKAKEAAGALAAYRRTYTVFDPDRQSALQLQQVT HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHH ALQTQMLAAQTQLAQLQSISPKNPQIPVLQTNIANLEKQITAATSGVAGGKNSLADKAAV HHHHHHHHHHHHHHHHHHCCCCCCCCCEEECHHHHHHHHHHHHHCCCCCCCHHHHHHHHH YARMQLDSQFADKQLASAMTALENARADAQRKQLYLERLVEPNTPDVAIEPKRLKSILEV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECHHHHHHHHHH FALGVIAWGILELLLAGVREHND HHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2082145 [H]