| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is hisF [H]
Identifier: 238026011
GI number: 238026011
Start: 356035
End: 356808
Strand: Direct
Name: hisF [H]
Synonym: bglu_1g03370
Alternate gene names: 238026011
Gene position: 356035-356808 (Clockwise)
Preceding gene: 238026010
Following gene: 238026012
Centisome position: 9.11
GC content: 70.28
Gene sequence:
>774_bases ATGGCTCTAGCTAAACGCATCATCCCCTGTCTGGACGTGACCGCCGGGCGCGTCGTGAAAGGCGTCAATTTCGTCGAGCT GCGCGACGCGGGCGACCCCGTCGAAATCGCGCGGCGCTACGACGACCAGGGCGCCGACGAACTGACGTTCCTCGACATCA CCGCCACCTCGGACCAGCGCGACCTGATCCTGCCGATCATCGAGGCGGTGGCCTCGCAGGTCTTCATCCCGCTGACGGTG GGCGGCGGCGTGCGGGCGGTCGAGGACGTGCGGCGCCTGCTCAACGCCGGCGCGGACAAGATCAGCATGAATTCCTCGGC GGTCGCCAACCCGCAGCTGGTCGCCGACGCGGCCGGCAAGTACGGCTCGCAATGCATCGTGGTGGCGATCGACGCCAAGC GGGTTTCGGCCGAGGGCGAGACGCCGCGCTGGGAAGTGTTCACGCACGGCGGGCGCAAGGCCACCGGGCTCGACGCGATC GCGTGGGCGCGCCGCATGGCCGAGCTCGGCGCGGGCGAGATCCTGCTGACCAGCATGGACCGCGACGGCACCAAGTCCGG CTTCGACCTGGCGCTCACGCGCGGCGTGTCGGACGCCGTACCGGTGCCGGTGATCGCCTCCGGCGGCGTGGGCTCGCTCG AGCACCTGGCCGACGGCATCGTCGAGGGCCATGCCGACGCGGTGCTCGCGGCCAGCATCTTCCATTACGGCGAGCATACG GTCGGCGAGGCGAAGCGCTTCATGGCCGGGCGCGGCATTCCGGTGAGGCTCTGA
Upstream 100 bases:
>100_bases GCTCGACGACGCCTGAGCCGCGGCGGCCCAGCGCCGCGTGCGTCATCGCCCAAGCCGCCCGCGCCGCGGGCGGCCTCACC TGCGGCACCTGTGTACCATC
Downstream 100 bases:
>100_bases TCATGACGACGACACAGGCGGCGGCCCGCCCCGCGTGGCTCGACAAGGTCCGCTGGGACGCCAACGGCCTCGTGCCGGTG ATCGCGCAGGAGGTCGGCAC
Product: imidazole glycerol phosphate synthase subunit HisF
Products: D-erythro-imidazole-glycerol-phosphate; AICAR; L-glutamate [C]
Alternate protein names: IGP synthase cyclase subunit; IGP synthase subunit hisF; ImGP synthase subunit hisF; IGPS subunit hisF [H]
Number of amino acids: Translated: 257; Mature: 256
Protein sequence:
>257_residues MALAKRIIPCLDVTAGRVVKGVNFVELRDAGDPVEIARRYDDQGADELTFLDITATSDQRDLILPIIEAVASQVFIPLTV GGGVRAVEDVRRLLNAGADKISMNSSAVANPQLVADAAGKYGSQCIVVAIDAKRVSAEGETPRWEVFTHGGRKATGLDAI AWARRMAELGAGEILLTSMDRDGTKSGFDLALTRGVSDAVPVPVIASGGVGSLEHLADGIVEGHADAVLAASIFHYGEHT VGEAKRFMAGRGIPVRL
Sequences:
>Translated_257_residues MALAKRIIPCLDVTAGRVVKGVNFVELRDAGDPVEIARRYDDQGADELTFLDITATSDQRDLILPIIEAVASQVFIPLTV GGGVRAVEDVRRLLNAGADKISMNSSAVANPQLVADAAGKYGSQCIVVAIDAKRVSAEGETPRWEVFTHGGRKATGLDAI AWARRMAELGAGEILLTSMDRDGTKSGFDLALTRGVSDAVPVPVIASGGVGSLEHLADGIVEGHADAVLAASIFHYGEHT VGEAKRFMAGRGIPVRL >Mature_256_residues ALAKRIIPCLDVTAGRVVKGVNFVELRDAGDPVEIARRYDDQGADELTFLDITATSDQRDLILPIIEAVASQVFIPLTVG GGVRAVEDVRRLLNAGADKISMNSSAVANPQLVADAAGKYGSQCIVVAIDAKRVSAEGETPRWEVFTHGGRKATGLDAIA WARRMAELGAGEILLTSMDRDGTKSGFDLALTRGVSDAVPVPVIASGGVGSLEHLADGIVEGHADAVLAASIFHYGEHTV GEAKRFMAGRGIPVRL
Specific function: IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The hisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the hisH subunit [H]
COG id: COG0107
COG function: function code E; Imidazoleglycerol-phosphate synthase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hisA/hisF family [H]
Homologues:
Organism=Escherichia coli, GI1788336, Length=259, Percent_Identity=42.4710424710425, Blast_Score=210, Evalue=6e-56, Organism=Escherichia coli, GI87082028, Length=215, Percent_Identity=31.6279069767442, Blast_Score=96, Evalue=3e-21, Organism=Saccharomyces cerevisiae, GI6319725, Length=314, Percent_Identity=34.7133757961783, Blast_Score=167, Evalue=1e-42,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR006062 - InterPro: IPR004651 - InterPro: IPR011060 [H]
Pfam domain/function: PF00977 His_biosynth [H]
EC number: 4.1.3.- [C]
Molecular weight: Translated: 27010; Mature: 26879
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALAKRIIPCLDVTAGRVVKGVNFVELRDAGDPVEIARRYDDQGADELTFLDITATSDQR CCCHHHHHHHHCCCHHHHHCCCCEEEECCCCCHHHHHHHHCCCCCCCEEEEEEEECCCCC DLILPIIEAVASQVFIPLTVGGGVRAVEDVRRLLNAGADKISMNSSAVANPQLVADAAGK CHHHHHHHHHHHCEEEEEEECCCHHHHHHHHHHHHCCCCEEECCCCCCCCCHHHHHHCCC YGSQCIVVAIDAKRVSAEGETPRWEVFTHGGRKATGLDAIAWARRMAELGAGEILLTSMD CCCEEEEEEEECEEECCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEEEEECC RDGTKSGFDLALTRGVSDAVPVPVIASGGVGSLEHLADGIVEGHADAVLAASIFHYGEHT CCCCCCCCEEEEECCCCCCCCCCEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCC VGEAKRFMAGRGIPVRL HHHHHHHHHCCCCEECC >Mature Secondary Structure ALAKRIIPCLDVTAGRVVKGVNFVELRDAGDPVEIARRYDDQGADELTFLDITATSDQR CCHHHHHHHHCCCHHHHHCCCCEEEECCCCCHHHHHHHHCCCCCCCEEEEEEEECCCCC DLILPIIEAVASQVFIPLTVGGGVRAVEDVRRLLNAGADKISMNSSAVANPQLVADAAGK CHHHHHHHHHHHCEEEEEEECCCHHHHHHHHHHHHCCCCEEECCCCCCCCCHHHHHHCCC YGSQCIVVAIDAKRVSAEGETPRWEVFTHGGRKATGLDAIAWARRMAELGAGEILLTSMD CCCEEEEEEEECEEECCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEEEEECC RDGTKSGFDLALTRGVSDAVPVPVIASGGVGSLEHLADGIVEGHADAVLAASIFHYGEHT CCCCCCCCEEEEECCCCCCCCCCEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCC VGEAKRFMAGRGIPVRL HHHHHHHHHCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: phosphoribulosylformimino-AICAR-P; L-glutamine [C]
Specific reaction: phosphoribulosylformimino-AICAR-P + L-glutamine = D-erythro-imidazole-glycerol-phosphate + AICAR + L-glutamate [C]
General reaction: Lyases; Carbon-Nitrogen Lyases; Amidine-Lyases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA