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The map label for this gene is ctrC [H]

Identifier: 238026326

GI number: 238026326

Start: 709629

End: 710420

Strand: Reverse

Name: ctrC [H]

Synonym: bglu_1g06600

Alternate gene names: 238026326

Gene position: 710420-709629 (Counterclockwise)

Preceding gene: 238026327

Following gene: 238026325

Centisome position: 18.19

GC content: 61.74

Gene sequence:

>792_bases
GTGCATCACGACACGCCTCTCGCCTCGTCATTGCGCATTCAGCTCCGGGTCGTCGGCGCCTTGTTGATGCGTGAAATTCT
GACACGCTATGGCCGGCACAACGTCGGCTTTCTGTGGATCTTCTTCGAGCCGATGATGTTCACGCTCGGCGTGCTGGCGC
TCTGGACGATCCTCAACGCCACCCATGGCACGACGCTCTCGATCACCTCGTTCGCGGTGACCGGCTACTCGTCCGTGCTG
CTATGGCGCAACTGTGCGAGCCGTTGCGCCCTGGCCATCCTGCCGAACCAGGCGCTGCTCTATCACCGCAACGTGCGCGT
CATCGACCTGTTCTTCGCGCGGCTGCTTCTGGAGATCTCCGGCGCGACGATGTCCTTCGTGTTCCTGACGGTCTTTTTCG
TGTCGATCGGCATGATGGATCCGCCGAAGAACATCAGCCTGGTGCTGGGCGGATGGCTTCATCTGGCCGCCTTCGGAACC
TCGCTCGGCCTCATCGTCGGCGCCCTGAGCGAGCGCAGCGAAACCGTGGAACGCGTCTGGCACACCATCGCCTATCTGCT
GTTCCCGCTGTCGGGCGCGGTATTCATGGTCGAGTGGATTCCTGAAAAATTCCGCGCCGCGGTGCTCTACCTGCCGATGG
TCCATGGAACCGAAATGCTGCGCGGCGGCTATTATGGCTCCCTGGTCAAGCCGCACTACAGCATCCCCTACATGGTCGCC
TGCGATTCAGTGCTGTTGCTGATCGGCCTGTTCCTCGTGCGCGACGCCAGCAAACGGGTGGAACCCGAATGA

Upstream 100 bases:

>100_bases
GAGCATCCTCGAGGTGTTCGCGCTCGGCGTCATCGCCTGGGGCATCCTCGAGTTGCTGCTCGCGGGCGTGCGCGAACACA
ACGACTGAGGGTCGGACATC

Downstream 100 bases:

>100_bases
TCGATCTGCAGGGCGTCTGCAAGGACTACCACACCCGGCAGGGCCGACGCCGGGTGCTCAATGACATCAACCTGCGCGTG
GCACCGGGCGAAAAGCTCGG

Product: CtrC protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 263; Mature: 263

Protein sequence:

>263_residues
MHHDTPLASSLRIQLRVVGALLMREILTRYGRHNVGFLWIFFEPMMFTLGVLALWTILNATHGTTLSITSFAVTGYSSVL
LWRNCASRCALAILPNQALLYHRNVRVIDLFFARLLLEISGATMSFVFLTVFFVSIGMMDPPKNISLVLGGWLHLAAFGT
SLGLIVGALSERSETVERVWHTIAYLLFPLSGAVFMVEWIPEKFRAAVLYLPMVHGTEMLRGGYYGSLVKPHYSIPYMVA
CDSVLLLIGLFLVRDASKRVEPE

Sequences:

>Translated_263_residues
MHHDTPLASSLRIQLRVVGALLMREILTRYGRHNVGFLWIFFEPMMFTLGVLALWTILNATHGTTLSITSFAVTGYSSVL
LWRNCASRCALAILPNQALLYHRNVRVIDLFFARLLLEISGATMSFVFLTVFFVSIGMMDPPKNISLVLGGWLHLAAFGT
SLGLIVGALSERSETVERVWHTIAYLLFPLSGAVFMVEWIPEKFRAAVLYLPMVHGTEMLRGGYYGSLVKPHYSIPYMVA
CDSVLLLIGLFLVRDASKRVEPE
>Mature_263_residues
MHHDTPLASSLRIQLRVVGALLMREILTRYGRHNVGFLWIFFEPMMFTLGVLALWTILNATHGTTLSITSFAVTGYSSVL
LWRNCASRCALAILPNQALLYHRNVRVIDLFFARLLLEISGATMSFVFLTVFFVSIGMMDPPKNISLVLGGWLHLAAFGT
SLGLIVGALSERSETVERVWHTIAYLLFPLSGAVFMVEWIPEKFRAAVLYLPMVHGTEMLRGGYYGSLVKPHYSIPYMVA
CDSVLLLIGLFLVRDASKRVEPE

Specific function: May form an ATP-driven capsule polysaccharide export apparatus, in association with the CtrB and CtrD proteins [H]

COG id: COG1682

COG function: function code GM; ABC-type polysaccharide/polyol phosphate export systems, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013526
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 29468; Mature: 29468

Theoretical pI: Translated: 9.09; Mature: 9.09

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHHDTPLASSLRIQLRVVGALLMREILTRYGRHNVGFLWIFFEPMMFTLGVLALWTILNA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHC
THGTTLSITSFAVTGYSSVLLWRNCASRCALAILPNQALLYHRNVRVIDLFFARLLLEIS
CCCCEEEEHHHHHHHHHHHHHHHHHHHHHEEEECCCCEEEEECCCHHHHHHHHHHHHHHC
GATMSFVFLTVFFVSIGMMDPPKNISLVLGGWLHLAAFGTSLGLIVGALSERSETVERVW
CCHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HTIAYLLFPLSGAVFMVEWIPEKFRAAVLYLPMVHGTEMLRGGYYGSLVKPHYSIPYMVA
HHHHHHHHHHCCCEEEEECCCHHHHHHHHEEEHHCCHHHHCCCCCCCCCCCCCCCCHHHH
CDSVLLLIGLFLVRDASKRVEPE
HHHHHHHHHHHHHHCHHHCCCCC
>Mature Secondary Structure
MHHDTPLASSLRIQLRVVGALLMREILTRYGRHNVGFLWIFFEPMMFTLGVLALWTILNA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHC
THGTTLSITSFAVTGYSSVLLWRNCASRCALAILPNQALLYHRNVRVIDLFFARLLLEIS
CCCCEEEEHHHHHHHHHHHHHHHHHHHHHEEEECCCCEEEEECCCHHHHHHHHHHHHHHC
GATMSFVFLTVFFVSIGMMDPPKNISLVLGGWLHLAAFGTSLGLIVGALSERSETVERVW
CCHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HTIAYLLFPLSGAVFMVEWIPEKFRAAVLYLPMVHGTEMLRGGYYGSLVKPHYSIPYMVA
HHHHHHHHHHCCCEEEEECCCHHHHHHHHEEEHHCCHHHHCCCCCCCCCCCCCCCCHHHH
CDSVLLLIGLFLVRDASKRVEPE
HHHHHHHHHHHHHHCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1659649; 10710307 [H]