Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is tfaE [C]

Identifier: 238025804

GI number: 238025804

Start: 138294

End: 138929

Strand: Reverse

Name: tfaE [C]

Synonym: bglu_1g01290

Alternate gene names: 238025804

Gene position: 138929-138294 (Counterclockwise)

Preceding gene: 238025805

Following gene: 238025803

Centisome position: 3.56

GC content: 66.04

Gene sequence:

>636_bases
ATGCTCGTTCACCACTACAACCCGACCACCGGCGAATACCTGTCCAGCGGCCAGCCGGACGCCGACCCGCTCAACAACGA
TCGCTGGCTGATCCCATCAAACGCAACGCTCGACGCACCGCCGCCGCGCGCGGCAACGAGCTGGCCGTTCTACCGCGATG
GCGCCTGGTTTCTGCTTCCCGACTATCGCGGCCGCCGCTGCTATCGCACCGACACCGGCGAACCGGTCGAAATCGCCGTC
GCGGGCAAGACGCCCGACGAGCTGGGCTTGACGGACATCCCGCGCCCGTCCCCGCGGCATGCGTGGGTCGACGGCGCGTG
GGTTGTCCCCGATTCCGTCATTGAAGCGGAGAAGCGCGCAGCGCGGCAGCAGACGTTCGACCAGCTCATGGCAAATGCGA
AGAAGGCAAACGACGGAAAGGCCGACGCTTACGCCGCCGGCCTGCTCGACGACGAAGGCATCTATTACTTCAAAGCCTGG
TCCGCTTACCAGATGGCACTAGTGGCCGCCATGAACAGCACGGACGCTTCCGCCACCATCACCTGGCCGAAAACGCCAGC
GCCGTATGTCGCGCCCGTGGCCGAAGTGGCGCCGCAAGACGTGACACCGCCCGAGGCACCGACCAAGAGCGCGTAA

Upstream 100 bases:

>100_bases
CGCCATCGCGGTGCAGCCCAGCGGCGGCGATGAAGCGCGCCCGCGAAACATAGCGCTGCTCGCCATGATCCGCGCTTACT
AACCCTTGTTCCATTACGCC

Downstream 100 bases:

>100_bases
CCCACCACCGCAACACCACCCACAACGGAGCTACCACCATGCCCCAGGACTACCACCACGGCGTTCGCGTCATCGAAGTT
ACCAACGGCGGGCCGCCGAT

Product: bacteriophage-acquired protein

Products: NA

Alternate protein names: Phage Tail Fiber Assembly Protein; Bacteriophage-Acquired Protein; Tail Fiber Assembly Protein; Tail Fiber Assembly Protein Lambdoid Prophage E; Tail Assembly Chaperone Gp

Number of amino acids: Translated: 211; Mature: 211

Protein sequence:

>211_residues
MLVHHYNPTTGEYLSSGQPDADPLNNDRWLIPSNATLDAPPPRAATSWPFYRDGAWFLLPDYRGRRCYRTDTGEPVEIAV
AGKTPDELGLTDIPRPSPRHAWVDGAWVVPDSVIEAEKRAARQQTFDQLMANAKKANDGKADAYAAGLLDDEGIYYFKAW
SAYQMALVAAMNSTDASATITWPKTPAPYVAPVAEVAPQDVTPPEAPTKSA

Sequences:

>Translated_211_residues
MLVHHYNPTTGEYLSSGQPDADPLNNDRWLIPSNATLDAPPPRAATSWPFYRDGAWFLLPDYRGRRCYRTDTGEPVEIAV
AGKTPDELGLTDIPRPSPRHAWVDGAWVVPDSVIEAEKRAARQQTFDQLMANAKKANDGKADAYAAGLLDDEGIYYFKAW
SAYQMALVAAMNSTDASATITWPKTPAPYVAPVAEVAPQDVTPPEAPTKSA
>Mature_211_residues
MLVHHYNPTTGEYLSSGQPDADPLNNDRWLIPSNATLDAPPPRAATSWPFYRDGAWFLLPDYRGRRCYRTDTGEPVEIAV
AGKTPDELGLTDIPRPSPRHAWVDGAWVVPDSVIEAEKRAARQQTFDQLMANAKKANDGKADAYAAGLLDDEGIYYFKAW
SAYQMALVAAMNSTDASATITWPKTPAPYVAPVAEVAPQDVTPPEAPTKSA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23060; Mature: 23060

Theoretical pI: Translated: 4.62; Mature: 4.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVHHYNPTTGEYLSSGQPDADPLNNDRWLIPSNATLDAPPPRAATSWPFYRDGAWFLLP
CEEECCCCCCHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCEEECCEEEECC
DYRGRRCYRTDTGEPVEIAVAGKTPDELGLTDIPRPSPRHAWVDGAWVVPDSVIEAEKRA
CCCCCEEEECCCCCCEEEEEECCCCHHCCCCCCCCCCCCCEECCCEEECCHHHHHHHHHH
ARQQTFDQLMANAKKANDGKADAYAAGLLDDEGIYYFKAWSAYQMALVAAMNSTDASATI
HHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCEEEEEEHHHHHHHHHHHHCCCCCEEEE
TWPKTPAPYVAPVAEVAPQDVTPPEAPTKSA
ECCCCCCCCCCHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLVHHYNPTTGEYLSSGQPDADPLNNDRWLIPSNATLDAPPPRAATSWPFYRDGAWFLLP
CEEECCCCCCHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCEEECCEEEECC
DYRGRRCYRTDTGEPVEIAVAGKTPDELGLTDIPRPSPRHAWVDGAWVVPDSVIEAEKRA
CCCCCEEEECCCCCCEEEEEECCCCHHCCCCCCCCCCCCCEECCCEEECCHHHHHHHHHH
ARQQTFDQLMANAKKANDGKADAYAAGLLDDEGIYYFKAWSAYQMALVAAMNSTDASATI
HHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCEEEEEEHHHHHHHHHHHHCCCCCEEEE
TWPKTPAPYVAPVAEVAPQDVTPPEAPTKSA
ECCCCCCCCCCHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA