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The map label for this gene is spsC [H]

Identifier: 238025841

GI number: 238025841

Start: 173649

End: 174797

Strand: Reverse

Name: spsC [H]

Synonym: bglu_1g01670

Alternate gene names: 238025841

Gene position: 174797-173649 (Counterclockwise)

Preceding gene: 238025842

Following gene: 238025840

Centisome position: 4.47

GC content: 63.97

Gene sequence:

>1149_bases
ATGATGAACGCCCTGCCGTTACGCGTAGTCGAGCCCCAGGCCGATGAACGCATCTATGTGACGCAGCCGCACCTGCCGCC
GCTGGCCGAGTTCCTGCCGTATCTGGAACAGATCTGGGACAGCAAGGTGCTCACCAACGGCGGCCCGTTTCATCAGAGGC
TCGAGCAGGCGCTCTGCGAGTATCTCGGCGTCAAGCACCTGGCGCTGTTCACGAACGGCACGCTGGCGCTGGTCACGGCG
CTGCAGGCGCTGCGCATCACCGGCGAGGTGATCACCACGCCGTATTCGTTCGTCGCCACCGCGCACTCGCTGCTGTGGAA
CGGCATCAAGCCGGTGTTCGTCGACATCGACCCGCACACGCTGAACCTCGATCCGAAAAAGATCGAGGCGGCCATCACGC
CACAGACGGCCGCCATCATGCCGGTGCACTGCTATGGCCGGCCGTGCGACGTGGAGGCGATCCGCCGCATCGCCGACAAC
TACAACCTGAAGGTGATCTACGACGCCGCGCACGCCTTCGGCGTGCAGATGCACGACAGCAGCGTGCTGGAGCACGGCGA
CCTGTCGATCCTGAGCTTCCACGCCACCAAGGTATTCAACACCTTCGAGGGCGGCGCGATCATCTGCCCGGACGCGAAGA
CCAAGCAACACATCGATCACCTGAAGAACTTCGGCTTCGTCGACGAAGTGACGGTGGTAGCCCCCGGCATCAACGCCAAG
ATGAGCGAGATCAACGCGGCGTTCGGGCTGCTGCAGCTGGAGTACGTCGACGACGCGCTCGCCAGGCGCGCCGCGATCGA
CGCGCGCTATCGAGAACTGCTGGCCGACGTGCCGGGAATCCGCTGCGTGCCGCCGGTGGACGTTAAGGTGTTCAATCACT
CGTACTTTCCGATTCTGGTGGACGAGCCATTCCCGCTCTCGCGCGACGCGCTCTATCAACACCTGCGCGATCACGAGATC
TACAGCCGCCGCTACTTCTATCCGCTGATCTCGGATTTCCCGAACTACCGCGGCCAGCCCTCCGCACATCCGGACAACCT
GCCGGTGGCGCGCGACACGTCGCGCCGGGTGCTCTGCCTGCCGATCTATCCGGAACTGTCGGACGCCAACGTGGAACGCA
TCGTCTCTCTGATTGCGGAGGCGCGCTGA

Upstream 100 bases:

>100_bases
GTGCCGACGAGGCGCCGGCCCCGTTCACGGTGCCGGAGCGCGCCGCTACCGGCGCCAGCGCCGATTCCGCGGCCGCCGAG
ACCGCCCTCACCGGAGACGC

Downstream 100 bases:

>100_bases
TGGCCGCACGCGCCACGATCCTCGACATCGCGAGCCACCTGCCCGCCATGGTGCTCGGCAACGACGCGCTCGCGGCGCTG
TACCCGGAGTGGCCGGCCGA

Product: DegT/DnrJ/EryC1/StrS aminotransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 382; Mature: 382

Protein sequence:

>382_residues
MMNALPLRVVEPQADERIYVTQPHLPPLAEFLPYLEQIWDSKVLTNGGPFHQRLEQALCEYLGVKHLALFTNGTLALVTA
LQALRITGEVITTPYSFVATAHSLLWNGIKPVFVDIDPHTLNLDPKKIEAAITPQTAAIMPVHCYGRPCDVEAIRRIADN
YNLKVIYDAAHAFGVQMHDSSVLEHGDLSILSFHATKVFNTFEGGAIICPDAKTKQHIDHLKNFGFVDEVTVVAPGINAK
MSEINAAFGLLQLEYVDDALARRAAIDARYRELLADVPGIRCVPPVDVKVFNHSYFPILVDEPFPLSRDALYQHLRDHEI
YSRRYFYPLISDFPNYRGQPSAHPDNLPVARDTSRRVLCLPIYPELSDANVERIVSLIAEAR

Sequences:

>Translated_382_residues
MMNALPLRVVEPQADERIYVTQPHLPPLAEFLPYLEQIWDSKVLTNGGPFHQRLEQALCEYLGVKHLALFTNGTLALVTA
LQALRITGEVITTPYSFVATAHSLLWNGIKPVFVDIDPHTLNLDPKKIEAAITPQTAAIMPVHCYGRPCDVEAIRRIADN
YNLKVIYDAAHAFGVQMHDSSVLEHGDLSILSFHATKVFNTFEGGAIICPDAKTKQHIDHLKNFGFVDEVTVVAPGINAK
MSEINAAFGLLQLEYVDDALARRAAIDARYRELLADVPGIRCVPPVDVKVFNHSYFPILVDEPFPLSRDALYQHLRDHEI
YSRRYFYPLISDFPNYRGQPSAHPDNLPVARDTSRRVLCLPIYPELSDANVERIVSLIAEAR
>Mature_382_residues
MMNALPLRVVEPQADERIYVTQPHLPPLAEFLPYLEQIWDSKVLTNGGPFHQRLEQALCEYLGVKHLALFTNGTLALVTA
LQALRITGEVITTPYSFVATAHSLLWNGIKPVFVDIDPHTLNLDPKKIEAAITPQTAAIMPVHCYGRPCDVEAIRRIADN
YNLKVIYDAAHAFGVQMHDSSVLEHGDLSILSFHATKVFNTFEGGAIICPDAKTKQHIDHLKNFGFVDEVTVVAPGINAK
MSEINAAFGLLQLEYVDDALARRAAIDARYRELLADVPGIRCVPPVDVKVFNHSYFPILVDEPFPLSRDALYQHLRDHEI
YSRRYFYPLISDFPNYRGQPSAHPDNLPVARDTSRRVLCLPIYPELSDANVERIVSLIAEAR

Specific function: Unknown

COG id: COG0399

COG function: function code M; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the degT/dnrJ/eryC1 family [H]

Homologues:

Organism=Escherichia coli, GI145693159, Length=381, Percent_Identity=31.758530183727, Blast_Score=160, Evalue=1e-40,
Organism=Escherichia coli, GI2367285, Length=375, Percent_Identity=29.8666666666667, Blast_Score=123, Evalue=2e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000653
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF01041 DegT_DnrJ_EryC1 [H]

EC number: NA

Molecular weight: Translated: 42853; Mature: 42853

Theoretical pI: Translated: 6.19; Mature: 6.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMNALPLRVVEPQADERIYVTQPHLPPLAEFLPYLEQIWDSKVLTNGGPFHQRLEQALCE
CCCCCCEEEECCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHHH
YLGVKHLALFTNGTLALVTALQALRITGEVITTPYSFVATAHSLLWNGIKPVFVDIDPHT
HHCCCEEEEEECCHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHCCCCEEEEEECCCE
LNLDPKKIEAAITPQTAAIMPVHCYGRPCDVEAIRRIADNYNLKVIYDAAHAFGVQMHDS
ECCCHHHHEEEECCCCEEEEEEEECCCCCCHHHHHHHHCCCCEEEEEECCHHHEEEECCC
SVLEHGDLSILSFHATKVFNTFEGGAIICPDAKTKQHIDHLKNFGFVDEVTVVAPGINAK
HHHCCCCEEEEEEEHHHHHHCCCCCEEECCCCCHHHHHHHHHHCCCCCCEEEEECCCCCH
MSEINAAFGLLQLEYVDDALARRAAIDARYRELLADVPGIRCVPPVDVKVFNHSYFPILV
HHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCEEEE
DEPFPLSRDALYQHLRDHEIYSRRYFYPLISDFPNYRGQPSAHPDNLPVARDTSRRVLCL
CCCCCCCHHHHHHHHHHHHHHHHHEECHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEE
PIYPELSDANVERIVSLIAEAR
ECCCCCCCCCHHHHHHHHHCCC
>Mature Secondary Structure
MMNALPLRVVEPQADERIYVTQPHLPPLAEFLPYLEQIWDSKVLTNGGPFHQRLEQALCE
CCCCCCEEEECCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHHH
YLGVKHLALFTNGTLALVTALQALRITGEVITTPYSFVATAHSLLWNGIKPVFVDIDPHT
HHCCCEEEEEECCHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHCCCCEEEEEECCCE
LNLDPKKIEAAITPQTAAIMPVHCYGRPCDVEAIRRIADNYNLKVIYDAAHAFGVQMHDS
ECCCHHHHEEEECCCCEEEEEEEECCCCCCHHHHHHHHCCCCEEEEEECCHHHEEEECCC
SVLEHGDLSILSFHATKVFNTFEGGAIICPDAKTKQHIDHLKNFGFVDEVTVVAPGINAK
HHHCCCCEEEEEEEHHHHHHCCCCCEEECCCCCHHHHHHHHHHCCCCCCEEEEECCCCCH
MSEINAAFGLLQLEYVDDALARRAAIDARYRELLADVPGIRCVPPVDVKVFNHSYFPILV
HHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCEEEE
DEPFPLSRDALYQHLRDHEIYSRRYFYPLISDFPNYRGQPSAHPDNLPVARDTSRRVLCL
CCCCCCCHHHHHHHHHHHHHHHHHEECHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEE
PIYPELSDANVERIVSLIAEAR
ECCCCCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7934828; 9384377 [H]