| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238026244
Identifier: 238026244
GI number: 238026244
Start: 605906
End: 606982
Strand: Reverse
Name: 238026244
Synonym: bglu_1g05770
Alternate gene names: NA
Gene position: 606982-605906 (Counterclockwise)
Preceding gene: 238026245
Following gene: 238026243
Centisome position: 15.54
GC content: 75.86
Gene sequence:
>1077_bases ATGCCCCGCCCGCCCAGCCACGCAGCCGCCCAGCCGCAAGCAAGCGGGCTTGCGCAGCGCCTGCGCGCGCGGCTCGCGGG CGGCGTGACGCTGTTGACCACGGGCGGCGGCGGGCCGTCGATCGACTATGCCGCGCCGCCGGGCGATCCGGGCCTGTTCG GCCCCGAGGCGGTCTGCTGGCGCGTCCACGCCGATTTCACCTCGATGATGACGGGCGGCATCGCCGCGCTGCTGCTGCAA GCGCTGCACCCGCTCGCGCTGGCCGGCGTCTGGGACCATTCCACGTTCCGCACCGACATCCTTGGCCGGCTGCGCCGTAC CGCGACCTTCGTGGCCGGCACCACGTTCGGCAGCCGCGCCGACGCGCTCGCCCTGATCGAGCGCGTGAAGACGATCCACG CCGCGGTGACGGGCACCGCACCGGACGGGCGACCCTATCGCGCGAGCGATCCGGCACTGCTGACCTGGGTCCATGTGGCC GAGGTGTCGAGCTTCCTCGCCGCGTATCTGCGCTATGTGAACCCTGCGCTGTCCGGCCCCGAGCAGGATCGCTACTACGC CGAGACCGCGCTGATCGCGACGCTGCTCGGCGCGCGCGACGTGCCGGCCTCGCGCGCCGCAGTGGCCGCCTATCTGGCGC GCATGCGCGGCGAACTGGCCGCCAGCGAGCGCACGCGCGAGGTGATCCGCGTGCTGCGCGACGCGCCGGTGCCGCGCGCG TCGATGAAGCCGGCGGCCGCGCTGCTGTTCCACGCCGGCATCGACCTGTTGCCGGACTGGGCGCAGCGCCAGCTCGACCT CGCCTCGCTCGCGCCGGTGCGGCGCGTGGTGGCGCGGCCCGGCATTCGTCTGATCGCGCCGGTGTTTCGCTGGGCGCTCG TCAATGGCGCGTCGAAGCGCGCCCGGCGGCGCGCGGCGGCGGCGCCGGACGCCGTCATGACGCCGACGGCCTCCACCCCG GCCGCGCCGCAGCGGCCGCCGCCGGCGAACTCCGGCGACGCGCCAGGCGCCCGCGATCCCGCCCGCGCACAGCATTCGGC CGCCGACGCCGCCGGTGAGCCGCCCGGACCACGCTGA
Upstream 100 bases:
>100_bases ACCTATCGCCACTTCGGGCTGCCGGTGCCCGACAGCCACACGCCGGGGCTCCCGGGCATCGACGACGACACGCGGCGCTA GGCCGCCCGGAATCCGCACG
Downstream 100 bases:
>100_bases GCCGCCCGTCCTGCCGGCGGCGGAGCCCAGGCACCGCGCGGGCCAAGCCATCTGGCCGGCGCCCTCGGACTCGCGATTGT CATCGCACCGATATCGAGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 358; Mature: 357
Protein sequence:
>358_residues MPRPPSHAAAQPQASGLAQRLRARLAGGVTLLTTGGGGPSIDYAAPPGDPGLFGPEAVCWRVHADFTSMMTGGIAALLLQ ALHPLALAGVWDHSTFRTDILGRLRRTATFVAGTTFGSRADALALIERVKTIHAAVTGTAPDGRPYRASDPALLTWVHVA EVSSFLAAYLRYVNPALSGPEQDRYYAETALIATLLGARDVPASRAAVAAYLARMRGELAASERTREVIRVLRDAPVPRA SMKPAAALLFHAGIDLLPDWAQRQLDLASLAPVRRVVARPGIRLIAPVFRWALVNGASKRARRRAAAAPDAVMTPTASTP AAPQRPPPANSGDAPGARDPARAQHSAADAAGEPPGPR
Sequences:
>Translated_358_residues MPRPPSHAAAQPQASGLAQRLRARLAGGVTLLTTGGGGPSIDYAAPPGDPGLFGPEAVCWRVHADFTSMMTGGIAALLLQ ALHPLALAGVWDHSTFRTDILGRLRRTATFVAGTTFGSRADALALIERVKTIHAAVTGTAPDGRPYRASDPALLTWVHVA EVSSFLAAYLRYVNPALSGPEQDRYYAETALIATLLGARDVPASRAAVAAYLARMRGELAASERTREVIRVLRDAPVPRA SMKPAAALLFHAGIDLLPDWAQRQLDLASLAPVRRVVARPGIRLIAPVFRWALVNGASKRARRRAAAAPDAVMTPTASTP AAPQRPPPANSGDAPGARDPARAQHSAADAAGEPPGPR >Mature_357_residues PRPPSHAAAQPQASGLAQRLRARLAGGVTLLTTGGGGPSIDYAAPPGDPGLFGPEAVCWRVHADFTSMMTGGIAALLLQA LHPLALAGVWDHSTFRTDILGRLRRTATFVAGTTFGSRADALALIERVKTIHAAVTGTAPDGRPYRASDPALLTWVHVAE VSSFLAAYLRYVNPALSGPEQDRYYAETALIATLLGARDVPASRAAVAAYLARMRGELAASERTREVIRVLRDAPVPRAS MKPAAALLFHAGIDLLPDWAQRQLDLASLAPVRRVVARPGIRLIAPVFRWALVNGASKRARRRAAAAPDAVMTPTASTPA APQRPPPANSGDAPGARDPARAQHSAADAAGEPPGPR
Specific function: Unknown
COG id: COG3662
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37567; Mature: 37436
Theoretical pI: Translated: 11.42; Mature: 11.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRPPSHAAAQPQASGLAQRLRARLAGGVTLLTTGGGGPSIDYAAPPGDPGLFGPEAVCW CCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEE RVHADFTSMMTGGIAALLLQALHPLALAGVWDHSTFRTDILGRLRRTATFVAGTTFGSRA EEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHH DALALIERVKTIHAAVTGTAPDGRPYRASDPALLTWVHVAEVSSFLAAYLRYVNPALSGP HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC EQDRYYAETALIATLLGARDVPASRAAVAAYLARMRGELAASERTREVIRVLRDAPVPRA CCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC SMKPAAALLFHAGIDLLPDWAQRQLDLASLAPVRRVVARPGIRLIAPVFRWALVNGASKR CCCHHHHHHHHHCCHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHH ARRRAAAAPDAVMTPTASTPAAPQRPPPANSGDAPGARDPARAQHSAADAAGEPPGPR HHHHHHCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure PRPPSHAAAQPQASGLAQRLRARLAGGVTLLTTGGGGPSIDYAAPPGDPGLFGPEAVCW CCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEE RVHADFTSMMTGGIAALLLQALHPLALAGVWDHSTFRTDILGRLRRTATFVAGTTFGSRA EEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHH DALALIERVKTIHAAVTGTAPDGRPYRASDPALLTWVHVAEVSSFLAAYLRYVNPALSGP HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC EQDRYYAETALIATLLGARDVPASRAAVAAYLARMRGELAASERTREVIRVLRDAPVPRA CCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC SMKPAAALLFHAGIDLLPDWAQRQLDLASLAPVRRVVARPGIRLIAPVFRWALVNGASKR CCCHHHHHHHHHCCHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHH ARRRAAAAPDAVMTPTASTPAAPQRPPPANSGDAPGARDPARAQHSAADAAGEPPGPR HHHHHHCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA