Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is yceI [C]

Identifier: 238026270

GI number: 238026270

Start: 633390

End: 633968

Strand: Direct

Name: yceI [C]

Synonym: bglu_1g06030

Alternate gene names: 238026270

Gene position: 633390-633968 (Clockwise)

Preceding gene: 238026269

Following gene: 238026276

Centisome position: 16.21

GC content: 65.28

Gene sequence:

>579_bases
TTGAACAAGCCCCTGATGATGGCCGCCGGTGCGCTCGCCGCCGCCCTGTCGATCCCCGCGATGGCCGCGCCGGTGACCTA
CCAGTTGGACCCGAGCCACACCTACCCGAGCTTCGAGACCGACCACTTCGGCGGCCTGTCGGTGTGGCGCGGCAAGTTCG
ACGAGTCGAGCGGCACCGTGACGCTCGATCGCGCGGCCAAGACGGGCAGCGTCGAGGTGACCACCAAGATCGCGTCGATC
CACACCGGCAGCGCGAAGCTCGACGAGCACGTGCAGACGCCGGAATTCTTCGATGCGGCGAAGTACCCGGACGCGACCTA
CAAGGGCACCCTGAAGTTCGAGGGCGACAAGCCGGTGGCGGTGGTCGGCAACCTGACGCTGCACGGCGTGACCAAGCCGC
TGACGCTGAAGATCGACTCGTTCAAGTGCATGCAGCACCCGATGCTCAAGCGCGAGGTGTGCGGCGTGGACGCCGTCGGC
GAATTCAACCGCGACGAATTCGGCATCGACTACGGCAAGCAGTACGGCTTCAAGATGAAGACCAAGCTGCTGATCTCGGC
CGAAGGGGTCGCGCAGTAA

Upstream 100 bases:

>100_bases
TCAAGTTCCATCTCGTCGCCGCGAAGTGATCGCGCCGGCGAATCGTATCCGGGCACCGCGCTGCCGTGGCGCCCGTTCAA
CCGCAAACTAGGAGAATGAT

Downstream 100 bases:

>100_bases
GCCAGCCATAGCCATGGCCGGCGCCCGGCGCCGCAGGAACGCGTGATACCGCCGCGACCCGGCAACGGGCGCGGCGGTTT
TGCCGTTAACGAAGCCGCGC

Product: YceI-like family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 192; Mature: 192

Protein sequence:

>192_residues
MNKPLMMAAGALAAALSIPAMAAPVTYQLDPSHTYPSFETDHFGGLSVWRGKFDESSGTVTLDRAAKTGSVEVTTKIASI
HTGSAKLDEHVQTPEFFDAAKYPDATYKGTLKFEGDKPVAVVGNLTLHGVTKPLTLKIDSFKCMQHPMLKREVCGVDAVG
EFNRDEFGIDYGKQYGFKMKTKLLISAEGVAQ

Sequences:

>Translated_192_residues
MNKPLMMAAGALAAALSIPAMAAPVTYQLDPSHTYPSFETDHFGGLSVWRGKFDESSGTVTLDRAAKTGSVEVTTKIASI
HTGSAKLDEHVQTPEFFDAAKYPDATYKGTLKFEGDKPVAVVGNLTLHGVTKPLTLKIDSFKCMQHPMLKREVCGVDAVG
EFNRDEFGIDYGKQYGFKMKTKLLISAEGVAQ
>Mature_192_residues
MNKPLMMAAGALAAALSIPAMAAPVTYQLDPSHTYPSFETDHFGGLSVWRGKFDESSGTVTLDRAAKTGSVEVTTKIASI
HTGSAKLDEHVQTPEFFDAAKYPDATYKGTLKFEGDKPVAVVGNLTLHGVTKPLTLKIDSFKCMQHPMLKREVCGVDAVG
EFNRDEFGIDYGKQYGFKMKTKLLISAEGVAQ

Specific function: Unknown

COG id: COG2353

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0312 family. Type 1 subfamily [H]

Homologues:

Organism=Escherichia coli, GI1787295, Length=194, Percent_Identity=32.9896907216495, Blast_Score=79, Evalue=2e-16,

Paralogues:

None

Copy number: 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007372 [H]

Pfam domain/function: PF04264 YceI [H]

EC number: NA

Molecular weight: Translated: 20764; Mature: 20764

Theoretical pI: Translated: 7.14; Mature: 7.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKPLMMAAGALAAALSIPAMAAPVTYQLDPSHTYPSFETDHFGGLSVWRGKFDESSGTV
CCCCCEEHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEECCCCCCCCCCE
TLDRAAKTGSVEVTTKIASIHTGSAKLDEHVQTPEFFDAAKYPDATYKGTLKFEGDKPVA
EEECCCCCCCEEEEEEEEEEECCCCHHHHHCCCCCHHHHCCCCCCCEEEEEEECCCCCEE
VVGNLTLHGVTKPLTLKIDSFKCMQHPMLKREVCGVDAVGEFNRDEFGIDYGKQYGFKMK
EEECEEEECCCCCEEEEECCCHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEE
TKLLISAEGVAQ
EEEEEECCCCCC
>Mature Secondary Structure
MNKPLMMAAGALAAALSIPAMAAPVTYQLDPSHTYPSFETDHFGGLSVWRGKFDESSGTV
CCCCCEEHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEECCCCCCCCCCE
TLDRAAKTGSVEVTTKIASIHTGSAKLDEHVQTPEFFDAAKYPDATYKGTLKFEGDKPVA
EEECCCCCCCEEEEEEEEEEECCCCHHHHHCCCCCHHHHCCCCCCCEEEEEEECCCCCEE
VVGNLTLHGVTKPLTLKIDSFKCMQHPMLKREVCGVDAVGEFNRDEFGIDYGKQYGFKMK
EEECEEEECCCCCEEEEECCCHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEE
TKLLISAEGVAQ
EEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA