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The map label for this gene is ruvB [H]

Identifier: 238026245

GI number: 238026245

Start: 607002

End: 608069

Strand: Reverse

Name: ruvB [H]

Synonym: bglu_1g05780

Alternate gene names: 238026245

Gene position: 608069-607002 (Counterclockwise)

Preceding gene: 238026246

Following gene: 238026244

Centisome position: 15.57

GC content: 69.76

Gene sequence:

>1068_bases
ATGATCGAAACCGACAAACTCGCCGGCGAGCGCATCATCGCCGCCACGCCCGCCTCGTCGCACGAGGAGGCGTTCGAACG
CGCGCTGCGGCCGCGCCAGCTTGACGAATATGTCGGCCAGGAAAAGGTGCGCGGCCAGCTCGAGATTTTCATCGAGGCCG
CCAAGCGCCGCGCCGAGGCACTCGATCACGTGCTGCTGTTCGGGCCGCCCGGCCTCGGCAAGACCACGCTCGCACACATC
GTCGCACGCGAGATGGGCGTCAACCTGCGGCAGACTTCCGGCCCGGTGCTGGAGCGCCCGGGCGACCTTGCCGCGCTGCT
CACCAACCTCGAAGCGAACGACGTGCTGTTCATCGACGAGATCCACCGGCTCTCGCCCGTCGTCGAGGAAATCCTGTACC
CGGCGCTCGAGGACTACCAGATCGACATCATGATCGGCGAGGGGCCGGCCGCGCGCAGCGTCAAGCTCGACCTGCAGCCG
TTCACGCTGGTCGGCGCCACCACGCGCGCCGGCATGCTGACCAACCCGCTGCGCGACCGCTTCGGGATCGTCGCACGGCT
CGAGTTCTACGACGCCAGCCAGCTGTCGCGCATCGTGCAGCGCTCGGCCTCGCTGCTCAACGCGCGCATCGATCCGCACG
GTGCACTGGAGATCGCGCGCCGCGCGCGCGGCACGCCGCGGATCGCCAACCGGCTGCTGCGCCGCGTGCGCGACTACGCC
GAAGTGAAGGCCGACGGCGAGATCACCGAGCGCGTCGCCGATGCCGCGCTCGCGATGCTCGACGTCGATCCGGTCGGCTT
CGACCTGATGGACCGCAAGCTGCTCGAGGCGATCCTGCACAAGTTCGACGGCGGCCCGGTGGGCGTGGACAACCTGGCCG
CCGCGATCGGCGAGGAACGCGACACCATCGAGGACGTGCTCGAACCCTATCTGATCCAGCAGGGCTTCCTGCAGCGCACG
CCGCGCGGGCGCGTCGCCACGCTGCTCACCTATCGCCACTTCGGGCTGCCGGTGCCCGACAGCCACACGCCGGGGCTCCC
GGGCATCGACGACGACACGCGGCGCTAG

Upstream 100 bases:

>100_bases
GCGGGCGAGCCGTGCGGCTACTGTCCCATCTGCGGGCGCGCCGCGCGAGTCGGCCGTTCGGCCGGTTCGTCGGCTCGGTT
GCGCGCGGTACAATGCCCGC

Downstream 100 bases:

>100_bases
GCCGCCCGGAATCCGCACGATGCCCCGCCCGCCCAGCCACGCAGCCGCCCAGCCGCAAGCAAGCGGGCTTGCGCAGCGCC
TGCGCGCGCGGCTCGCGGGC

Product: Holliday junction DNA helicase RuvB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 355; Mature: 355

Protein sequence:

>355_residues
MIETDKLAGERIIAATPASSHEEAFERALRPRQLDEYVGQEKVRGQLEIFIEAAKRRAEALDHVLLFGPPGLGKTTLAHI
VAREMGVNLRQTSGPVLERPGDLAALLTNLEANDVLFIDEIHRLSPVVEEILYPALEDYQIDIMIGEGPAARSVKLDLQP
FTLVGATTRAGMLTNPLRDRFGIVARLEFYDASQLSRIVQRSASLLNARIDPHGALEIARRARGTPRIANRLLRRVRDYA
EVKADGEITERVADAALAMLDVDPVGFDLMDRKLLEAILHKFDGGPVGVDNLAAAIGEERDTIEDVLEPYLIQQGFLQRT
PRGRVATLLTYRHFGLPVPDSHTPGLPGIDDDTRR

Sequences:

>Translated_355_residues
MIETDKLAGERIIAATPASSHEEAFERALRPRQLDEYVGQEKVRGQLEIFIEAAKRRAEALDHVLLFGPPGLGKTTLAHI
VAREMGVNLRQTSGPVLERPGDLAALLTNLEANDVLFIDEIHRLSPVVEEILYPALEDYQIDIMIGEGPAARSVKLDLQP
FTLVGATTRAGMLTNPLRDRFGIVARLEFYDASQLSRIVQRSASLLNARIDPHGALEIARRARGTPRIANRLLRRVRDYA
EVKADGEITERVADAALAMLDVDPVGFDLMDRKLLEAILHKFDGGPVGVDNLAAAIGEERDTIEDVLEPYLIQQGFLQRT
PRGRVATLLTYRHFGLPVPDSHTPGLPGIDDDTRR
>Mature_355_residues
MIETDKLAGERIIAATPASSHEEAFERALRPRQLDEYVGQEKVRGQLEIFIEAAKRRAEALDHVLLFGPPGLGKTTLAHI
VAREMGVNLRQTSGPVLERPGDLAALLTNLEANDVLFIDEIHRLSPVVEEILYPALEDYQIDIMIGEGPAARSVKLDLQP
FTLVGATTRAGMLTNPLRDRFGIVARLEFYDASQLSRIVQRSASLLNARIDPHGALEIARRARGTPRIANRLLRRVRDYA
EVKADGEITERVADAALAMLDVDPVGFDLMDRKLLEAILHKFDGGPVGVDNLAAAIGEERDTIEDVLEPYLIQQGFLQRT
PRGRVATLLTYRHFGLPVPDSHTPGLPGIDDDTRR

Specific function: The ruvA-ruvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is an helicase that mediates the Holliday

COG id: COG2255

COG function: function code L; Holliday junction resolvasome, helicase subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ruvB family [H]

Homologues:

Organism=Escherichia coli, GI1788167, Length=340, Percent_Identity=71.1764705882353, Blast_Score=473, Evalue=1e-135,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR004605
- InterPro:   IPR008823
- InterPro:   IPR008824
- InterPro:   IPR011991
- ProDom:   PD005323 [H]

Pfam domain/function: PF05491 RuvB_C; PF05496 RuvB_N [H]

EC number: =3.6.4.12 [H]

Molecular weight: Translated: 39260; Mature: 39260

Theoretical pI: Translated: 5.20; Mature: 5.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIETDKLAGERIIAATPASSHEEAFERALRPRQLDEYVGQEKVRGQLEIFIEAAKRRAEA
CCCCCHHCCCEEEEECCCCCHHHHHHHHCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
LDHVLLFGPPGLGKTTLAHIVAREMGVNLRQTSGPVLERPGDLAALLTNLEANDVLFIDE
HCEEEEECCCCCCHHHHHHHHHHHHCCCEECCCCCCCCCCCHHHHHHHCCCCCCEEEHHH
IHRLSPVVEEILYPALEDYQIDIMIGEGPAARSVKLDLQPFTLVGATTRAGMLTNPLRDR
HHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEEEECCCEEEECCCHHCCHHHHHHHHH
FGIVARLEFYDASQLSRIVQRSASLLNARIDPHGALEIARRARGTPRIANRLLRRVRDYA
HCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHH
EVKADGEITERVADAALAMLDVDPVGFDLMDRKLLEAILHKFDGGPVGVDNLAAAIGEER
HHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCH
DTIEDVLEPYLIQQGFLQRTPRGRVATLLTYRHFGLPVPDSHTPGLPGIDDDTRR
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MIETDKLAGERIIAATPASSHEEAFERALRPRQLDEYVGQEKVRGQLEIFIEAAKRRAEA
CCCCCHHCCCEEEEECCCCCHHHHHHHHCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
LDHVLLFGPPGLGKTTLAHIVAREMGVNLRQTSGPVLERPGDLAALLTNLEANDVLFIDE
HCEEEEECCCCCCHHHHHHHHHHHHCCCEECCCCCCCCCCCHHHHHHHCCCCCCEEEHHH
IHRLSPVVEEILYPALEDYQIDIMIGEGPAARSVKLDLQPFTLVGATTRAGMLTNPLRDR
HHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEEEECCCEEEECCCHHCCHHHHHHHHH
FGIVARLEFYDASQLSRIVQRSASLLNARIDPHGALEIARRARGTPRIANRLLRRVRDYA
HCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHH
EVKADGEITERVADAALAMLDVDPVGFDLMDRKLLEAILHKFDGGPVGVDNLAAAIGEER
HHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCH
DTIEDVLEPYLIQQGFLQRTPRGRVATLLTYRHFGLPVPDSHTPGLPGIDDDTRR
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA