| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
Click here to switch to the map view.
The map label for this gene is yqiA [H]
Identifier: 238026181
GI number: 238026181
Start: 539321
End: 539899
Strand: Direct
Name: yqiA [H]
Synonym: bglu_1g05120
Alternate gene names: 238026181
Gene position: 539321-539899 (Clockwise)
Preceding gene: 238026180
Following gene: 238026182
Centisome position: 13.81
GC content: 71.33
Gene sequence:
>579_bases GTGATTCTCTATCTGCACGGCTTTCGCTCGTCGCCGCGTTCCTACAAGTCGCGCCTGCTTGCCGAGCGGCTTGCCGCGCT CGGCCGCGAGGCCGAATGGCGCTGCCCGATGCTGGCGGTCTCGCCGCTCGAGGCAGTGGCGCTGGCCGAGTCGGAGGTGG CGGGCGCCGCGCCGCACGAGGTGACGGTGATCGGCAGCTCGCTCGGCGGCTATTACGCCACCTGGCTGGCCGAGAAGCAC GGCTGGCGCGCGGTGCTGCTGAATCCGGCCACCGTGCCGCAGCGCGACCTCGCCCAGTATCTGGGCGAGCAGCCGCTCTG GCACGGCGGCGGCAGCGTCGTCGTCGAGCCGCGCCATCTCGCCGAGCTCGACGCGCTGCGCGTGCCGGCGGTGACGCGCC CGGAGCGCTACTATCTGATCGCCGCGACGGGCGACGAGGTGCTCGATTATCGCGAGATGCTGGCGCATTATCCGGGCGCG CGGACCCGCGTGATCGAAGGCAGCGACCACGGCATCAGCGAATTCGCCGACTACGTCGACGACGTGCTCGCGTTCTGCGA CGCCGTGCCGGCGCGCTGA
Upstream 100 bases:
>100_bases AGATCCTCGTGATGAGCAACGGCGGCTTCGGCGGGGTCCACCAGAAGCTGCTCGACGCGCTGTCGGCGCGCGGTGCCGCC CACGGCGCGGAGGACCGCGC
Downstream 100 bases:
>100_bases CGGGCCGCCCGCCGGCCGGCCCGACGGGCGCGGCCGGCCGCTGACGACGCAATTCAATCCAATCCGGACGAGGGCGCCGC GAGGCGGCGCCGGACAGTCT
Product: esterase YqiA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 192; Mature: 192
Protein sequence:
>192_residues MILYLHGFRSSPRSYKSRLLAERLAALGREAEWRCPMLAVSPLEAVALAESEVAGAAPHEVTVIGSSLGGYYATWLAEKH GWRAVLLNPATVPQRDLAQYLGEQPLWHGGGSVVVEPRHLAELDALRVPAVTRPERYYLIAATGDEVLDYREMLAHYPGA RTRVIEGSDHGISEFADYVDDVLAFCDAVPAR
Sequences:
>Translated_192_residues MILYLHGFRSSPRSYKSRLLAERLAALGREAEWRCPMLAVSPLEAVALAESEVAGAAPHEVTVIGSSLGGYYATWLAEKH GWRAVLLNPATVPQRDLAQYLGEQPLWHGGGSVVVEPRHLAELDALRVPAVTRPERYYLIAATGDEVLDYREMLAHYPGA RTRVIEGSDHGISEFADYVDDVLAFCDAVPAR >Mature_192_residues MILYLHGFRSSPRSYKSRLLAERLAALGREAEWRCPMLAVSPLEAVALAESEVAGAAPHEVTVIGSSLGGYYATWLAEKH GWRAVLLNPATVPQRDLAQYLGEQPLWHGGGSVVVEPRHLAELDALRVPAVTRPERYYLIAATGDEVLDYREMLAHYPGA RTRVIEGSDHGISEFADYVDDVLAFCDAVPAR
Specific function: Displays esterase activity toward palmitoyl-CoA and pNP- butyrate [H]
COG id: COG3150
COG function: function code R; Predicted esterase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789409, Length=184, Percent_Identity=41.304347826087, Blast_Score=141, Evalue=2e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008886 [H]
Pfam domain/function: PF05728 UPF0227 [H]
EC number: NA
Molecular weight: Translated: 21110; Mature: 21110
Theoretical pI: Translated: 5.57; Mature: 5.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILYLHGFRSSPRSYKSRLLAERLAALGREAEWRCPMLAVSPLEAVALAESEVAGAAPHE CEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCHHHHHHHHHHHCCCCCCE VTVIGSSLGGYYATWLAEKHGWRAVLLNPATVPQRDLAQYLGEQPLWHGGGSVVVEPRHL EEEEECCCCHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHCCCCEEECCCEEEECCHHH AELDALRVPAVTRPERYYLIAATGDEVLDYREMLAHYPGARTRVIEGSDHGISEFADYVD HHHHHHCCCCCCCCCEEEEEEECCHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHH DVLAFCDAVPAR HHHHHHHCCCCC >Mature Secondary Structure MILYLHGFRSSPRSYKSRLLAERLAALGREAEWRCPMLAVSPLEAVALAESEVAGAAPHE CEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCHHHHHHHHHHHCCCCCCE VTVIGSSLGGYYATWLAEKHGWRAVLLNPATVPQRDLAQYLGEQPLWHGGGSVVVEPRHL EEEEECCCCHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHCCCCEEECCCEEEECCHHH AELDALRVPAVTRPERYYLIAATGDEVLDYREMLAHYPGARTRVIEGSDHGISEFADYVD HHHHHHCCCCCCCCCEEEEEEECCHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHH DVLAFCDAVPAR HHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]