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The map label for this gene is pcp [H]

Identifier: 238026170

GI number: 238026170

Start: 529355

End: 529831

Strand: Reverse

Name: pcp [H]

Synonym: bglu_1g05010

Alternate gene names: 238026170

Gene position: 529831-529355 (Counterclockwise)

Preceding gene: 238026171

Following gene: 238026162

Centisome position: 13.56

GC content: 70.02

Gene sequence:

>477_bases
ATGCTGACCAGAAAAACCCTCACGCTCACCGCGATGCTCGCGGCCTCGGTGTCGCTCACCGGCTGTTTCACGCCGCCTGG
CTCGGCCGATGTCTACAGCGCCAGCCAGACGCAGCGCGAGCAGACCGTGCGCTTCGGCACGGTCGAGAGCGTGCGCGCGG
TGCGCATCGAAAGCGACACCGGCGCCGGCTCGACGCTCGGCACGCTCGGCGGTGGCGCACTCGGTGCCGTGGCCGGTAGC
GCGATCGGAGGCGGCAGGGGCTCGATCCTGACCGCGATCGCGGGCGGCATTGCCGGCGCCGTGGCGGGCAATGCGATCGG
CCAGGGCGTGAGTACGGCGAACGGTGTCGAAATCACCGTGCGCCTCGACAACGGTGACTTGCGCTCGATCACGCAAGCCG
CCACACCGGAAGTATTCCGCGCAGGTGACCGCGTCCGCCTGTTGTCGAGCGGCGGCGTGACCCGCGTCACGCACTGA

Upstream 100 bases:

>100_bases
GGACCGCAATCCTACCTGCTCGGCCGGACCGAAATCTTGTCTCGCTTTCAGAGCGCGTTCGGCTACAGTATCGAATGAGA
CTCGTTGGAGAGAACTACCC

Downstream 100 bases:

>100_bases
GCGAGGAGGCCTCAGCACGCGGCAAGAGCCGCGATATCCAGCGCATACGCGATTCGTTTCGCGTATGCGTTTTTTTTGCG
TGTGCGCTCCGGCCATGAAA

Product: outer membrane lipoprotein

Products: NA

Alternate protein names: 15 kDa lipoprotein; PAL cross-reacting lipoprotein [H]

Number of amino acids: Translated: 158; Mature: 158

Protein sequence:

>158_residues
MLTRKTLTLTAMLAASVSLTGCFTPPGSADVYSASQTQREQTVRFGTVESVRAVRIESDTGAGSTLGTLGGGALGAVAGS
AIGGGRGSILTAIAGGIAGAVAGNAIGQGVSTANGVEITVRLDNGDLRSITQAATPEVFRAGDRVRLLSSGGVTRVTH

Sequences:

>Translated_158_residues
MLTRKTLTLTAMLAASVSLTGCFTPPGSADVYSASQTQREQTVRFGTVESVRAVRIESDTGAGSTLGTLGGGALGAVAGS
AIGGGRGSILTAIAGGIAGAVAGNAIGQGVSTANGVEITVRLDNGDLRSITQAATPEVFRAGDRVRLLSSGGVTRVTH
>Mature_158_residues
MLTRKTLTLTAMLAASVSLTGCFTPPGSADVYSASQTQREQTVRFGTVESVRAVRIESDTGAGSTLGTLGGGALGAVAGS
AIGGGRGSILTAIAGGIAGAVAGNAIGQGVSTANGVEITVRLDNGDLRSITQAATPEVFRAGDRVRLLSSGGVTRVTH

Specific function: Unknown

COG id: COG3133

COG function: function code M; Outer membrane lipoprotein

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pcp/slyB lipoprotein family [H]

Homologues:

Organism=Escherichia coli, GI48994887, Length=136, Percent_Identity=36.7647058823529, Blast_Score=64, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008816 [H]

Pfam domain/function: PF05433 Rick_17kDa_Anti [H]

EC number: NA

Molecular weight: Translated: 15603; Mature: 15603

Theoretical pI: Translated: 10.39; Mature: 10.39

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTRKTLTLTAMLAASVSLTGCFTPPGSADVYSASQTQREQTVRFGTVESVRAVRIESDT
CCCCCHHHHHHHHHHHHEEEEEECCCCCCCEECCCHHHHHHHHCCCCCCCEEEEEEECCC
GAGSTLGTLGGGALGAVAGSAIGGGRGSILTAIAGGIAGAVAGNAIGQGVSTANGVEITV
CCCCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCHHCCCCCCCCCEEEEE
RLDNGDLRSITQAATPEVFRAGDRVRLLSSGGVTRVTH
EECCCCHHHHHHHCCCHHHHCCCEEEEEECCCEEEECC
>Mature Secondary Structure
MLTRKTLTLTAMLAASVSLTGCFTPPGSADVYSASQTQREQTVRFGTVESVRAVRIESDT
CCCCCHHHHHHHHHHHHEEEEEECCCCCCCEECCCHHHHHHHHCCCCCCCEEEEEEECCC
GAGSTLGTLGGGALGAVAGSAIGGGRGSILTAIAGGIAGAVAGNAIGQGVSTANGVEITV
CCCCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCHHCCCCCCCCCEEEEE
RLDNGDLRSITQAATPEVFRAGDRVRLLSSGGVTRVTH
EECCCCHHHHHHHCCCHHHHCCCEEEEEECCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2828309; 7542800 [H]