| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is queA [H]
Identifier: 238026275
GI number: 238026275
Start: 639236
End: 640288
Strand: Reverse
Name: queA [H]
Synonym: bglu_1g06080
Alternate gene names: 238026275
Gene position: 640288-639236 (Counterclockwise)
Preceding gene: 238026280
Following gene: 238026274
Centisome position: 16.39
GC content: 71.89
Gene sequence:
>1053_bases ATGTTCAAGCTTTCCGATTTCGATTTCGACCTGCCGCCCGAGTTGATCGCGCAGACGGCGCTGCCCGAGCGCAGCGCGAG CCGGCTCCTCGAGGTGGGCGGCACCGCCGGGCCCGCGCGGCTCGTGGATCGCCGCTTCACCGAGCTGCCCGACTGCCTCG CGGCCGGCGACCTGCTGGTCTTCAACGACACCAAGGTGCTCAAGGCGCGCTTCTTCGGCCAGAAGGCGAGCGGCGGCCGG ATCGAGGTGCTGATCGAGCGCGTGACCGGCCCGCGCACGGCGCTGGCGCAGATCCGCGCCAGCAAGAGCCCGGCGGCGGG CGCCACGCTGACGCTGGCCGACGCGTTCGAGGTGACGGTCGGCGAGCGCGTCGAGCCGTTCTTCACGCTGCATTTCCCCG ACGATTGCCTGACGCTGATCGAGCGGCACGGCCGCCTGCCGCTGCCGCCCTACATCGAGCACGATCCCGACGCGACCGAC GAGACGCGCTACCAGACCGTATTCGCCAGCAATCCGGGCGCGGTGGCCGCACCCACCGCCGGCCTGCACTTCGACGAGGC GCTGCTCGCCACGCTGCGCGCGCGCGGCGTCGAGACCGCCACGCTCACGCTGCACGTGGGCGCCGGCACCTTCCAGCCGG TGCGCGTCGACAACATCGCCGACCACCGGATGCACAGCGAGTGGTACGAGCTGACCGACGCGCTGGTTGAGCGGATCGCG GCCACCCGCGCGCGCGGCGGCCGCGTGATCGCGGTCGGCACCACCTCGATGCGCGCGCTGGAAGCGGCCGCGCGCGACGC CGAGGCGGCCGGCCGGCCGCTCGCGGCCACCCGCGCCGAGACCGACATCTTCATCACGCCGGGCTACCGGTTCCGCGTGG TGGACCGGCTCGTCACCAATTTCCATCTGCCGAAATCGACGCTGCTGATGCTGGTCTCGGCGTTCGCCGGCATCGAGCCG ATCCGCGCCGCCTACCGCCACGCGATCGCCGAACGCTACCGTTTCTTCAGCTACGGCGACGCGATGCTGCTCACGCGGCG CGAGCCCGACTGA
Upstream 100 bases:
>100_bases CGCGCGACCCCGCCATCATAGCGGCTCGCGCCGGCACTGCGCGGCATGCACGCCGCCGCGCCCCGGCGACGCACCGCGTC TGGTCCCCATTTCCCACTTC
Downstream 100 bases:
>100_bases CGCGGCCGTCCCCGGCCCTGCCCTTTTCCCGCCGCCGGCACGTTCACGCGCCGGCGGCATTCACCACCACTCGCAACGCG CGCCGGACTGTCTTCCGGTG
Product: S-adenosylmethionine:tRNA ribosyltransferase-isomerase
Products: NA
Alternate protein names: Queuosine biosynthesis protein queA [H]
Number of amino acids: Translated: 350; Mature: 350
Protein sequence:
>350_residues MFKLSDFDFDLPPELIAQTALPERSASRLLEVGGTAGPARLVDRRFTELPDCLAAGDLLVFNDTKVLKARFFGQKASGGR IEVLIERVTGPRTALAQIRASKSPAAGATLTLADAFEVTVGERVEPFFTLHFPDDCLTLIERHGRLPLPPYIEHDPDATD ETRYQTVFASNPGAVAAPTAGLHFDEALLATLRARGVETATLTLHVGAGTFQPVRVDNIADHRMHSEWYELTDALVERIA ATRARGGRVIAVGTTSMRALEAAARDAEAAGRPLAATRAETDIFITPGYRFRVVDRLVTNFHLPKSTLLMLVSAFAGIEP IRAAYRHAIAERYRFFSYGDAMLLTRREPD
Sequences:
>Translated_350_residues MFKLSDFDFDLPPELIAQTALPERSASRLLEVGGTAGPARLVDRRFTELPDCLAAGDLLVFNDTKVLKARFFGQKASGGR IEVLIERVTGPRTALAQIRASKSPAAGATLTLADAFEVTVGERVEPFFTLHFPDDCLTLIERHGRLPLPPYIEHDPDATD ETRYQTVFASNPGAVAAPTAGLHFDEALLATLRARGVETATLTLHVGAGTFQPVRVDNIADHRMHSEWYELTDALVERIA ATRARGGRVIAVGTTSMRALEAAARDAEAAGRPLAATRAETDIFITPGYRFRVVDRLVTNFHLPKSTLLMLVSAFAGIEP IRAAYRHAIAERYRFFSYGDAMLLTRREPD >Mature_350_residues MFKLSDFDFDLPPELIAQTALPERSASRLLEVGGTAGPARLVDRRFTELPDCLAAGDLLVFNDTKVLKARFFGQKASGGR IEVLIERVTGPRTALAQIRASKSPAAGATLTLADAFEVTVGERVEPFFTLHFPDDCLTLIERHGRLPLPPYIEHDPDATD ETRYQTVFASNPGAVAAPTAGLHFDEALLATLRARGVETATLTLHVGAGTFQPVRVDNIADHRMHSEWYELTDALVERIA ATRARGGRVIAVGTTSMRALEAAARDAEAAGRPLAATRAETDIFITPGYRFRVVDRLVTNFHLPKSTLLMLVSAFAGIEP IRAAYRHAIAERYRFFSYGDAMLLTRREPD
Specific function: Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) [H]
COG id: COG0809
COG function: function code J; S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the queA family [H]
Homologues:
Organism=Escherichia coli, GI1786606, Length=348, Percent_Identity=54.0229885057471, Blast_Score=353, Evalue=6e-99,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003699 [H]
Pfam domain/function: PF02547 Queuosine_synth [H]
EC number: 5.-.-.- [C]
Molecular weight: Translated: 38341; Mature: 38341
Theoretical pI: Translated: 6.61; Mature: 6.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFKLSDFDFDLPPELIAQTALPERSASRLLEVGGTAGPARLVDRRFTELPDCLAAGDLLV CCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCHHHHHCCCEEE FNDTKVLKARFFGQKASGGRIEVLIERVTGPRTALAQIRASKSPAAGATLTLADAFEVTV ECCCHHHHHHHCCCCCCCCEEEEEEEHHCCCHHHHHHHHCCCCCCCCCEEEEECCEEECC GERVEPFFTLHFPDDCLTLIERHGRLPLPPYIEHDPDATDETRYQTVFASNPGAVAAPTA CCCCCCEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEECCCC GLHFDEALLATLRARGVETATLTLHVGAGTFQPVRVDNIADHRMHSEWYELTDALVERIA CCCHHHHHHHHHHHCCCEEEEEEEEECCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHH ATRARGGRVIAVGTTSMRALEAAARDAEAAGRPLAATRAETDIFITPGYRFRVVDRLVTN HHHCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCEECCCCCEEEECCCCHHHHHHHHHHH FHLPKSTLLMLVSAFAGIEPIRAAYRHAIAERYRFFSYGDAMLLTRREPD CCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCC >Mature Secondary Structure MFKLSDFDFDLPPELIAQTALPERSASRLLEVGGTAGPARLVDRRFTELPDCLAAGDLLV CCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCHHHHHCCCEEE FNDTKVLKARFFGQKASGGRIEVLIERVTGPRTALAQIRASKSPAAGATLTLADAFEVTV ECCCHHHHHHHCCCCCCCCEEEEEEEHHCCCHHHHHHHHCCCCCCCCCEEEEECCEEECC GERVEPFFTLHFPDDCLTLIERHGRLPLPPYIEHDPDATDETRYQTVFASNPGAVAAPTA CCCCCCEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEECCCC GLHFDEALLATLRARGVETATLTLHVGAGTFQPVRVDNIADHRMHSEWYELTDALVERIA CCCHHHHHHHHHHHCCCEEEEEEEEECCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHH ATRARGGRVIAVGTTSMRALEAAARDAEAAGRPLAATRAETDIFITPGYRFRVVDRLVTN HHHCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCEECCCCCEEEECCCCHHHHHHHHHHH FHLPKSTLLMLVSAFAGIEPIRAAYRHAIAERYRFFSYGDAMLLTRREPD CCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Isomerases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA