| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238026243
Identifier: 238026243
GI number: 238026243
Start: 604624
End: 605718
Strand: Reverse
Name: 238026243
Synonym: bglu_1g05760
Alternate gene names: NA
Gene position: 605718-604624 (Counterclockwise)
Preceding gene: 238026244
Following gene: 238026239
Centisome position: 15.51
GC content: 71.32
Gene sequence:
>1095_bases ATGCCTGCTGCTTCGCTCAGCCGTTTTGCCCTGGCCGCCCCGCTCTGCTCGCTGCTCGCGCTCGCCGCCTGCGGCGGCGC CACGTCCGCCGCTGCACCCGCCGCCGCATCCGCCGCCGTTCGGCAGCCGGCTGCCACGGCGGTACAGCCGCTGCCCGGCA AGTGGGCCGCGGCCGCCGCCGGTCAGATGCTCGATGTCGCGCTCGGCGATCTGCACCCGACCCAAGCGGCGCTCGGCTAT GACCAGATCTACTACAAGCTCGGCCGCTACGAGCGCGATCCGCTCCGGAAATTCGACGACTTCTGCGCCGACGAGGGCCT TGGCGGCCTGAGGAAGAACGGCGCCTCGCCCCGCTCGACGCTGACCAATGCGGCGAGCTACGCCTGCACGACCACCGACC CGCGCCAGCGCGACACCAGCGTGCTGAACCCGGTGGTGGTCGGCCCGAACGGCGACACGCTGTACCTGACGGACGGCCAT CACGGCCTGTCGACCTACTACGAGGTGCCCGGCGGCGGTCCGACGCTGCATGTGCACGTGCTCGTCAAGGACAACCTGAG CGGCTACTCCGGCAGCGCGTTCTGGGCACAGATGCAACGCCGCGGCTACACGCGCCTGAAGGACGCGAACGGCGCCGCGA TCACGCCGGCGCAACTGCCCACCGGGCTCGGCCTCGAGCTCGGCATGCAGGACGACGTCTATCGCTCGCTCGTCTACTTC ACGCGCGGGATCGGCTACCGCAAGCCGACGTCGCCCACCGATTTCCTCGAGTTCTACTGGGCCGACTGGCTGCGGGCGAG GTTCCCGCTGTCGGGCTACACGCTCGCGAAGCTCGGCGCGACCGCCCCCGATCCGGCCACGGCCGACACCGGCTATCTGA ACGCCATCTGGAACGCGTCGCGGCGCATGGTCGGGGCTGCCGACCCGGTGATCGACGGCAAGACCGGCGCCGATCTCGGC CGGCTCGCGCGGCTCAACGCCGGCAGGCAATACACGACGGGAGCGTTCGGCGAGCTGAGCGCGCCGCTCACGGCGGCCAA GCCGGGCAAGCTCGCCTACGCGCTCGCCTACAAGGCGCGCCACGGCCTGCCGTGA
Upstream 100 bases:
>100_bases CCGATATCGAGTCACCATCACGCTGCGGCGGCACGCTTGCACCGCTGCTCGCGCCGCTACCCGCAGCGGCGCCCTGCCCA TTTTCACGTCCGCTCTCACG
Downstream 100 bases:
>100_bases ACCGCGCAGGGGCGGCAGGAACGGCACCGCACCACGGCACCGCGAGCGCGGGGCCGTGATCGTCTACAGCACCTTGCGGT AGCCGTCGTCGTCGCTGTCG
Product: putative lipoprotein
Products: NA
Alternate protein names: ParB-Like Nuclease Family Protein; ParB-Like Nuclease
Number of amino acids: Translated: 364; Mature: 363
Protein sequence:
>364_residues MPAASLSRFALAAPLCSLLALAACGGATSAAAPAAASAAVRQPAATAVQPLPGKWAAAAAGQMLDVALGDLHPTQAALGY DQIYYKLGRYERDPLRKFDDFCADEGLGGLRKNGASPRSTLTNAASYACTTTDPRQRDTSVLNPVVVGPNGDTLYLTDGH HGLSTYYEVPGGGPTLHVHVLVKDNLSGYSGSAFWAQMQRRGYTRLKDANGAAITPAQLPTGLGLELGMQDDVYRSLVYF TRGIGYRKPTSPTDFLEFYWADWLRARFPLSGYTLAKLGATAPDPATADTGYLNAIWNASRRMVGAADPVIDGKTGADLG RLARLNAGRQYTTGAFGELSAPLTAAKPGKLAYALAYKARHGLP
Sequences:
>Translated_364_residues MPAASLSRFALAAPLCSLLALAACGGATSAAAPAAASAAVRQPAATAVQPLPGKWAAAAAGQMLDVALGDLHPTQAALGY DQIYYKLGRYERDPLRKFDDFCADEGLGGLRKNGASPRSTLTNAASYACTTTDPRQRDTSVLNPVVVGPNGDTLYLTDGH HGLSTYYEVPGGGPTLHVHVLVKDNLSGYSGSAFWAQMQRRGYTRLKDANGAAITPAQLPTGLGLELGMQDDVYRSLVYF TRGIGYRKPTSPTDFLEFYWADWLRARFPLSGYTLAKLGATAPDPATADTGYLNAIWNASRRMVGAADPVIDGKTGADLG RLARLNAGRQYTTGAFGELSAPLTAAKPGKLAYALAYKARHGLP >Mature_363_residues PAASLSRFALAAPLCSLLALAACGGATSAAAPAAASAAVRQPAATAVQPLPGKWAAAAAGQMLDVALGDLHPTQAALGYD QIYYKLGRYERDPLRKFDDFCADEGLGGLRKNGASPRSTLTNAASYACTTTDPRQRDTSVLNPVVVGPNGDTLYLTDGHH GLSTYYEVPGGGPTLHVHVLVKDNLSGYSGSAFWAQMQRRGYTRLKDANGAAITPAQLPTGLGLELGMQDDVYRSLVYFT RGIGYRKPTSPTDFLEFYWADWLRARFPLSGYTLAKLGATAPDPATADTGYLNAIWNASRRMVGAADPVIDGKTGADLGR LARLNAGRQYTTGAFGELSAPLTAAKPGKLAYALAYKARHGLP
Specific function: Unknown
COG id: COG4318
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38344; Mature: 38212
Theoretical pI: Translated: 9.27; Mature: 9.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAASLSRFALAAPLCSLLALAACGGATSAAAPAAASAAVRQPAATAVQPLPGKWAAAAA CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCHHHHCCCCCCCHHHHHH GQMLDVALGDLHPTQAALGYDQIYYKLGRYERDPLRKFDDFCADEGLGGLRKNGASPRST CHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHCCCCCHHH LTNAASYACTTTDPRQRDTSVLNPVVVGPNGDTLYLTDGHHGLSTYYEVPGGGPTLHVHV HHHHHHEEECCCCCCHHHHHHCCCEEECCCCCEEEEECCCCCCCEEEECCCCCCEEEEEE LVKDNLSGYSGSAFWAQMQRRGYTRLKDANGAAITPAQLPTGLGLELGMQDDVYRSLVYF EEECCCCCCCCHHHHHHHHHCCCCEEECCCCCEECHHHCCCCCCCEECCCHHHHHHHHHH TRGIGYRKPTSPTDFLEFYWADWLRARFPLSGYTLAKLGATAPDPATADTGYLNAIWNAS HHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHH RRMVGAADPVIDGKTGADLGRLARLNAGRQYTTGAFGELSAPLTAAKPGKLAYALAYKAR HHCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHH HGLP CCCC >Mature Secondary Structure PAASLSRFALAAPLCSLLALAACGGATSAAAPAAASAAVRQPAATAVQPLPGKWAAAAA CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCHHHHCCCCCCCHHHHHH GQMLDVALGDLHPTQAALGYDQIYYKLGRYERDPLRKFDDFCADEGLGGLRKNGASPRST CHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHCCCCCHHH LTNAASYACTTTDPRQRDTSVLNPVVVGPNGDTLYLTDGHHGLSTYYEVPGGGPTLHVHV HHHHHHEEECCCCCCHHHHHHCCCEEECCCCCEEEEECCCCCCCEEEECCCCCCEEEEEE LVKDNLSGYSGSAFWAQMQRRGYTRLKDANGAAITPAQLPTGLGLELGMQDDVYRSLVYF EEECCCCCCCCHHHHHHHHHCCCCEEECCCCCEECHHHCCCCCCCEECCCHHHHHHHHHH TRGIGYRKPTSPTDFLEFYWADWLRARFPLSGYTLAKLGATAPDPATADTGYLNAIWNAS HHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHH RRMVGAADPVIDGKTGADLGRLARLNAGRQYTTGAFGELSAPLTAAKPGKLAYALAYKAR HHCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHH HGLP CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA