| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238025991
Identifier: 238025991
GI number: 238025991
Start: 339669
End: 339866
Strand: Direct
Name: 238025991
Synonym: bglu_1g03170
Alternate gene names: NA
Gene position: 339669-339866 (Clockwise)
Preceding gene: 238025990
Following gene: 238025992
Centisome position: 8.69
GC content: 74.24
Gene sequence:
>198_bases ATGGACATCCAGATCAACCAGCAGACGCTGACGCTTCCCGACGGCGCGACCGTCGCCGATGCGCTCGCCGCCTACCAGGC CCGGCCGCCGTTCGCGGTCGCCGTCAACGGCGCCTTCGTCGCGCGCGCGCAGCACGCGGAACGCACGCTCGCGGCCGGCG ACCGGCTCGACGTCGTGCATCCCGTCGCGGGCGGCTGA
Upstream 100 bases:
>100_bases CTCGCCGCATGGCGCCGTGCCGTGCGCTGGCCGACGCTGTTCCAGTATCAATCCGACCCCGTGTGCGCATGAGCGTGCCG CACCGATCCTTTACGACACC
Downstream 100 bases:
>100_bases CCGGCGCGGCCCGCTTGCCTGCCCGGCAGACCTTTCACAGGACTTCCCATGACGCTGCGTTCCCCCACCGATTCGCTGAC GCTGTACGGCACCGTGCTGC
Product: sulfur carrier protein ThiS
Products: NA
Alternate protein names: Sulfur Carrier Protein ThiS; ThiS Protein; Sulfur Transfer Protein Involved In Thiamine Biosynthesis; Thiamine Biosynthesis Protein This; ThiS Thiamine-Biosynthesis
Number of amino acids: Translated: 65; Mature: 65
Protein sequence:
>65_residues MDIQINQQTLTLPDGATVADALAAYQARPPFAVAVNGAFVARAQHAERTLAAGDRLDVVHPVAGG
Sequences:
>Translated_65_residues MDIQINQQTLTLPDGATVADALAAYQARPPFAVAVNGAFVARAQHAERTLAAGDRLDVVHPVAGG >Mature_65_residues MDIQINQQTLTLPDGATVADALAAYQARPPFAVAVNGAFVARAQHAERTLAAGDRLDVVHPVAGG
Specific function: Unknown
COG id: COG2104
COG function: function code H; Sulfur transfer protein involved in thiamine biosynthesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6710; Mature: 6710
Theoretical pI: Translated: 5.49; Mature: 5.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDIQINQQTLTLPDGATVADALAAYQARPPFAVAVNGAFVARAQHAERTLAAGDRLDVVH CCEECCCEEEECCCCCHHHHHHHHHCCCCCEEEEECCEEEECCHHHHHHHCCCCCCEEEC PVAGG CCCCC >Mature Secondary Structure MDIQINQQTLTLPDGATVADALAAYQARPPFAVAVNGAFVARAQHAERTLAAGDRLDVVH CCEECCCEEEECCCCCHHHHHHHHHCCCCCEEEEECCEEEECCHHHHHHHCCCCCCEEEC PVAGG CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA