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The map label for this gene is ychE [H]

Identifier: 238026008

GI number: 238026008

Start: 353772

End: 354392

Strand: Direct

Name: ychE [H]

Synonym: bglu_1g03340

Alternate gene names: 238026008

Gene position: 353772-354392 (Clockwise)

Preceding gene: 238026007

Following gene: 238026009

Centisome position: 9.06

GC content: 64.73

Gene sequence:

>621_bases
ATGGACCTGCTCAAATCGTTCATATCGCTGCTCGCGCTGATCAATCCGCTCGGCGCGGTGCCGTTCTTCCTGAGCCTGAC
GGCGGCGCTGACCGACGCCGAGCGGCGCAGGACGGTGCGCATCGCGGCGGTGTCGGTGTTCTGCGTGATCGCGGTCACCA
CGCTGCTCGGCCAGCAGATCATCCGCTTCTTCGGAATCTCGGTGGGCTCGCTCGAAGTCGGCGGCGGCATCATCATGCTG
CTGATGGCGATCAACATGCTGAACGCGCAGATGGGCAACACGCGCTCGACCCCCGAGGAGCGCGACGAGGCCGAGTCCAA
GCACAGCATCGCGGTGGTGCCGCTCGCTATCCCGCTGCTGACCGGGCCCGGCTCGATCAGCACGGTGATCGTCTATTCGG
CGGGCGCGGTGCACTGGTACGACCGGATCGGCCTGATCGCGATCGGCGCGGTGCTCGCGCTGCTCTGTTTTCTCGCGATG
CGGCTCGCCGAGCCGATCGCGAACTGGATCGGCCGCACCGGCATTAATATTGCGACGCGACTGATGGGATTGATGCTCTC
GGCGCTGGCGGTGGAATTCATCGTCGACGGACTGAAGGCTTTGCTGCCTGCACTGAAATGA

Upstream 100 bases:

>100_bases
TGAGCCAACCCGGATCGGCGCCGGCGGCGGCGGCAGCGCGGATTCGACCGCGCCGCCGCCCGCCCTGCCGCGTGCGCCGC
GCCGTACACGACACCGCACG

Downstream 100 bases:

>100_bases
AAACTTCGATTGCGATTGTGGATTATGGGATGGGCAACCTGCGCTCGGTGGCCCAGGCGCTGATGAAGGCCGAGCCGGAG
GCGCAGGTGGCGATCGTCGA

Product: MarC membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 206; Mature: 206

Protein sequence:

>206_residues
MDLLKSFISLLALINPLGAVPFFLSLTAALTDAERRRTVRIAAVSVFCVIAVTTLLGQQIIRFFGISVGSLEVGGGIIML
LMAINMLNAQMGNTRSTPEERDEAESKHSIAVVPLAIPLLTGPGSISTVIVYSAGAVHWYDRIGLIAIGAVLALLCFLAM
RLAEPIANWIGRTGINIATRLMGLMLSALAVEFIVDGLKALLPALK

Sequences:

>Translated_206_residues
MDLLKSFISLLALINPLGAVPFFLSLTAALTDAERRRTVRIAAVSVFCVIAVTTLLGQQIIRFFGISVGSLEVGGGIIML
LMAINMLNAQMGNTRSTPEERDEAESKHSIAVVPLAIPLLTGPGSISTVIVYSAGAVHWYDRIGLIAIGAVLALLCFLAM
RLAEPIANWIGRTGINIATRLMGLMLSALAVEFIVDGLKALLPALK
>Mature_206_residues
MDLLKSFISLLALINPLGAVPFFLSLTAALTDAERRRTVRIAAVSVFCVIAVTTLLGQQIIRFFGISVGSLEVGGGIIML
LMAINMLNAQMGNTRSTPEERDEAESKHSIAVVPLAIPLLTGPGSISTVIVYSAGAVHWYDRIGLIAIGAVLALLCFLAM
RLAEPIANWIGRTGINIATRLMGLMLSALAVEFIVDGLKALLPALK

Specific function: Unknown

COG id: COG2095

COG function: function code U; Multiple antibiotic transporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0056 (marC) family [H]

Homologues:

Organism=Escherichia coli, GI1787494, Length=202, Percent_Identity=39.1089108910891, Blast_Score=155, Evalue=3e-39,
Organism=Escherichia coli, GI1787809, Length=196, Percent_Identity=34.6938775510204, Blast_Score=97, Evalue=8e-22,
Organism=Escherichia coli, GI1789842, Length=202, Percent_Identity=28.2178217821782, Blast_Score=79, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002771 [H]

Pfam domain/function: PF01914 MarC [H]

EC number: NA

Molecular weight: Translated: 21869; Mature: 21869

Theoretical pI: Translated: 8.76; Mature: 8.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLLKSFISLLALINPLGAVPFFLSLTAALTDAERRRTVRIAAVSVFCVIAVTTLLGQQI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IRFFGISVGSLEVGGGIIMLLMAINMLNAQMGNTRSTPEERDEAESKHSIAVVPLAIPLL
HHHHCCCCCCEECCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCEEEEHHHHHHC
TGPGSISTVIVYSAGAVHWYDRIGLIAIGAVLALLCFLAMRLAEPIANWIGRTGINIATR
CCCCCHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
LMGLMLSALAVEFIVDGLKALLPALK
HHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDLLKSFISLLALINPLGAVPFFLSLTAALTDAERRRTVRIAAVSVFCVIAVTTLLGQQI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IRFFGISVGSLEVGGGIIMLLMAINMLNAQMGNTRSTPEERDEAESKHSIAVVPLAIPLL
HHHHCCCCCCEECCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCEEEEHHHHHHC
TGPGSISTVIVYSAGAVHWYDRIGLIAIGAVLALLCFLAMRLAEPIANWIGRTGINIATR
CCCCCHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
LMGLMLSALAVEFIVDGLKALLPALK
HHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2015910; 9097039; 9278503 [H]