| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is adoK [H]
Identifier: 238026171
GI number: 238026171
Start: 529854
End: 530792
Strand: Reverse
Name: adoK [H]
Synonym: bglu_1g05020
Alternate gene names: 238026171
Gene position: 530792-529854 (Counterclockwise)
Preceding gene: 238026172
Following gene: 238026170
Centisome position: 13.59
GC content: 65.5
Gene sequence:
>939_bases TTGGCTACGCTGATTTGCGGTTCGATCGCCTACGACAACATCATGACCTTCGAGGGGCGCTTTCGGGAGCACATCCTGCC CGATCAGGTCCACCTCATCAATCTGAGCTTCCTCGTGCCGACCATGCGGCGCGAGTTCGGCGGCTGCGCCGGCAACATCG CCTATGCGCTGCACGCGCTCGGTGGCGACGCCCGCGTGATGGGAACGCTCGGCGCGATCGACGGGCAGCTCTACCTCGAC CGCTTCGACTCGCTTGGCCTCGCGCGCGACTACGTGCGAGTGGTGCCGGACACGCACTCGGCGCAGGCGATGATCACCAC CGATCTCGACAACAACCAGATCACCGCCTTCCACCCGGGCGCGATGATGCAGTCGCACCTGAACCATGCGGGCGAGGCGC GCGACATCCGGCTCGCGATCATCGGCCCGGACGGCTTCCAGGGCATGGTCCAGCACGTCGAGGAGCTCGCGAAGGCCGGC GTGCCGTTCGTGTTCGATCCTGGCCAGGGCCTGCCGCTGTTCGACCGCGAGACGCTGCGGCGCAGCATTGAACTTGCCAC CTATCTGGCGGTCAACGACTACGAAGCCAAGCTGGTAAGCGACAAGACGGGCTGGTCGGAGGACGAGCTCGCGAGCCGGG TTCAGGCCCTGATCATTACGCGCGGCGAGCATGGCGCCACCATCCGCCACCGCGACGGCATCGAGCAGATCCCGGTCGTC AAGGCCGAACAGATCGTCGATCCGACCGGTTGCGGCGACGCCTTCCGCGGCGGCCTGCTCTACGGCATCGAGAAGGGGCT GGACTGGGCAACCACCGGCCGCCTCGCGAGCCTGATGGGGTCGATCAAGATCGCGCATTCAGGACCGCAATCCTACCTGC TCGGCCGGACCGAAATCTTGTCTCGCTTTCAGAGCGCGTTCGGCTACAGTATCGAATGA
Upstream 100 bases:
>100_bases TAAGCGTCGCGCACCCGGCGGCACCTCGCGCGCGGCGCGGCCATCGCGACGCGCGCGTCCCCCATCCTTGCACCGCTTCA CACTCTGAACAGGAACGATC
Downstream 100 bases:
>100_bases GACTCGTTGGAGAGAACTACCCATGCTGACCAGAAAAACCCTCACGCTCACCGCGATGCTCGCGGCCTCGGTGTCGCTCA CCGGCTGTTTCACGCCGCCT
Product: putative sugar kinase
Products: NA
Alternate protein names: AK [H]
Number of amino acids: Translated: 312; Mature: 311
Protein sequence:
>312_residues MATLICGSIAYDNIMTFEGRFREHILPDQVHLINLSFLVPTMRREFGGCAGNIAYALHALGGDARVMGTLGAIDGQLYLD RFDSLGLARDYVRVVPDTHSAQAMITTDLDNNQITAFHPGAMMQSHLNHAGEARDIRLAIIGPDGFQGMVQHVEELAKAG VPFVFDPGQGLPLFDRETLRRSIELATYLAVNDYEAKLVSDKTGWSEDELASRVQALIITRGEHGATIRHRDGIEQIPVV KAEQIVDPTGCGDAFRGGLLYGIEKGLDWATTGRLASLMGSIKIAHSGPQSYLLGRTEILSRFQSAFGYSIE
Sequences:
>Translated_312_residues MATLICGSIAYDNIMTFEGRFREHILPDQVHLINLSFLVPTMRREFGGCAGNIAYALHALGGDARVMGTLGAIDGQLYLD RFDSLGLARDYVRVVPDTHSAQAMITTDLDNNQITAFHPGAMMQSHLNHAGEARDIRLAIIGPDGFQGMVQHVEELAKAG VPFVFDPGQGLPLFDRETLRRSIELATYLAVNDYEAKLVSDKTGWSEDELASRVQALIITRGEHGATIRHRDGIEQIPVV KAEQIVDPTGCGDAFRGGLLYGIEKGLDWATTGRLASLMGSIKIAHSGPQSYLLGRTEILSRFQSAFGYSIE >Mature_311_residues ATLICGSIAYDNIMTFEGRFREHILPDQVHLINLSFLVPTMRREFGGCAGNIAYALHALGGDARVMGTLGAIDGQLYLDR FDSLGLARDYVRVVPDTHSAQAMITTDLDNNQITAFHPGAMMQSHLNHAGEARDIRLAIIGPDGFQGMVQHVEELAKAGV PFVFDPGQGLPLFDRETLRRSIELATYLAVNDYEAKLVSDKTGWSEDELASRVQALIITRGEHGATIRHRDGIEQIPVVK AEQIVDPTGCGDAFRGGLLYGIEKGLDWATTGRLASLMGSIKIAHSGPQSYLLGRTEILSRFQSAFGYSIE
Specific function: ATP dependent phosphorylation of adenosine to monophosphate derivatives [H]
COG id: COG0524
COG function: function code G; Sugar kinases, ribokinase family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the carbohydrate kinase pfkB family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011611 - InterPro: IPR002173 [H]
Pfam domain/function: PF00294 PfkB [H]
EC number: =2.7.1.20 [H]
Molecular weight: Translated: 34072; Mature: 33941
Theoretical pI: Translated: 5.54; Mature: 5.54
Prosite motif: PS00583 PFKB_KINASES_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATLICGSIAYDNIMTFEGRFREHILPDQVHLINLSFLVPTMRREFGGCAGNIAYALHAL CCEEEECCHHHCCEEEECCHHHHCCCCCCEEEEEHHHHHHHHHHHHCCCCHHHHHHHHHC GGDARVMGTLGAIDGQLYLDRFDSLGLARDYVRVVPDTHSAQAMITTDLDNNQITAFHPG CCCEEEEEEHHCCCCHHHHHHHHCCCHHHHHHHCCCCCCCCCEEEEEECCCCEEEEECCC AMMQSHLNHAGEARDIRLAIIGPDGFQGMVQHVEELAKAGVPFVFDPGQGLPLFDRETLR HHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCEEECCCCCCCCCCHHHHH RSIELATYLAVNDYEAKLVSDKTGWSEDELASRVQALIITRGEHGATIRHRDGIEQIPVV HHHHHHEEEEECCCCEEEECCCCCCCHHHHHHHHHEEEEECCCCCCEEEECCCCCCCCCC KAEQIVDPTGCGDAFRGGLLYGIEKGLDWATTGRLASLMGSIKIAHSGPQSYLLGRTEIL CHHHHCCCCCCCHHHHCCEEEHHHCCCCHHHHHHHHHHHHCEEEECCCCHHHHCCHHHHH SRFQSAFGYSIE HHHHHHCCCCCC >Mature Secondary Structure ATLICGSIAYDNIMTFEGRFREHILPDQVHLINLSFLVPTMRREFGGCAGNIAYALHAL CEEEECCHHHCCEEEECCHHHHCCCCCCEEEEEHHHHHHHHHHHHCCCCHHHHHHHHHC GGDARVMGTLGAIDGQLYLDRFDSLGLARDYVRVVPDTHSAQAMITTDLDNNQITAFHPG CCCEEEEEEHHCCCCHHHHHHHHCCCHHHHHHHCCCCCCCCCEEEEEECCCCEEEEECCC AMMQSHLNHAGEARDIRLAIIGPDGFQGMVQHVEELAKAGVPFVFDPGQGLPLFDRETLR HHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCEEECCCCCCCCCCHHHHH RSIELATYLAVNDYEAKLVSDKTGWSEDELASRVQALIITRGEHGATIRHRDGIEQIPVV HHHHHHEEEEECCCCEEEECCCCCCCHHHHHHHHHEEEEECCCCCCEEEECCCCCCCCCC KAEQIVDPTGCGDAFRGGLLYGIEKGLDWATTGRLASLMGSIKIAHSGPQSYLLGRTEIL CHHHHCCCCCCCHHHHCCEEEHHHCCCCHHHHHHHHHHHHCEEEECCCCHHHHCCHHHHH SRFQSAFGYSIE HHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]