| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is hisB [H]
Identifier: 238026007
GI number: 238026007
Start: 353087
End: 353674
Strand: Direct
Name: hisB [H]
Synonym: bglu_1g03330
Alternate gene names: 238026007
Gene position: 353087-353674 (Clockwise)
Preceding gene: 238026006
Following gene: 238026008
Centisome position: 9.04
GC content: 65.65
Gene sequence:
>588_bases ATGCGCGTGGCGGAAGTCGTTCGCGATACGAGCGAAACGCAGATCCGTGTGAAGATCAATCTCGACGGCACTGGCCAGCA GAAGCTGGCCACCGGCGTGCCGTTCCTCGACCATATGCTCGACCAGATCGCGCGCCATGGTCTCATCGATCTCGACATCG AAGCGCATGGGGATACGCATATCGACGACCACCACACGGTGGAGGACGTCGGCATCACGCTCGGCCAGGCGGTGGCGAAG GCGATCGGCGAGCGCAAGGGCATCCGCCGCTACGGCCATGCCTACGTGCCGCTCGACGAGGCGCTCTCGCGCGTGGTGAT CGACTTCTCGGGCCGGCCCGGCCTCGAATTCCACGTGCCGTTCACGCGCGCACGGATCGGCACCTTCGACGTGGACCTGT CGATCGAGTTCTTCCGCGGCTTCGTGAACCACGCGGGCGTCACGCTGCACATCGACAATCTGCGCGGCATCAACGCCCAT CACCAGCTCGAGACCGTCTTCAAGGCGTTCGGGCGCGCGCTGCGGATGGCCGCCGAGATCGACGAGCGGGCAGCCGGGCA GATTCCGTCGACCAAGGGCAGCCTCTGA
Upstream 100 bases:
>100_bases CGCGTTGCGACTGGTGCTGCGCTAGCGCGGGCCGCGCGCCGCCGGGCGGCCGCCGCGGCCTCGCGCGTCCCCCATTACCC AGTCATTTCAAGGAATCACC
Downstream 100 bases:
>100_bases GCCAACCCGGATCGGCGCCGGCGGCGGCGGCAGCGCGGATTCGACCGCGCCGCCGCCCGCCCTGCCGCGTGCGCCGCGCC GTACACGACACCGCACGATG
Product: imidazoleglycerol-phosphate dehydratase
Products: NA
Alternate protein names: IGPD [H]
Number of amino acids: Translated: 195; Mature: 195
Protein sequence:
>195_residues MRVAEVVRDTSETQIRVKINLDGTGQQKLATGVPFLDHMLDQIARHGLIDLDIEAHGDTHIDDHHTVEDVGITLGQAVAK AIGERKGIRRYGHAYVPLDEALSRVVIDFSGRPGLEFHVPFTRARIGTFDVDLSIEFFRGFVNHAGVTLHIDNLRGINAH HQLETVFKAFGRALRMAAEIDERAAGQIPSTKGSL
Sequences:
>Translated_195_residues MRVAEVVRDTSETQIRVKINLDGTGQQKLATGVPFLDHMLDQIARHGLIDLDIEAHGDTHIDDHHTVEDVGITLGQAVAK AIGERKGIRRYGHAYVPLDEALSRVVIDFSGRPGLEFHVPFTRARIGTFDVDLSIEFFRGFVNHAGVTLHIDNLRGINAH HQLETVFKAFGRALRMAAEIDERAAGQIPSTKGSL >Mature_195_residues MRVAEVVRDTSETQIRVKINLDGTGQQKLATGVPFLDHMLDQIARHGLIDLDIEAHGDTHIDDHHTVEDVGITLGQAVAK AIGERKGIRRYGHAYVPLDEALSRVVIDFSGRPGLEFHVPFTRARIGTFDVDLSIEFFRGFVNHAGVTLHIDNLRGINAH HQLETVFKAFGRALRMAAEIDERAAGQIPSTKGSL
Specific function: Histidine biosynthesis; sixth step. Histidine biosynthesis; eighth step. [C]
COG id: COG0131
COG function: function code E; Imidazoleglycerol-phosphate dehydratase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the imidazoleglycerol-phosphate dehydratase family [H]
Homologues:
Organism=Escherichia coli, GI87082027, Length=194, Percent_Identity=48.4536082474227, Blast_Score=183, Evalue=7e-48, Organism=Saccharomyces cerevisiae, GI6324776, Length=216, Percent_Identity=39.3518518518519, Blast_Score=152, Evalue=3e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000807 - InterPro: IPR020565 - InterPro: IPR020568 [H]
Pfam domain/function: PF00475 IGPD [H]
EC number: =4.2.1.19 [H]
Molecular weight: Translated: 21531; Mature: 21531
Theoretical pI: Translated: 6.65; Mature: 6.65
Prosite motif: PS00954 IGP_DEHYDRATASE_1 ; PS00955 IGP_DEHYDRATASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVAEVVRDTSETQIRVKINLDGTGQQKLATGVPFLDHMLDQIARHGLIDLDIEAHGDTH CCHHHHHHCCCCCEEEEEEEECCCCCHHHHHCCCHHHHHHHHHHHCCCEEEEEECCCCCC IDDHHTVEDVGITLGQAVAKAIGERKGIRRYGHAYVPLDEALSRVVIDFSGRPGLEFHVP CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHEEEEECCCCCCEEECC FTRARIGTFDVDLSIEFFRGFVNHAGVTLHIDNLRGINAHHQLETVFKAFGRALRMAAEI HHHHCCCEEEEEEHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHH DERAAGQIPSTKGSL HHHHCCCCCCCCCCC >Mature Secondary Structure MRVAEVVRDTSETQIRVKINLDGTGQQKLATGVPFLDHMLDQIARHGLIDLDIEAHGDTH CCHHHHHHCCCCCEEEEEEEECCCCCHHHHHCCCHHHHHHHHHHHCCCEEEEEECCCCCC IDDHHTVEDVGITLGQAVAKAIGERKGIRRYGHAYVPLDEALSRVVIDFSGRPGLEFHVP CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHEEEEECCCCCCEEECC FTRARIGTFDVDLSIEFFRGFVNHAGVTLHIDNLRGINAHHQLETVFKAFGRALRMAAEI HHHHCCCEEEEEEHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHH DERAAGQIPSTKGSL HHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA