| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is mutL [H]
Identifier: 238026311
GI number: 238026311
Start: 687112
End: 689223
Strand: Reverse
Name: mutL [H]
Synonym: bglu_1g06450
Alternate gene names: 238026311
Gene position: 689223-687112 (Counterclockwise)
Preceding gene: 238026313
Following gene: 238026310
Centisome position: 17.64
GC content: 73.44
Gene sequence:
>2112_bases ATGTCCGAATTTACCGATTCCACCGATTCCACCGGTGCCGACGCCGCCGCGAGCGCCGCCGTCCCCGCGGCCGGCCCGCG CCCGCTGCGCGCGATCCAGCCGCTGCCCGACCAGTTGATCAGCCAGATCGCGGCCGGCGAGGTGGTCGAGCGCCCGGCAT CCGTCGTCAAGGAGTTGCTCGAGAACGCGCTCGACGCGGGCGCCACCACGCTGCGCATCGCACTCGACGAGGGCGGCGTC AAGCGCATCTCGATCACCGACGACGGCTGCGGCATCCCCGCCGACGAGCTGCCGCTCGCGCTGATGCGCCACGCCACCAG CAAGATCCGCTCGCTCGTCGAGCTCGAGTCGGTAGCCACGCTCGGCTTTCGCGGCGAGGCGCTGGCCTCGATCGCCTCGG TCTCCGAGCTGGCGATCACGAGCCGCACCGAGCAGGCGCCGCACGCCACGCGCATCGACGCCGACACCGGCGCGCTGTCG CCCGCGGCCGGCACGCGCGGCACCACCATCGAGGTGCGCGAGCTGTACTTCAACACGCCTGCGCGCCGCAAGTTCCTGAA GAGCGAGCAGACCGAATTCGGCCACTGCCTCGAGATGATCCGCCGCGTGGCGCTGGCACGCCCCGACGTGGCGATCTCGG TGCTGCACAACGGCCGGGCCGTCGAGCACTGGAACGCGAGCGAGCCGGCCGTGCGCGTCGCGAAGATCCTCGGCGAGGGC TTCGCCACCGCGCACCTGCCGCTCGACGAGCAGGCCGGGCCGCTCGCCGTGTACGGCTGCGCGGGCCTGCCCACCGCGAG CCGCGGCCGCGCCGACCAGCAATACTTCTTCGTCAACGGCCGCTTCGTGCGCGACAAGCTGCTCACGCACGCGGTGCGCG CCGCCTACGAGGACGTGCTGCACGGCGACCGCTACCCGTCCTACGTGCTGTTTCTCGACCTGCCGCCCGAGGCCGTCGAC GTGAACGTCCATCCGTCGAAGATCGAGGTGCGGTTTCGCGATTCACGCTCGATCCACCAGTACGTGTTCCACGCGGTGCA GCGCGCGCTCGCGCGGCACGCGGGGGCCTCGCCCGGGACCACGGCGGGCGGCCACGCCGCGCATCTGGCACCGGCCGGCG AGAGCGCCGCGCCAGAACGTGCCCCGGCCGGGTCCGCCGGCCAAGCCGGCGACCACGCGGCACGCGCCGACGGCGTGAGC GGCTCCGGCTTGGCCGATGGCGCCGGCAGCGCGACGTCCTCGGGCCCGGCGGGCGGCTTCGGCCGCGCCTCGGGCGGCTT CGGCTCGGCCGCCGGCAGCAGCAGCAGCGGTGGATTCGGTGGCGGCGGTGCGGCGCGCTCGGGCGCGGGCAACACCTGGA CGCGCCATTCACGCATGACGCAGGGCACGCTGCCGGTCGCGCAGCCGCTGGCGCTCTACGACGCGTCGCCCGGGCGCAAG GCAGCCGGCGGCGAAGCGACCGGCACGGCCGAGCCGGCGCCGTTCGGCGCCACACCCGGCACGCTGCCGGCCGACGCCGG GCACGACGCGCAGCCGCTCGGCTTCGCGCTCGGCCAGGTCCACGGCATCTACGTGCTCGCGCAGAACGCGCAGGGCCTCG TGATCGTCGACATGCACGCCGCGCACGAACGCATCCTCTACGAGCAGTTCAAGACCGCGCTCGCGAACCGCGCGATCGCG GTGCAGTCGCTGCTGCTGCCGGTGACGATGGCGGCCACGCCGGTCGAGATCGGTACCGCCGAGGAGGAACGCGAGACGCT CGACGCGCTCGGCTTCGACCTGGCCACGCTCTCGCCCACCACCCTCGCGATCCGCGCGGTGCCCGCACTGCTGCGCGATG CCGACCTGCCGACGCTGGCGCGAGCGGTGCTGGCCGACCTGCACGAATTCGGCGGCTCGCGCGTGCTGACCGAGCGCCAG CACGAACTGCTCGGCACGCTGGCCTGCCATCATGCGGTGCGTGCCAACCGGCGCCTGACGCTCGACGAGATGAACGCGCT GCTGCGCCAGATGGAGGCCACCGAGCGCGCCGACCAGTGCAACCACGGCCGGCCGACCTGGTACCAGCTCACGCTCGGCG ATCTCGACCGCCTGTTCATGCGCGGCCAATGA
Upstream 100 bases:
>100_bases TGATACCGAAGGAAGCCCGGGCGCCCGTGGATGCACTTGAAAAAAATTGTGTCCGCGCCCGGCGCCGGTGCCGGCTCGGC GGCGTCGTTATAATTCCCGC
Downstream 100 bases:
>100_bases GCGGCGCACCCGAATCGCCCCGCGTCACCGTCGCCTGCCTGCTCGGCCCCACCGCCTCGGGCAAGACCGCCGCGGCGCTG GCGCTGGCCGAGCGGCGGCC
Product: DNA mismatch repair protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 703; Mature: 702
Protein sequence:
>703_residues MSEFTDSTDSTGADAAASAAVPAAGPRPLRAIQPLPDQLISQIAAGEVVERPASVVKELLENALDAGATTLRIALDEGGV KRISITDDGCGIPADELPLALMRHATSKIRSLVELESVATLGFRGEALASIASVSELAITSRTEQAPHATRIDADTGALS PAAGTRGTTIEVRELYFNTPARRKFLKSEQTEFGHCLEMIRRVALARPDVAISVLHNGRAVEHWNASEPAVRVAKILGEG FATAHLPLDEQAGPLAVYGCAGLPTASRGRADQQYFFVNGRFVRDKLLTHAVRAAYEDVLHGDRYPSYVLFLDLPPEAVD VNVHPSKIEVRFRDSRSIHQYVFHAVQRALARHAGASPGTTAGGHAAHLAPAGESAAPERAPAGSAGQAGDHAARADGVS GSGLADGAGSATSSGPAGGFGRASGGFGSAAGSSSSGGFGGGGAARSGAGNTWTRHSRMTQGTLPVAQPLALYDASPGRK AAGGEATGTAEPAPFGATPGTLPADAGHDAQPLGFALGQVHGIYVLAQNAQGLVIVDMHAAHERILYEQFKTALANRAIA VQSLLLPVTMAATPVEIGTAEEERETLDALGFDLATLSPTTLAIRAVPALLRDADLPTLARAVLADLHEFGGSRVLTERQ HELLGTLACHHAVRANRRLTLDEMNALLRQMEATERADQCNHGRPTWYQLTLGDLDRLFMRGQ
Sequences:
>Translated_703_residues MSEFTDSTDSTGADAAASAAVPAAGPRPLRAIQPLPDQLISQIAAGEVVERPASVVKELLENALDAGATTLRIALDEGGV KRISITDDGCGIPADELPLALMRHATSKIRSLVELESVATLGFRGEALASIASVSELAITSRTEQAPHATRIDADTGALS PAAGTRGTTIEVRELYFNTPARRKFLKSEQTEFGHCLEMIRRVALARPDVAISVLHNGRAVEHWNASEPAVRVAKILGEG FATAHLPLDEQAGPLAVYGCAGLPTASRGRADQQYFFVNGRFVRDKLLTHAVRAAYEDVLHGDRYPSYVLFLDLPPEAVD VNVHPSKIEVRFRDSRSIHQYVFHAVQRALARHAGASPGTTAGGHAAHLAPAGESAAPERAPAGSAGQAGDHAARADGVS GSGLADGAGSATSSGPAGGFGRASGGFGSAAGSSSSGGFGGGGAARSGAGNTWTRHSRMTQGTLPVAQPLALYDASPGRK AAGGEATGTAEPAPFGATPGTLPADAGHDAQPLGFALGQVHGIYVLAQNAQGLVIVDMHAAHERILYEQFKTALANRAIA VQSLLLPVTMAATPVEIGTAEEERETLDALGFDLATLSPTTLAIRAVPALLRDADLPTLARAVLADLHEFGGSRVLTERQ HELLGTLACHHAVRANRRLTLDEMNALLRQMEATERADQCNHGRPTWYQLTLGDLDRLFMRGQ >Mature_702_residues SEFTDSTDSTGADAAASAAVPAAGPRPLRAIQPLPDQLISQIAAGEVVERPASVVKELLENALDAGATTLRIALDEGGVK RISITDDGCGIPADELPLALMRHATSKIRSLVELESVATLGFRGEALASIASVSELAITSRTEQAPHATRIDADTGALSP AAGTRGTTIEVRELYFNTPARRKFLKSEQTEFGHCLEMIRRVALARPDVAISVLHNGRAVEHWNASEPAVRVAKILGEGF ATAHLPLDEQAGPLAVYGCAGLPTASRGRADQQYFFVNGRFVRDKLLTHAVRAAYEDVLHGDRYPSYVLFLDLPPEAVDV NVHPSKIEVRFRDSRSIHQYVFHAVQRALARHAGASPGTTAGGHAAHLAPAGESAAPERAPAGSAGQAGDHAARADGVSG SGLADGAGSATSSGPAGGFGRASGGFGSAAGSSSSGGFGGGGAARSGAGNTWTRHSRMTQGTLPVAQPLALYDASPGRKA AGGEATGTAEPAPFGATPGTLPADAGHDAQPLGFALGQVHGIYVLAQNAQGLVIVDMHAAHERILYEQFKTALANRAIAV QSLLLPVTMAATPVEIGTAEEERETLDALGFDLATLSPTTLAIRAVPALLRDADLPTLARAVLADLHEFGGSRVLTERQH ELLGTLACHHAVRANRRLTLDEMNALLRQMEATERADQCNHGRPTWYQLTLGDLDRLFMRGQ
Specific function: This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a "molecular matchmaker", a protein that promotes the formation of a stable complex between two or more DNA-bindi
COG id: COG0323
COG function: function code L; DNA mismatch repair enzyme (predicted ATPase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DNA mismatch repair mutL/hexB family [H]
Homologues:
Organism=Homo sapiens, GI4557757, Length=330, Percent_Identity=34.8484848484849, Blast_Score=189, Evalue=1e-47, Organism=Homo sapiens, GI189458898, Length=351, Percent_Identity=28.7749287749288, Blast_Score=149, Evalue=1e-35, Organism=Homo sapiens, GI4505911, Length=463, Percent_Identity=25.4859611231102, Blast_Score=149, Evalue=1e-35, Organism=Homo sapiens, GI189458896, Length=453, Percent_Identity=26.4900662251656, Blast_Score=142, Evalue=2e-33, Organism=Homo sapiens, GI310128478, Length=345, Percent_Identity=26.6666666666667, Blast_Score=141, Evalue=2e-33, Organism=Homo sapiens, GI4505913, Length=345, Percent_Identity=26.6666666666667, Blast_Score=141, Evalue=2e-33, Organism=Homo sapiens, GI310128480, Length=300, Percent_Identity=24.3333333333333, Blast_Score=100, Evalue=5e-21, Organism=Homo sapiens, GI263191589, Length=235, Percent_Identity=31.063829787234, Blast_Score=97, Evalue=4e-20, Organism=Homo sapiens, GI91992160, Length=268, Percent_Identity=26.1194029850746, Blast_Score=72, Evalue=1e-12, Organism=Homo sapiens, GI91992162, Length=268, Percent_Identity=25.7462686567164, Blast_Score=72, Evalue=1e-12, Organism=Escherichia coli, GI1790612, Length=331, Percent_Identity=51.3595166163142, Blast_Score=317, Evalue=1e-87, Organism=Caenorhabditis elegans, GI71991825, Length=320, Percent_Identity=33.75, Blast_Score=158, Evalue=9e-39, Organism=Caenorhabditis elegans, GI17562796, Length=364, Percent_Identity=25.8241758241758, Blast_Score=135, Evalue=7e-32, Organism=Saccharomyces cerevisiae, GI6323819, Length=364, Percent_Identity=31.043956043956, Blast_Score=179, Evalue=1e-45, Organism=Saccharomyces cerevisiae, GI6324247, Length=468, Percent_Identity=23.0769230769231, Blast_Score=126, Evalue=1e-29, Organism=Saccharomyces cerevisiae, GI6325093, Length=697, Percent_Identity=20.2295552367288, Blast_Score=88, Evalue=4e-18, Organism=Saccharomyces cerevisiae, GI6323063, Length=366, Percent_Identity=22.9508196721311, Blast_Score=71, Evalue=5e-13, Organism=Drosophila melanogaster, GI17136968, Length=320, Percent_Identity=33.4375, Blast_Score=170, Evalue=3e-42, Organism=Drosophila melanogaster, GI17136970, Length=348, Percent_Identity=27.0114942528736, Blast_Score=106, Evalue=4e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR002099 - InterPro: IPR013507 - InterPro: IPR014762 - InterPro: IPR020667 - InterPro: IPR014763 - InterPro: IPR014790 - InterPro: IPR020568 - InterPro: IPR014721 [H]
Pfam domain/function: PF01119 DNA_mis_repair; PF02518 HATPase_c; PF08676 MutL_C [H]
EC number: NA
Molecular weight: Translated: 73450; Mature: 73319
Theoretical pI: Translated: 6.41; Mature: 6.41
Prosite motif: PS00058 DNA_MISMATCH_REPAIR_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEFTDSTDSTGADAAASAAVPAAGPRPLRAIQPLPDQLISQIAAGEVVERPASVVKELL CCCCCCCCCCCCCCHHHHCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH ENALDAGATTLRIALDEGGVKRISITDDGCGIPADELPLALMRHATSKIRSLVELESVAT HHHHCCCCEEEEEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LGFRGEALASIASVSELAITSRTEQAPHATRIDADTGALSPAAGTRGTTIEVRELYFNTP CCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCEEEEHHHHHCCH ARRKFLKSEQTEFGHCLEMIRRVALARPDVAISVLHNGRAVEHWNASEPAVRVAKILGEG HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCEEECCCCCCHHHHHHHHHHCC FATAHLPLDEQAGPLAVYGCAGLPTASRGRADQQYFFVNGRFVRDKLLTHAVRAAYEDVL CCEEECCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHH HGDRYPSYVLFLDLPPEAVDVNVHPSKIEVRFRDSRSIHQYVFHAVQRALARHAGASPGT CCCCCCCEEEEEECCCCEEEEEECCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCC TAGGHAAHLAPAGESAAPERAPAGSAGQAGDHAARADGVSGSGLADGAGSATSSGPAGGF CCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCC GRASGGFGSAAGSSSSGGFGGGGAARSGAGNTWTRHSRMTQGTLPVAQPLALYDASPGRK CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCHHEECCCCCCC AAGGEATGTAEPAPFGATPGTLPADAGHDAQPLGFALGQVHGIYVLAQNAQGLVIVDMHA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCEEEEEEECCCCEEEEECHH AHERILYEQFKTALANRAIAVQSLLLPVTMAATPVEIGTAEEERETLDALGFDLATLSPT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCHHHCCCH TLAIRAVPALLRDADLPTLARAVLADLHEFGGSRVLTERQHELLGTLACHHAVRANRRLT HHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC LDEMNALLRQMEATERADQCNHGRPTWYQLTLGDLDRLFMRGQ HHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHCCC >Mature Secondary Structure SEFTDSTDSTGADAAASAAVPAAGPRPLRAIQPLPDQLISQIAAGEVVERPASVVKELL CCCCCCCCCCCCCHHHHCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH ENALDAGATTLRIALDEGGVKRISITDDGCGIPADELPLALMRHATSKIRSLVELESVAT HHHHCCCCEEEEEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LGFRGEALASIASVSELAITSRTEQAPHATRIDADTGALSPAAGTRGTTIEVRELYFNTP CCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCEEEEHHHHHCCH ARRKFLKSEQTEFGHCLEMIRRVALARPDVAISVLHNGRAVEHWNASEPAVRVAKILGEG HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCEEECCCCCCHHHHHHHHHHCC FATAHLPLDEQAGPLAVYGCAGLPTASRGRADQQYFFVNGRFVRDKLLTHAVRAAYEDVL CCEEECCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHH HGDRYPSYVLFLDLPPEAVDVNVHPSKIEVRFRDSRSIHQYVFHAVQRALARHAGASPGT CCCCCCCEEEEEECCCCEEEEEECCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCC TAGGHAAHLAPAGESAAPERAPAGSAGQAGDHAARADGVSGSGLADGAGSATSSGPAGGF CCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCC GRASGGFGSAAGSSSSGGFGGGGAARSGAGNTWTRHSRMTQGTLPVAQPLALYDASPGRK CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCHHEECCCCCCC AAGGEATGTAEPAPFGATPGTLPADAGHDAQPLGFALGQVHGIYVLAQNAQGLVIVDMHA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCEEEEEEECCCCEEEEECHH AHERILYEQFKTALANRAIAVQSLLLPVTMAATPVEIGTAEEERETLDALGFDLATLSPT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCHHHCCCH TLAIRAVPALLRDADLPTLARAVLADLHEFGGSRVLTERQHELLGTLACHHAVRANRRLT HHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC LDEMNALLRQMEATERADQCNHGRPTWYQLTLGDLDRLFMRGQ HHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12910271 [H]