| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is thiG [H]
Identifier: 238025992
GI number: 238025992
Start: 339915
End: 340730
Strand: Direct
Name: thiG [H]
Synonym: bglu_1g03180
Alternate gene names: 238025992
Gene position: 339915-340730 (Clockwise)
Preceding gene: 238025991
Following gene: 238025993
Centisome position: 8.7
GC content: 70.96
Gene sequence:
>816_bases ATGACGCTGCGTTCCCCCACCGATTCGCTGACGCTGTACGGCACCGTGCTGCAAAGCCGCGTGCTGCTCGGCACCTCCCG TTATCCGTCGCTGCAGTCGCTGTCCGATTCGATCGCCGCGTCGCGGCCCGGCATGGTCACCGTCGCGCTGCGCCGGCAGA TGAACGCCGGCACCGCCGAGGCCGGCTTCTTCGACCTGCTGCGGCGCCACGAGGTGCCGCTGCTGCCGAACACGGCCGGC TGCCAGACCGTCGCCGAGGCGGTCAGCACCGCCCAGATGGCGCGCGAGGTGTTCGAAACCGACTGGATCAAGCTCGAACT GATCGGCGACGACTACACGCTGCAACCCGATCCGGTCGGCCTGATCGAGGCGGCCGCGCTGCTCGTCAAGGACGGCTTCA AGGTGCTGCCGTACTGCACCGAGGATCTCGTGATCGGCCGGCGGCTGCTCGATGCCGGCTGCGAGGCGCTGATGCCGTGG GGCGCGCCGATCGGCACCGGCAAGGGCGTGATGAACCCCTACGCGCTGCGCGTGCTGCGCGAGCGGCTGCCGGACGTGCC GCTGATCGTCGACGCCGGGCTCGGCGTGCCGTCGCACGCGTGCCAGGTGATGGAATGGGGCTTCGACGGCGTGCTGCTGA ACACGGCCGTCTCGCAGGCCACCCATCCCGAGAGGATGGCGCGCGCCTTCGCGCAGGCCGTCGAGGCGGGCCGCGACGCC TGGCTGGCCGGGCCGATGGACCCGCGCGAGACCGCTCACGCCAGCACGCCGGTAGTCGGCATGCCGTTCTGGCACCACGA CGGAGGTGGGCAATGA
Upstream 100 bases:
>100_bases GCTCGCGGCCGGCGACCGGCTCGACGTCGTGCATCCCGTCGCGGGCGGCTGACCGGCGCGGCCCGCTTGCCTGCCCGGCA GACCTTTCACAGGACTTCCC
Downstream 100 bases:
>100_bases GCACGGGCTTCGGTGATATGTTCTGGCCCCCGGTGGATGACCTGGCGGCGGCCGCCGAGCGGATTCGCGCGCGGCTCGGC GAGTGGCCCGTGCGCCGCGC
Product: thiazole synthase
Products: 4-methyl-5-(beta-hydroxyethyl)thiazole phosphate; 4-hydroxy-benzyl-alcohol; C1 of tyrosine; ThiS protein [C]
Alternate protein names: NA
Number of amino acids: Translated: 271; Mature: 270
Protein sequence:
>271_residues MTLRSPTDSLTLYGTVLQSRVLLGTSRYPSLQSLSDSIAASRPGMVTVALRRQMNAGTAEAGFFDLLRRHEVPLLPNTAG CQTVAEAVSTAQMAREVFETDWIKLELIGDDYTLQPDPVGLIEAAALLVKDGFKVLPYCTEDLVIGRRLLDAGCEALMPW GAPIGTGKGVMNPYALRVLRERLPDVPLIVDAGLGVPSHACQVMEWGFDGVLLNTAVSQATHPERMARAFAQAVEAGRDA WLAGPMDPRETAHASTPVVGMPFWHHDGGGQ
Sequences:
>Translated_271_residues MTLRSPTDSLTLYGTVLQSRVLLGTSRYPSLQSLSDSIAASRPGMVTVALRRQMNAGTAEAGFFDLLRRHEVPLLPNTAG CQTVAEAVSTAQMAREVFETDWIKLELIGDDYTLQPDPVGLIEAAALLVKDGFKVLPYCTEDLVIGRRLLDAGCEALMPW GAPIGTGKGVMNPYALRVLRERLPDVPLIVDAGLGVPSHACQVMEWGFDGVLLNTAVSQATHPERMARAFAQAVEAGRDA WLAGPMDPRETAHASTPVVGMPFWHHDGGGQ >Mature_270_residues TLRSPTDSLTLYGTVLQSRVLLGTSRYPSLQSLSDSIAASRPGMVTVALRRQMNAGTAEAGFFDLLRRHEVPLLPNTAGC QTVAEAVSTAQMAREVFETDWIKLELIGDDYTLQPDPVGLIEAAALLVKDGFKVLPYCTEDLVIGRRLLDAGCEALMPWG APIGTGKGVMNPYALRVLRERLPDVPLIVDAGLGVPSHACQVMEWGFDGVLLNTAVSQATHPERMARAFAQAVEAGRDAW LAGPMDPRETAHASTPVVGMPFWHHDGGGQ
Specific function: Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S [H]
COG id: COG2022
COG function: function code H; Uncharacterized enzyme of thiazole biosynthesis
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the thiG family [H]
Homologues:
Organism=Escherichia coli, GI48994993, Length=252, Percent_Identity=41.6666666666667, Blast_Score=187, Evalue=8e-49,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR008867 [H]
Pfam domain/function: PF05690 ThiG [H]
EC number: NA
Molecular weight: Translated: 29174; Mature: 29043
Theoretical pI: Translated: 5.10; Mature: 5.10
Prosite motif: PS00133 CARBOXYPEPT_ZN_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLRSPTDSLTLYGTVLQSRVLLGTSRYPSLQSLSDSIAASRPGMVTVALRRQMNAGTAE CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEHEEHHHCCCCCCH AGFFDLLRRHEVPLLPNTAGCQTVAEAVSTAQMAREVFETDWIKLELIGDDYTLQPDPVG HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEECCCCCH LIEAAALLVKDGFKVLPYCTEDLVIGRRLLDAGCEALMPWGAPIGTGKGVMNPYALRVLR HHHHHHHHHHCCCEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHH ERLPDVPLIVDAGLGVPSHACQVMEWGFDGVLLNTAVSQATHPERMARAFAQAVEAGRDA HHCCCCCEEEECCCCCCHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCC WLAGPMDPRETAHASTPVVGMPFWHHDGGGQ EECCCCCHHHHHCCCCCEECCCCEECCCCCC >Mature Secondary Structure TLRSPTDSLTLYGTVLQSRVLLGTSRYPSLQSLSDSIAASRPGMVTVALRRQMNAGTAE CCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEHEEHHHCCCCCCH AGFFDLLRRHEVPLLPNTAGCQTVAEAVSTAQMAREVFETDWIKLELIGDDYTLQPDPVG HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEECCCCCH LIEAAALLVKDGFKVLPYCTEDLVIGRRLLDAGCEALMPWGAPIGTGKGVMNPYALRVLR HHHHHHHHHHCCCEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHH ERLPDVPLIVDAGLGVPSHACQVMEWGFDGVLLNTAVSQATHPERMARAFAQAVEAGRDA HHCCCCCEEEECCCCCCHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCC WLAGPMDPRETAHASTPVVGMPFWHHDGGGQ EECCCCCHHHHHCCCCCEECCCCEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: deoxyxylulose-5-phosphate; ThiS-COSH; L-tyrosine [C]
Specific reaction: deoxyxylulose-5-phosphate + ThiS-COSH + L-tyrosine = 4-methyl-5-(beta-hydroxyethyl)thiazole phosphate + 4-hydroxy-benzyl-alcohol + C1 of tyrosine + ThiS protein [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA