Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is yqiA [H]

Identifier: 238026181

GI number: 238026181

Start: 539321

End: 539899

Strand: Direct

Name: yqiA [H]

Synonym: bglu_1g05120

Alternate gene names: 238026181

Gene position: 539321-539899 (Clockwise)

Preceding gene: 238026180

Following gene: 238026182

Centisome position: 13.81

GC content: 71.33

Gene sequence:

>579_bases
GTGATTCTCTATCTGCACGGCTTTCGCTCGTCGCCGCGTTCCTACAAGTCGCGCCTGCTTGCCGAGCGGCTTGCCGCGCT
CGGCCGCGAGGCCGAATGGCGCTGCCCGATGCTGGCGGTCTCGCCGCTCGAGGCAGTGGCGCTGGCCGAGTCGGAGGTGG
CGGGCGCCGCGCCGCACGAGGTGACGGTGATCGGCAGCTCGCTCGGCGGCTATTACGCCACCTGGCTGGCCGAGAAGCAC
GGCTGGCGCGCGGTGCTGCTGAATCCGGCCACCGTGCCGCAGCGCGACCTCGCCCAGTATCTGGGCGAGCAGCCGCTCTG
GCACGGCGGCGGCAGCGTCGTCGTCGAGCCGCGCCATCTCGCCGAGCTCGACGCGCTGCGCGTGCCGGCGGTGACGCGCC
CGGAGCGCTACTATCTGATCGCCGCGACGGGCGACGAGGTGCTCGATTATCGCGAGATGCTGGCGCATTATCCGGGCGCG
CGGACCCGCGTGATCGAAGGCAGCGACCACGGCATCAGCGAATTCGCCGACTACGTCGACGACGTGCTCGCGTTCTGCGA
CGCCGTGCCGGCGCGCTGA

Upstream 100 bases:

>100_bases
AGATCCTCGTGATGAGCAACGGCGGCTTCGGCGGGGTCCACCAGAAGCTGCTCGACGCGCTGTCGGCGCGCGGTGCCGCC
CACGGCGCGGAGGACCGCGC

Downstream 100 bases:

>100_bases
CGGGCCGCCCGCCGGCCGGCCCGACGGGCGCGGCCGGCCGCTGACGACGCAATTCAATCCAATCCGGACGAGGGCGCCGC
GAGGCGGCGCCGGACAGTCT

Product: esterase YqiA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 192; Mature: 192

Protein sequence:

>192_residues
MILYLHGFRSSPRSYKSRLLAERLAALGREAEWRCPMLAVSPLEAVALAESEVAGAAPHEVTVIGSSLGGYYATWLAEKH
GWRAVLLNPATVPQRDLAQYLGEQPLWHGGGSVVVEPRHLAELDALRVPAVTRPERYYLIAATGDEVLDYREMLAHYPGA
RTRVIEGSDHGISEFADYVDDVLAFCDAVPAR

Sequences:

>Translated_192_residues
MILYLHGFRSSPRSYKSRLLAERLAALGREAEWRCPMLAVSPLEAVALAESEVAGAAPHEVTVIGSSLGGYYATWLAEKH
GWRAVLLNPATVPQRDLAQYLGEQPLWHGGGSVVVEPRHLAELDALRVPAVTRPERYYLIAATGDEVLDYREMLAHYPGA
RTRVIEGSDHGISEFADYVDDVLAFCDAVPAR
>Mature_192_residues
MILYLHGFRSSPRSYKSRLLAERLAALGREAEWRCPMLAVSPLEAVALAESEVAGAAPHEVTVIGSSLGGYYATWLAEKH
GWRAVLLNPATVPQRDLAQYLGEQPLWHGGGSVVVEPRHLAELDALRVPAVTRPERYYLIAATGDEVLDYREMLAHYPGA
RTRVIEGSDHGISEFADYVDDVLAFCDAVPAR

Specific function: Displays esterase activity toward palmitoyl-CoA and pNP- butyrate [H]

COG id: COG3150

COG function: function code R; Predicted esterase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789409, Length=184, Percent_Identity=41.304347826087, Blast_Score=141, Evalue=2e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008886 [H]

Pfam domain/function: PF05728 UPF0227 [H]

EC number: NA

Molecular weight: Translated: 21110; Mature: 21110

Theoretical pI: Translated: 5.57; Mature: 5.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILYLHGFRSSPRSYKSRLLAERLAALGREAEWRCPMLAVSPLEAVALAESEVAGAAPHE
CEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCHHHHHHHHHHHCCCCCCE
VTVIGSSLGGYYATWLAEKHGWRAVLLNPATVPQRDLAQYLGEQPLWHGGGSVVVEPRHL
EEEEECCCCHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHCCCCEEECCCEEEECCHHH
AELDALRVPAVTRPERYYLIAATGDEVLDYREMLAHYPGARTRVIEGSDHGISEFADYVD
HHHHHHCCCCCCCCCEEEEEEECCHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHH
DVLAFCDAVPAR
HHHHHHHCCCCC
>Mature Secondary Structure
MILYLHGFRSSPRSYKSRLLAERLAALGREAEWRCPMLAVSPLEAVALAESEVAGAAPHE
CEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCHHHHHHHHHHHCCCCCCE
VTVIGSSLGGYYATWLAEKHGWRAVLLNPATVPQRDLAQYLGEQPLWHGGGSVVVEPRHL
EEEEECCCCHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHCCCCEEECCCEEEECCHHH
AELDALRVPAVTRPERYYLIAATGDEVLDYREMLAHYPGARTRVIEGSDHGISEFADYVD
HHHHHHCCCCCCCCCEEEEEEECCHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHH
DVLAFCDAVPAR
HHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]