| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is recG [H]
Identifier: 238026276
GI number: 238026276
Start: 640466
End: 642877
Strand: Direct
Name: recG [H]
Synonym: bglu_1g06090
Alternate gene names: 238026276
Gene position: 640466-642877 (Clockwise)
Preceding gene: 238026270
Following gene: 238026277
Centisome position: 16.39
GC content: 74.09
Gene sequence:
>2412_bases ATGCCCGTACCCGCCCGCCGCTCCGTTTCCGCCGCTGCCGCCCCCGATGCCGAGGTCGGCGACGCCGCGCGCGAGCACGG CCACGGCGCCGTGCCGCACGCCCCGGCGAGCCCGCCGACGCGCAGCCGCACGCCGCGGCGCGGCCGCGACGGACGGCTTG CCGAGCCCGCCGTGGAAGCGGCCGACGCCGCGCGCGGCGATCCGGCTGGCCGAGCGGGCGAGGGCGGCTCCGGCACGGCG CGGGTCGCCGGCCGGGACGAGGCCGGCGATGCCGACCACGCCGACGCCGCCGACGCTGCGGACGCGCCGCCCGCCAGGGG CGCGAAGGCCGCCAAGCCGGCCAAGGCCGCGCCCGCCAAGCTCGTCAAGACCGCCGACAAGCTCGCCAAGCTCGGCCTTA CGCGCTCGATCGACCTCGTGCTGCACCTGCCGATGCGCTACGAGGACGAGACCACGCTCACGCCGATCCGCGAGCTGCTG CCCGGCGAGGTCGCGCAGACCGAGGGCGTGGTCTACGACAACGAAATCACCTATCGGCCGCGCCGCCAGCTGCTGGTGAA GCTGCGCGACGACGACGGCGCCGAGCTGGTGCTGCGCTTCCTGAATTTCTACGGCTCGCAGGTCAAGCAGATGGCCGTGG GCCAGCGGCTGCGCGTGCGCGGCGACATCCGCGGCGGCTTCTTCGGGCTCGAGATCGTGCATCCCGCGGTACGCGTGGTC GACGAGAACACCCCGCTGGCGCAGGCGCTGACACCGGTCTACCCGAGCACGGCCGGGGTCTCGCAGGCCTATCTGCGCAA GGCGATCGACAACGCGCTGGCGCGCACGCCGCTGCCCGAGCTGCTGCCGCCCGAGGTGGCCGCCGCGTACCTGCAGCCGC TCGGCGTGCCGACCCTGGCCGACGCGGTGCGCCAGCTCCATCACCCGGCTGTCGACGACGACGAGACCGCGCTGATCGAC GGCACTCATCCGGCCTGGATCCGCATCAAGTTCGACGAGCTGCTCGCGCAGCAGCTCTCGCTCAAGCGCGCGCACGAGGA GCGCCGCACGCGCGCGGCGCCCGCCATGCCGCGCCGCGCGCCGGCCGACGCCGGCTCGCTCGCCGCGCGGCTGCTGGCGG CGCTGCCGTTCGCGCTGACCGGCGCGCAGGCGCGCGTGGTCGACGAGATCTCGCACGACCTGACGCAGCCCCACCCGATG CAGCGGCTCCTGCAAGGCGACGTCGGCAGCGGCAAGACGGTGGTGGCGGCGCTGGCGGCGGCGCAGGCGATCGACGCCGG CTACCAGGCCGCACTGATGGCGCCCACCGAGATCCTCGCCGAACAGCACGCGCGCAAGCTGCGCGGCTGGCTCGAACCGC TCGGCGTGACGGTGGCATGGCTGGCCGGCAGCCTGAAGGCGAAGGACAAGCGCGCGGCGATCGAGGCCGCCGCGCTCGGC ACCGCGCAGCTCGTGATCGGCACCCACGCGATCATCCAGGACAGCGTCGAGTTCGCGCGGCTCGGGCTGGTGATCGTCGA CGAGCAGCACCGCTTCGGGGTGGCCCAGCGGCTCGCGCTGCGTGCCAAGGCGGGCGGCCCGGCCGGCTTCCAGCCGCACC AGCTGATGATGTCGGCCACGCCGATCCCGCGCACGCTTGCCATGACCTACTACGCCGATCTGGAAGTCTCGACCATCGAC GAGCTGCCGCCGGGACGCAGCCCGATCGTCACCAAGCTGGTCGGCGACGCGCGCCGCGAGGAGGTGATCGCCCGCGTGCG CGACGCGGCGCTGGGCGGGCGGCAGGTGTACTGGGTCTGTCCGCTGATCGAGGAGAGCGAGACGCTGCAGCTGCAGACCG CCGTGGAAACCTACGAGACGCTCGTCGCCGCGCTGCCCGGCATCCAGGTCGGGCTGGTGCACGGACGCCTCGCGCCTGCC GAGAAGGCCGCCGTGATGGAGGCCTTCTCGCGCAACGAGGTGCAGCTGCTGGTGGCCACCACCGTGATCGAGGTCGGCGT GGACGTGCCGAATGCCTCGCTGATGGTGATCGAGCATGCCGAGCGCTTCGGCCTCGCCCAGCTGCACCAGCTGCGCGGGC GCGTCGGCCGCGGCACCGCGGCCTCGGCCTGCGTGCTGATGTACAGCGGCCCGCTGTCGATCGCCGGCCGCGAGCGTCTG AAGACCATGCGCGAGACCAACGACGGCTTCGAGATCGCGCGCCGCGACCTGGAGATCCGCGGCCCCGGCGAGTTCCTGGG GGCGCGGCAGTCCGGCGCCGCCATGCTGCGCTTCGCCGACCTGGAGCGCGACGGCTGGCTGATCGAGCCGGCCCGCGAGG CCGCCGGCGTGCTGATCGCGCGCTATCCGGACGTGGTGACCCAGCATCTGGCCCGCTGGCTCGGCGCGCGCGAGCAATTC CTGAAGGCCTGA
Upstream 100 bases:
>100_bases CGCTATGATGGCGGGGTCGCGCGGCTCGCGGGCGCCGCCCGGTCGCGCGACGTCAAAGCCGATATTGTACGTTGCTTGCC CCTTGCGAACTGCCGATCCG
Downstream 100 bases:
>100_bases GCGACCGGTGACGGCGTCGTGTTTGATTCGACCCCTAAAGCGACGCGCCATCTGCCGCCAAATATGACACCGAAGATGGT TGGCGAAATGGGCCTATCCG
Product: ATP-dependent DNA helicase RecG
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 803; Mature: 802
Protein sequence:
>803_residues MPVPARRSVSAAAAPDAEVGDAAREHGHGAVPHAPASPPTRSRTPRRGRDGRLAEPAVEAADAARGDPAGRAGEGGSGTA RVAGRDEAGDADHADAADAADAPPARGAKAAKPAKAAPAKLVKTADKLAKLGLTRSIDLVLHLPMRYEDETTLTPIRELL PGEVAQTEGVVYDNEITYRPRRQLLVKLRDDDGAELVLRFLNFYGSQVKQMAVGQRLRVRGDIRGGFFGLEIVHPAVRVV DENTPLAQALTPVYPSTAGVSQAYLRKAIDNALARTPLPELLPPEVAAAYLQPLGVPTLADAVRQLHHPAVDDDETALID GTHPAWIRIKFDELLAQQLSLKRAHEERRTRAAPAMPRRAPADAGSLAARLLAALPFALTGAQARVVDEISHDLTQPHPM QRLLQGDVGSGKTVVAALAAAQAIDAGYQAALMAPTEILAEQHARKLRGWLEPLGVTVAWLAGSLKAKDKRAAIEAAALG TAQLVIGTHAIIQDSVEFARLGLVIVDEQHRFGVAQRLALRAKAGGPAGFQPHQLMMSATPIPRTLAMTYYADLEVSTID ELPPGRSPIVTKLVGDARREEVIARVRDAALGGRQVYWVCPLIEESETLQLQTAVETYETLVAALPGIQVGLVHGRLAPA EKAAVMEAFSRNEVQLLVATTVIEVGVDVPNASLMVIEHAERFGLAQLHQLRGRVGRGTAASACVLMYSGPLSIAGRERL KTMRETNDGFEIARRDLEIRGPGEFLGARQSGAAMLRFADLERDGWLIEPAREAAGVLIARYPDVVTQHLARWLGAREQF LKA
Sequences:
>Translated_803_residues MPVPARRSVSAAAAPDAEVGDAAREHGHGAVPHAPASPPTRSRTPRRGRDGRLAEPAVEAADAARGDPAGRAGEGGSGTA RVAGRDEAGDADHADAADAADAPPARGAKAAKPAKAAPAKLVKTADKLAKLGLTRSIDLVLHLPMRYEDETTLTPIRELL PGEVAQTEGVVYDNEITYRPRRQLLVKLRDDDGAELVLRFLNFYGSQVKQMAVGQRLRVRGDIRGGFFGLEIVHPAVRVV DENTPLAQALTPVYPSTAGVSQAYLRKAIDNALARTPLPELLPPEVAAAYLQPLGVPTLADAVRQLHHPAVDDDETALID GTHPAWIRIKFDELLAQQLSLKRAHEERRTRAAPAMPRRAPADAGSLAARLLAALPFALTGAQARVVDEISHDLTQPHPM QRLLQGDVGSGKTVVAALAAAQAIDAGYQAALMAPTEILAEQHARKLRGWLEPLGVTVAWLAGSLKAKDKRAAIEAAALG TAQLVIGTHAIIQDSVEFARLGLVIVDEQHRFGVAQRLALRAKAGGPAGFQPHQLMMSATPIPRTLAMTYYADLEVSTID ELPPGRSPIVTKLVGDARREEVIARVRDAALGGRQVYWVCPLIEESETLQLQTAVETYETLVAALPGIQVGLVHGRLAPA EKAAVMEAFSRNEVQLLVATTVIEVGVDVPNASLMVIEHAERFGLAQLHQLRGRVGRGTAASACVLMYSGPLSIAGRERL KTMRETNDGFEIARRDLEIRGPGEFLGARQSGAAMLRFADLERDGWLIEPAREAAGVLIARYPDVVTQHLARWLGAREQF LKA >Mature_802_residues PVPARRSVSAAAAPDAEVGDAAREHGHGAVPHAPASPPTRSRTPRRGRDGRLAEPAVEAADAARGDPAGRAGEGGSGTAR VAGRDEAGDADHADAADAADAPPARGAKAAKPAKAAPAKLVKTADKLAKLGLTRSIDLVLHLPMRYEDETTLTPIRELLP GEVAQTEGVVYDNEITYRPRRQLLVKLRDDDGAELVLRFLNFYGSQVKQMAVGQRLRVRGDIRGGFFGLEIVHPAVRVVD ENTPLAQALTPVYPSTAGVSQAYLRKAIDNALARTPLPELLPPEVAAAYLQPLGVPTLADAVRQLHHPAVDDDETALIDG THPAWIRIKFDELLAQQLSLKRAHEERRTRAAPAMPRRAPADAGSLAARLLAALPFALTGAQARVVDEISHDLTQPHPMQ RLLQGDVGSGKTVVAALAAAQAIDAGYQAALMAPTEILAEQHARKLRGWLEPLGVTVAWLAGSLKAKDKRAAIEAAALGT AQLVIGTHAIIQDSVEFARLGLVIVDEQHRFGVAQRLALRAKAGGPAGFQPHQLMMSATPIPRTLAMTYYADLEVSTIDE LPPGRSPIVTKLVGDARREEVIARVRDAALGGRQVYWVCPLIEESETLQLQTAVETYETLVAALPGIQVGLVHGRLAPAE KAAVMEAFSRNEVQLLVATTVIEVGVDVPNASLMVIEHAERFGLAQLHQLRGRVGRGTAASACVLMYSGPLSIAGRERLK TMRETNDGFEIARRDLEIRGPGEFLGARQSGAAMLRFADLERDGWLIEPAREAAGVLIARYPDVVTQHLARWLGAREQFL KA
Specific function: Critical role in recombination and DNA repair. Help process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3' to 5' polarity. RecG unwind branched dup
COG id: COG1200
COG function: function code LK; RecG-like helicase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI2367254, Length=686, Percent_Identity=53.0612244897959, Blast_Score=640, Evalue=0.0, Organism=Escherichia coli, GI1787357, Length=385, Percent_Identity=37.1428571428571, Blast_Score=225, Evalue=7e-60,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR004609 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR016027 - InterPro: IPR004365 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C; PF01336 tRNA_anti [H]
EC number: =3.6.4.12 [H]
Molecular weight: Translated: 85926; Mature: 85795
Theoretical pI: Translated: 7.41; Mature: 7.41
Prosite motif: PS00435 PEROXIDASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVPARRSVSAAAAPDAEVGDAAREHGHGAVPHAPASPPTRSRTPRRGRDGRLAEPAVEA CCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH ADAARGDPAGRAGEGGSGTARVAGRDEAGDADHADAADAADAPPARGAKAAKPAKAAPAK HHHCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH LVKTADKLAKLGLTRSIDLVLHLPMRYEDETTLTPIRELLPGEVAQTEGVVYDNEITYRP HHHHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHCCCCHHHCCCEEECCCCCCCC RRQLLVKLRDDDGAELVLRFLNFYGSQVKQMAVGQRLRVRGDIRGGFFGLEIVHPAVRVV HHEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCHHEEEECCCCCEEHHHHHHHHHHHC DENTPLAQALTPVYPSTAGVSQAYLRKAIDNALARTPLPELLPPEVAAAYLQPLGVPTLA CCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHH DAVRQLHHPAVDDDETALIDGTHPAWIRIKFDELLAQQLSLKRAHEERRTRAAPAMPRRA HHHHHHCCCCCCCCCEEEEECCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC PADAGSLAARLLAALPFALTGAQARVVDEISHDLTQPHPMQRLLQGDVGSGKTVVAALAA CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHH AQAIDAGYQAALMAPTEILAEQHARKLRGWLEPLGVTVAWLAGSLKAKDKRAAIEAAALG HHHHHCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCC TAQLVIGTHAIIQDSVEFARLGLVIVDEQHRFGVAQRLALRAKAGGPAGFQPHQLMMSAT CHHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHCCCCCCCCCHHHHHEECC PIPRTLAMTYYADLEVSTIDELPPGRSPIVTKLVGDARREEVIARVRDAALGGRQVYWVC CCCHHEEEEEEECCEEEHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEE PLIEESETLQLQTAVETYETLVAALPGIQVGLVHGRLAPAEKAAVMEAFSRNEVQLLVAT CEECCCCCEEHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHCCCCEEEEEEH TVIEVGVDVPNASLMVIEHAERFGLAQLHQLRGRVGRGTAASACVLMYSGPLSIAGRERL HHHHHCCCCCCCCEEEEECHHHCCHHHHHHHHCCCCCCCHHCEEEEEECCCCCCCCHHHH KTMRETNDGFEIARRDLEIRGPGEFLGARQSGAAMLRFADLERDGWLIEPAREAAGVLIA HHHHHCCCCHHHHHHCCEECCCHHHHCCCCCCCEEEEEEECCCCCCEECCCHHHCCEEEE RYPDVVTQHLARWLGAREQFLKA CCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure PVPARRSVSAAAAPDAEVGDAAREHGHGAVPHAPASPPTRSRTPRRGRDGRLAEPAVEA CCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH ADAARGDPAGRAGEGGSGTARVAGRDEAGDADHADAADAADAPPARGAKAAKPAKAAPAK HHHCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH LVKTADKLAKLGLTRSIDLVLHLPMRYEDETTLTPIRELLPGEVAQTEGVVYDNEITYRP HHHHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHCCCCHHHCCCEEECCCCCCCC RRQLLVKLRDDDGAELVLRFLNFYGSQVKQMAVGQRLRVRGDIRGGFFGLEIVHPAVRVV HHEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCHHEEEECCCCCEEHHHHHHHHHHHC DENTPLAQALTPVYPSTAGVSQAYLRKAIDNALARTPLPELLPPEVAAAYLQPLGVPTLA CCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHH DAVRQLHHPAVDDDETALIDGTHPAWIRIKFDELLAQQLSLKRAHEERRTRAAPAMPRRA HHHHHHCCCCCCCCCEEEEECCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC PADAGSLAARLLAALPFALTGAQARVVDEISHDLTQPHPMQRLLQGDVGSGKTVVAALAA CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHH AQAIDAGYQAALMAPTEILAEQHARKLRGWLEPLGVTVAWLAGSLKAKDKRAAIEAAALG HHHHHCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCC TAQLVIGTHAIIQDSVEFARLGLVIVDEQHRFGVAQRLALRAKAGGPAGFQPHQLMMSAT CHHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHCCCCCCCCCHHHHHEECC PIPRTLAMTYYADLEVSTIDELPPGRSPIVTKLVGDARREEVIARVRDAALGGRQVYWVC CCCHHEEEEEEECCEEEHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEE PLIEESETLQLQTAVETYETLVAALPGIQVGLVHGRLAPAEKAAVMEAFSRNEVQLLVAT CEECCCCCEEHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHCCCCEEEEEEH TVIEVGVDVPNASLMVIEHAERFGLAQLHQLRGRVGRGTAASACVLMYSGPLSIAGRERL HHHHHCCCCCCCCEEEEECHHHCCHHHHHHHHCCCCCCCHHCEEEEEECCCCCCCCHHHH KTMRETNDGFEIARRDLEIRGPGEFLGARQSGAAMLRFADLERDGWLIEPAREAAGVLIA HHHHHCCCCHHHHHHCCEECCCHHHHCCCCCCCEEEEEEECCCCCCEECCCHHHCCEEEE RYPDVVTQHLARWLGAREQFLKA CCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]