| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
Click here to switch to the map view.
The map label for this gene is mpl [H]
Identifier: 238026180
GI number: 238026180
Start: 537912
End: 539324
Strand: Direct
Name: mpl [H]
Synonym: bglu_1g05110
Alternate gene names: 238026180
Gene position: 537912-539324 (Clockwise)
Preceding gene: 238026169
Following gene: 238026181
Centisome position: 13.77
GC content: 69.71
Gene sequence:
>1413_bases ATGCATATCCACATTCTCGGCATCTGCGGCACCTTCATGGGCGGTCTGGCCGTGCTCGCGCGCGAGGCCGGCCATACCGT GACCGGCTGCGACGCAGGCGTCTATCCGCCGATGAGCACGCAGCTCGAAGCGCAGGGGATACAACTGATCGAAGGCTACG GCGCGGAGCAGATCGACCTGGCGCCGGACCTGTTCGTGATCGGCAACGTGGTCTCGCGCGGCAATCCGCTGATGGAGGCC ATCCTCGATCGCGGGCTGCCCTACGTATCCGGCCCGCAATGGCTCGGCGAACACGTGCTCGCCGGCAAATGGGTGCTGGC CGTGGCCGGCACCCACGGCAAGACCACCACCAGTTCGATGCTGGCCTGGCTGCTCGAGGAGTCGGGGCTGAACCCCGGTT TCCTGATCGGCGGCGTGCCGCTGAACTTCGGCGTCTCGGCGCGGCTGACCGAGTCGAGCTTCTTCGTGATCGAGGCCGAC GAATACGACACGGCGTTCTTCGACAAGCGCTCGAAGTTCGTCCATTACCGGCCGCGCACCGCCGTACTGAACAATCTCGA ATTCGATCACGCGGACATCTTCCCCGATCTCGCTGCGATCGAAACGCAATTCCACCATCTGGTGCGCACGGTGCCGGGCG TCGGCCGGATCGTCGCGAACGGCCGCGAGGCCGCGCTCGACCGCGTGCTCGCGCGCGGCTGCTGGAGCGAGGTCGAGCGC TTCGGCGTGGAGGGCGGCTGGCAGGCGCTGCCTGCCGAGGACGGCGTGCCGGTGGACGAGCGCTTTGCCGTCTACTGGCA GGGCGCGCGCATGGGCGAGGTCGCCTGGAGCGTGCAGGGCGAGCACAACCGCCAGAACGCGCTGGCCGCGATCGCGGCGG CGCGCTCGGTCGGCGTGCCGCCGGCGCAGGCCGCACGCGCGTTCGCGACGTTTCGCAACGTCAAGCGCCGCATGGAGATT CGCGGCAGCGTGGACGGCGTGACCGTCTACGACGACTTCGCCCATCATCCGACCGCGATCGAAACCACCATCGCCGGGCT TCGCACGCGCATCGGCCGCGAACACACGCGGATTCTCGCCGTGCTCGAGCCGCGCTCGAACACCATGAAGCTCGGCACCA TGAAGGCGCAATTGCCGGCCAGCCTCGCCGATGCCGATCTGGTGTTCGGCTATGGCGCGGCCTCGGGACGCGACGCGCTC GGCTGGAGCCTGGCCGAGGCGCTGGCGCCGCTCGGCGCGCGCGCGCAGGCGTTCGACGACCTGCATGCGCTGGTGAAGGC GGTGGCGGCCGCCGCACGGCCCGGCGACCAGATCCTCGTGATGAGCAACGGCGGCTTCGGCGGGGTCCACCAGAAGCTGC TCGACGCGCTGTCGGCGCGCGGTGCCGCCCACGGCGCGGAGGACCGCGCGTGA
Upstream 100 bases:
>100_bases GCGGTGCTGCGTGGCTGCGGCAAGCGCGGCACCGCCGCGTGCCGCGGATCCGGCCCGCGATTTCGAATGGCGCCCGCGCG GCGCGACACGACGGCTCTCT
Downstream 100 bases:
>100_bases TTCTCTATCTGCACGGCTTTCGCTCGTCGCCGCGTTCCTACAAGTCGCGCCTGCTTGCCGAGCGGCTTGCCGCGCTCGGC CGCGAGGCCGAATGGCGCTG
Product: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase
Products: NA
Alternate protein names: Murein peptide ligase [H]
Number of amino acids: Translated: 470; Mature: 470
Protein sequence:
>470_residues MHIHILGICGTFMGGLAVLAREAGHTVTGCDAGVYPPMSTQLEAQGIQLIEGYGAEQIDLAPDLFVIGNVVSRGNPLMEA ILDRGLPYVSGPQWLGEHVLAGKWVLAVAGTHGKTTTSSMLAWLLEESGLNPGFLIGGVPLNFGVSARLTESSFFVIEAD EYDTAFFDKRSKFVHYRPRTAVLNNLEFDHADIFPDLAAIETQFHHLVRTVPGVGRIVANGREAALDRVLARGCWSEVER FGVEGGWQALPAEDGVPVDERFAVYWQGARMGEVAWSVQGEHNRQNALAAIAAARSVGVPPAQAARAFATFRNVKRRMEI RGSVDGVTVYDDFAHHPTAIETTIAGLRTRIGREHTRILAVLEPRSNTMKLGTMKAQLPASLADADLVFGYGAASGRDAL GWSLAEALAPLGARAQAFDDLHALVKAVAAAARPGDQILVMSNGGFGGVHQKLLDALSARGAAHGAEDRA
Sequences:
>Translated_470_residues MHIHILGICGTFMGGLAVLAREAGHTVTGCDAGVYPPMSTQLEAQGIQLIEGYGAEQIDLAPDLFVIGNVVSRGNPLMEA ILDRGLPYVSGPQWLGEHVLAGKWVLAVAGTHGKTTTSSMLAWLLEESGLNPGFLIGGVPLNFGVSARLTESSFFVIEAD EYDTAFFDKRSKFVHYRPRTAVLNNLEFDHADIFPDLAAIETQFHHLVRTVPGVGRIVANGREAALDRVLARGCWSEVER FGVEGGWQALPAEDGVPVDERFAVYWQGARMGEVAWSVQGEHNRQNALAAIAAARSVGVPPAQAARAFATFRNVKRRMEI RGSVDGVTVYDDFAHHPTAIETTIAGLRTRIGREHTRILAVLEPRSNTMKLGTMKAQLPASLADADLVFGYGAASGRDAL GWSLAEALAPLGARAQAFDDLHALVKAVAAAARPGDQILVMSNGGFGGVHQKLLDALSARGAAHGAEDRA >Mature_470_residues MHIHILGICGTFMGGLAVLAREAGHTVTGCDAGVYPPMSTQLEAQGIQLIEGYGAEQIDLAPDLFVIGNVVSRGNPLMEA ILDRGLPYVSGPQWLGEHVLAGKWVLAVAGTHGKTTTSSMLAWLLEESGLNPGFLIGGVPLNFGVSARLTESSFFVIEAD EYDTAFFDKRSKFVHYRPRTAVLNNLEFDHADIFPDLAAIETQFHHLVRTVPGVGRIVANGREAALDRVLARGCWSEVER FGVEGGWQALPAEDGVPVDERFAVYWQGARMGEVAWSVQGEHNRQNALAAIAAARSVGVPPAQAARAFATFRNVKRRMEI RGSVDGVTVYDDFAHHPTAIETTIAGLRTRIGREHTRILAVLEPRSNTMKLGTMKAQLPASLADADLVFGYGAASGRDAL GWSLAEALAPLGARAQAFDDLHALVKAVAAAARPGDQILVMSNGGFGGVHQKLLDALSARGAAHGAEDRA
Specific function: Reutilizes the intact tripeptide L-alanyl-gamma-D- glutamyl-meso-diaminopimelate by linking it to UDP-N-acetylmuramic acid [H]
COG id: COG0773
COG function: function code M; UDP-N-acetylmuramate-alanine ligase
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MurCDEF family [H]
Homologues:
Organism=Escherichia coli, GI1790680, Length=463, Percent_Identity=59.6112311015119, Blast_Score=545, Evalue=1e-156, Organism=Escherichia coli, GI1786279, Length=348, Percent_Identity=29.0229885057471, Blast_Score=103, Evalue=3e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004101 - InterPro: IPR013221 - InterPro: IPR000713 - InterPro: IPR005757 - InterPro: IPR016040 [H]
Pfam domain/function: PF01225 Mur_ligase; PF02875 Mur_ligase_C; PF08245 Mur_ligase_M [H]
EC number: 6.3.2.- [C]
Molecular weight: Translated: 50194; Mature: 50194
Theoretical pI: Translated: 6.31; Mature: 6.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHIHILGICGTFMGGLAVLAREAGHTVTGCDAGVYPPMSTQLEAQGIQLIEGYGAEQIDL CEEEEEEHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCHHCCHHHHHCCCCCEECC APDLFVIGNVVSRGNPLMEAILDRGLPYVSGPQWLGEHVLAGKWVLAVAGTHGKTTTSSM CCCHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCCHHHHH LAWLLEESGLNPGFLIGGVPLNFGVSARLTESSFFVIEADEYDTAFFDKRSKFVHYRPRT HHHHHHHCCCCCCEEEECCCCCCCCEEEEECCEEEEEECCCCCCHHHHCCCCEEEECCHH AVLNNLEFDHADIFPDLAAIETQFHHLVRTVPGVGRIVANGREAALDRVLARGCWSEVER HHHCCCCCCHHHHCCHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHHHHHH FGVEGGWQALPAEDGVPVDERFAVYWQGARMGEVAWSVQGEHNRQNALAAIAAARSVGVP HCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCC PAQAARAFATFRNVKRRMEIRGSVDGVTVYDDFAHHPTAIETTIAGLRTRIGREHTRILA HHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEE VLEPRSNTMKLGTMKAQLPASLADADLVFGYGAASGRDALGWSLAEALAPLGARAQAFDD EECCCCCCEEEEEEHHHCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHCCCCCHHHHHHH LHALVKAVAAAARPGDQILVMSNGGFGGVHQKLLDALSARGAAHGAEDRA HHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MHIHILGICGTFMGGLAVLAREAGHTVTGCDAGVYPPMSTQLEAQGIQLIEGYGAEQIDL CEEEEEEHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCHHCCHHHHHCCCCCEECC APDLFVIGNVVSRGNPLMEAILDRGLPYVSGPQWLGEHVLAGKWVLAVAGTHGKTTTSSM CCCHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCCHHHHH LAWLLEESGLNPGFLIGGVPLNFGVSARLTESSFFVIEADEYDTAFFDKRSKFVHYRPRT HHHHHHHCCCCCCEEEECCCCCCCCEEEEECCEEEEEECCCCCCHHHHCCCCEEEECCHH AVLNNLEFDHADIFPDLAAIETQFHHLVRTVPGVGRIVANGREAALDRVLARGCWSEVER HHHCCCCCCHHHHCCHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHHHHHH FGVEGGWQALPAEDGVPVDERFAVYWQGARMGEVAWSVQGEHNRQNALAAIAAARSVGVP HCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCC PAQAARAFATFRNVKRRMEIRGSVDGVTVYDDFAHHPTAIETTIAGLRTRIGREHTRILA HHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEE VLEPRSNTMKLGTMKAQLPASLADADLVFGYGAASGRDALGWSLAEALAPLGARAQAFDD EECCCCCCEEEEEEHHHCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHCCCCCHHHHHHH LHALVKAVAAAARPGDQILVMSNGGFGGVHQKLLDALSARGAAHGAEDRA HHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7610040; 9278503; 2843822; 7984428; 8808921 [H]