Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is stfR [C]

Identifier: 238025805

GI number: 238025805

Start: 138948

End: 141545

Strand: Reverse

Name: stfR [C]

Synonym: bglu_1g01300

Alternate gene names: 238025805

Gene position: 141545-138948 (Counterclockwise)

Preceding gene: 339905955

Following gene: 238025804

Centisome position: 3.62

GC content: 65.24

Gene sequence:

>2598_bases
ATGGCAGGAAATCTCATCCAGATTACGGATGCCGGCAGGGCGGCGCTCGTCGCCCCCGGCAATACCGGCACGGCGGCGCA
CCGCGTCGTGAGCATCGGGTTGGCGACGGCCTCCTTCGCGTTCGACCGCGCAATGCTGGCGATGCCCAACGAGCGCAAAC
GCATCATCACGTTCGGCGGCGAGAACGTCGCGGCGGACACTATCCACGTTGTGCTCCAGGACGACACGGACGACCAGTAC
GCGCTCTACGGATTTGGGCTCTATCTCGACAGCGGCGTGCTGTTCGGCGCCTACGTCCAGGACGCGCCGATCATGGAGAA
ATCGCCGGCCGCCATCCTGTTGCTCGCGGCCGATGCCGTGTTTTCCACCATCGACGCAGCCCAGCTCGAGTTCGGGCCGA
CCACCTTTCTTAATCCGCCTGCTACGACCGAGCGCCAGGGCGTGGTGGAGCTGGCAACCGTCGACGAAGTGGCCGCCGGC
GCCGACGCCACGCGCGCCGTAACGCCTCTTGGCGCGGCCAAGCGATATATGCCGATATCCGGCGGCATCTTTAGCGGCCC
CATTGCCGTACAGGCTTCCGTCGATACGAACAACGCGCAGGTTGTCGTGTCGCCGGCCGTTGGCAAGCTGGGCGCCGAAT
CGAAGGTTCGCTTCTCTGCTGCCTTTGGCGATCCGAAGTCCAACGACACCTCGCCTCGCGTCGTCGCGTCCGTGCGCGCC
GGATTCAATGGTGGTGTCTGGGGAAGCGAGTACCTCGACTTCCACCTCAACCGCGTCCCGAACGATGCAAGGGATGACGC
GAACATGGACCGCGCTTTGCGCCTCGCCGCTGGCGGCCGCGCCGTGATCGGCGCCACGCAGGACGACGGCGGCACCGCCC
TACAGGTCGGCGGCAGCGTTCGCGCGAACAACTATGGCATCGGCGACCAAAGCAGCAAGGCGTCCGGCCTGGTCGGAATC
AGCAACGGGACGAACGGCCCGAACGTCGGGTTCTATGGCCGCGAGTCGGTCGGTGGCGGCGCCATCACGTTGAGCACCGG
AGGTAAGGAAAGGCTTCGCCTGAAGGGCGACGGCAAGCTGCTGATCGGGACCGATACCCCTGACGCGTCGGCGGCCGTGC
TGCAAGTCGCCGGCGCAGCGTCCGTCACCGGCTCGATCATCGCGAACGGCACCAGTGCGTTCGCGCGTGGCGTGCAATCA
ACTGGACTCGACGACGGCGGCGGAAGCTTCCGCGCGACCAACGGCGGCTATGGTGCGTTCCTGCGCAACGACGGGTCGCA
CATGTACCTGCTATCGACCAAGAAGGGCGACCCGCTCGGCAGCTTCAACGATTACCGCCCCTTCGCGTGGGATCTCGATT
CTGGCTACGTCACGATCGATTACAACGGGCACGGCGCTTCTGTGGGCGGCGCCCTGAGCATCGCGATCTCGGCGAGCATC
GGCCGTGGACGTGACCAAGGCGTCATTTGGCTTGGTCCGCGCAACGACGGTTATCTGTATTCGACTGCCGACTCTTGCGG
CTGGTGGTACGGGGCGGCCGGTTCGGTTCAATATGTTTTCGGCGATCACTCCCTGCGCGTCGACAACCAGCCGGTGTGGC
ATGCCGGCAACCTCACTCCCCTCGACCGAAACGCAGGGGGCTGGATGGCCAGCGACGTGCATTTTGCTCCCGGCGCACGA
CTGGTACTCAGCGAAGGTAGCCCCGGTGCGCCCTCGCTCACGTTCGAGAATGACGGCGCGCCCGACACCGGCCTGTATCA
CGTTGCAGATGGTCAATTTGGTGTCACCTGCAACAGCCAGCCGATCGTCGGATTCGCACCTGACGGCACCCGGTTCACGA
GCAACGTATTCGGGCCAACGCCGGCCGCCGGCGACCGCTCGACGCGATTTGCCACCACCGAATGGGTGCTGTCCGCGCTG
TCGTCGTCGTCGATCGGCCAAATCGTGTTCGAGCCGCGCACCACGACGCGGGCCGGGTTTCTCAAGGCGAACGGTTCGCT
ACTTGAGCGGGCCGACTATCCGGCGCTATGGGCCTACGCTCAAGCGAGCGGCGCCCTGATTTCGGATGCCGCATGGTGGG
CCGGGCAATCGGGTTGCTTTTCTACTGGCACCACGGGCACGAATTTCCGCATCCCTGAGCTGCGCGGCGAATTTCTCCGT
TGCCTCGACGACGGGCGCGGCCTGGATACCAGCCGCGCGGCCGGGTCGCTGCAACTCAGCCAGAACGCCAAACACTCGCA
CGATGCGTCGTCTACCGTAGGTGGATCACATACCCACGGGGCGTTTACTACAGGCGCTGGTTCGCACAACCACGCTATCG
ACCAGCAGCCTCATGCACACGACACCTGGCTTGGTTCCGTGCAGGTTTCCGGTGTCGATCGTGGTGGCGGTTTCGGTCCC
TACAACGGTCGCGTGGGGGAAGCTTGGAGCGATCCGGCGAACGCCAACATCGCGATCCTTCCCACCGGCGACCACGTCCA
CGGTGCCGGCACCTATCCAGCCGGCGACCACAACCACGCCATCGCGGTGCAGCCCAGCGGCGGCGATGAAGCGCGCCCGC
GAAACATAGCGCTGCTCGCCATGATCCGCGCTTACTAA

Upstream 100 bases:

>100_bases
CACGCTCACGCAAGGATTCAGGCGCGAGCGCCCGGCAACGCATTGGCGCCGGCGCGCGCGCCGCGCTCTATCGCCGCCTG
AACCTCACGGATAAATGACC

Downstream 100 bases:

>100_bases
CCCTTGTTCCATTACGCCATGCTCGTTCACCACTACAACCCGACCACCGGCGAATACCTGTCCAGCGGCCAGCCGGACGC
CGACCCGCTCAACAACGATC

Product: phage-related tail fiber protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 865; Mature: 864

Protein sequence:

>865_residues
MAGNLIQITDAGRAALVAPGNTGTAAHRVVSIGLATASFAFDRAMLAMPNERKRIITFGGENVAADTIHVVLQDDTDDQY
ALYGFGLYLDSGVLFGAYVQDAPIMEKSPAAILLLAADAVFSTIDAAQLEFGPTTFLNPPATTERQGVVELATVDEVAAG
ADATRAVTPLGAAKRYMPISGGIFSGPIAVQASVDTNNAQVVVSPAVGKLGAESKVRFSAAFGDPKSNDTSPRVVASVRA
GFNGGVWGSEYLDFHLNRVPNDARDDANMDRALRLAAGGRAVIGATQDDGGTALQVGGSVRANNYGIGDQSSKASGLVGI
SNGTNGPNVGFYGRESVGGGAITLSTGGKERLRLKGDGKLLIGTDTPDASAAVLQVAGAASVTGSIIANGTSAFARGVQS
TGLDDGGGSFRATNGGYGAFLRNDGSHMYLLSTKKGDPLGSFNDYRPFAWDLDSGYVTIDYNGHGASVGGALSIAISASI
GRGRDQGVIWLGPRNDGYLYSTADSCGWWYGAAGSVQYVFGDHSLRVDNQPVWHAGNLTPLDRNAGGWMASDVHFAPGAR
LVLSEGSPGAPSLTFENDGAPDTGLYHVADGQFGVTCNSQPIVGFAPDGTRFTSNVFGPTPAAGDRSTRFATTEWVLSAL
SSSSIGQIVFEPRTTTRAGFLKANGSLLERADYPALWAYAQASGALISDAAWWAGQSGCFSTGTTGTNFRIPELRGEFLR
CLDDGRGLDTSRAAGSLQLSQNAKHSHDASSTVGGSHTHGAFTTGAGSHNHAIDQQPHAHDTWLGSVQVSGVDRGGGFGP
YNGRVGEAWSDPANANIAILPTGDHVHGAGTYPAGDHNHAIAVQPSGGDEARPRNIALLAMIRAY

Sequences:

>Translated_865_residues
MAGNLIQITDAGRAALVAPGNTGTAAHRVVSIGLATASFAFDRAMLAMPNERKRIITFGGENVAADTIHVVLQDDTDDQY
ALYGFGLYLDSGVLFGAYVQDAPIMEKSPAAILLLAADAVFSTIDAAQLEFGPTTFLNPPATTERQGVVELATVDEVAAG
ADATRAVTPLGAAKRYMPISGGIFSGPIAVQASVDTNNAQVVVSPAVGKLGAESKVRFSAAFGDPKSNDTSPRVVASVRA
GFNGGVWGSEYLDFHLNRVPNDARDDANMDRALRLAAGGRAVIGATQDDGGTALQVGGSVRANNYGIGDQSSKASGLVGI
SNGTNGPNVGFYGRESVGGGAITLSTGGKERLRLKGDGKLLIGTDTPDASAAVLQVAGAASVTGSIIANGTSAFARGVQS
TGLDDGGGSFRATNGGYGAFLRNDGSHMYLLSTKKGDPLGSFNDYRPFAWDLDSGYVTIDYNGHGASVGGALSIAISASI
GRGRDQGVIWLGPRNDGYLYSTADSCGWWYGAAGSVQYVFGDHSLRVDNQPVWHAGNLTPLDRNAGGWMASDVHFAPGAR
LVLSEGSPGAPSLTFENDGAPDTGLYHVADGQFGVTCNSQPIVGFAPDGTRFTSNVFGPTPAAGDRSTRFATTEWVLSAL
SSSSIGQIVFEPRTTTRAGFLKANGSLLERADYPALWAYAQASGALISDAAWWAGQSGCFSTGTTGTNFRIPELRGEFLR
CLDDGRGLDTSRAAGSLQLSQNAKHSHDASSTVGGSHTHGAFTTGAGSHNHAIDQQPHAHDTWLGSVQVSGVDRGGGFGP
YNGRVGEAWSDPANANIAILPTGDHVHGAGTYPAGDHNHAIAVQPSGGDEARPRNIALLAMIRAY
>Mature_864_residues
AGNLIQITDAGRAALVAPGNTGTAAHRVVSIGLATASFAFDRAMLAMPNERKRIITFGGENVAADTIHVVLQDDTDDQYA
LYGFGLYLDSGVLFGAYVQDAPIMEKSPAAILLLAADAVFSTIDAAQLEFGPTTFLNPPATTERQGVVELATVDEVAAGA
DATRAVTPLGAAKRYMPISGGIFSGPIAVQASVDTNNAQVVVSPAVGKLGAESKVRFSAAFGDPKSNDTSPRVVASVRAG
FNGGVWGSEYLDFHLNRVPNDARDDANMDRALRLAAGGRAVIGATQDDGGTALQVGGSVRANNYGIGDQSSKASGLVGIS
NGTNGPNVGFYGRESVGGGAITLSTGGKERLRLKGDGKLLIGTDTPDASAAVLQVAGAASVTGSIIANGTSAFARGVQST
GLDDGGGSFRATNGGYGAFLRNDGSHMYLLSTKKGDPLGSFNDYRPFAWDLDSGYVTIDYNGHGASVGGALSIAISASIG
RGRDQGVIWLGPRNDGYLYSTADSCGWWYGAAGSVQYVFGDHSLRVDNQPVWHAGNLTPLDRNAGGWMASDVHFAPGARL
VLSEGSPGAPSLTFENDGAPDTGLYHVADGQFGVTCNSQPIVGFAPDGTRFTSNVFGPTPAAGDRSTRFATTEWVLSALS
SSSIGQIVFEPRTTTRAGFLKANGSLLERADYPALWAYAQASGALISDAAWWAGQSGCFSTGTTGTNFRIPELRGEFLRC
LDDGRGLDTSRAAGSLQLSQNAKHSHDASSTVGGSHTHGAFTTGAGSHNHAIDQQPHAHDTWLGSVQVSGVDRGGGFGPY
NGRVGEAWSDPANANIAILPTGDHVHGAGTYPAGDHNHAIAVQPSGGDEARPRNIALLAMIRAY

Specific function: Unknown

COG id: COG5301

COG function: function code R; Phage-related tail fibre protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 89264; Mature: 89133

Theoretical pI: Translated: 5.65; Mature: 5.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGNLIQITDAGRAALVAPGNTGTAAHRVVSIGLATASFAFDRAMLAMPNERKRIITFGG
CCCCEEEEECCCCEEEEECCCCCHHHEEEEEEEEHHHHHHHHHHEECCCCCCCEEEEECC
ENVAADTIHVVLQDDTDDQYALYGFGLYLDSGVLFGAYVQDAPIMEKSPAAILLLAADAV
CCEECEEEEEEEECCCCCCEEEEEEEEEECCCEEEEEEECCCCCCCCCCCEEEEEECCHH
FSTIDAAQLEFGPTTFLNPPATTERQGVVELATVDEVAAGADATRAVTPLGAAKRYMPIS
HHHHCHHEEECCCCEECCCCCCCCCCCCEEEEEHHHHHCCCCCCCEECCCCCCCEEEECC
GGIFSGPIAVQASVDTNNAQVVVSPAVGKLGAESKVRFSAAFGDPKSNDTSPRVVASVRA
CCEECCCEEEEEEECCCCCEEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCEEEEEEEC
GFNGGVWGSEYLDFHLNRVPNDARDDANMDRALRLAAGGRAVIGATQDDGGTALQVGGSV
CCCCCCCCCHHHEEEHHCCCCCCCCCCCCCCEEEEECCCEEEEEECCCCCCCEEEECCEE
RANNYGIGDQSSKASGLVGISNGTNGPNVGFYGRESVGGGAITLSTGGKERLRLKGDGKL
EECCCCCCCCCCCCCCEEEECCCCCCCCCCEEECCCCCCCEEEEECCCCEEEEEECCCEE
LIGTDTPDASAAVLQVAGAASVTGSIIANGTSAFARGVQSTGLDDGGGSFRATNGGYGAF
EEECCCCCCCEEEEEECCCCCCCCEEEECCHHHHHHCHHHCCCCCCCCEEEECCCCEEEE
LRNDGSHMYLLSTKKGDPLGSFNDYRPFAWDLDSGYVTIDYNGHGASVGGALSIAISASI
EECCCCEEEEEECCCCCCCCCCCCCCCEEEECCCCEEEEEECCCCCCCCCEEEEEEEEEC
GRGRDQGVIWLGPRNDGYLYSTADSCGWWYGAAGSVQYVFGDHSLRVDNQPVWHAGNLTP
CCCCCCCEEEECCCCCCEEEECCCCCCEEECCCCEEEEEECCCEEEECCCCEEECCCCCC
LDRNAGGWMASDVHFAPGARLVLSEGSPGAPSLTFENDGAPDTGLYHVADGQFGVTCNSQ
CCCCCCCEEECCEEECCCCEEEEECCCCCCCEEEECCCCCCCCCEEEEECCEEEEEECCC
PIVGFAPDGTRFTSNVFGPTPAAGDRSTRFATTEWVLSALSSSSIGQIVFEPRTTTRAGF
CEEEECCCCCEEECCCCCCCCCCCCCCCEEEHHHHHHHHHCCCCCCEEEECCCCCCCEEE
LKANGSLLERADYPALWAYAQASGALISDAAWWAGQSGCFSTGTTGTNFRIPELRGEFLR
EEECCCHHHCCCCCEEEEEECCCCCEEECCHHHCCCCCCEECCCCCCCEECHHHHHHHHH
CLDDGRGLDTSRAAGSLQLSQNAKHSHDASSTVGGSHTHGAFTTGAGSHNHAIDQQPHAH
HHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCC
DTWLGSVQVSGVDRGGGFGPYNGRVGEAWSDPANANIAILPTGDHVHGAGTYPAGDHNHA
CCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCE
IAVQPSGGDEARPRNIALLAMIRAY
EEEECCCCCCCCCCCEEEEEEEECC
>Mature Secondary Structure 
AGNLIQITDAGRAALVAPGNTGTAAHRVVSIGLATASFAFDRAMLAMPNERKRIITFGG
CCCEEEEECCCCEEEEECCCCCHHHEEEEEEEEHHHHHHHHHHEECCCCCCCEEEEECC
ENVAADTIHVVLQDDTDDQYALYGFGLYLDSGVLFGAYVQDAPIMEKSPAAILLLAADAV
CCEECEEEEEEEECCCCCCEEEEEEEEEECCCEEEEEEECCCCCCCCCCCEEEEEECCHH
FSTIDAAQLEFGPTTFLNPPATTERQGVVELATVDEVAAGADATRAVTPLGAAKRYMPIS
HHHHCHHEEECCCCEECCCCCCCCCCCCEEEEEHHHHHCCCCCCCEECCCCCCCEEEECC
GGIFSGPIAVQASVDTNNAQVVVSPAVGKLGAESKVRFSAAFGDPKSNDTSPRVVASVRA
CCEECCCEEEEEEECCCCCEEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCEEEEEEEC
GFNGGVWGSEYLDFHLNRVPNDARDDANMDRALRLAAGGRAVIGATQDDGGTALQVGGSV
CCCCCCCCCHHHEEEHHCCCCCCCCCCCCCCEEEEECCCEEEEEECCCCCCCEEEECCEE
RANNYGIGDQSSKASGLVGISNGTNGPNVGFYGRESVGGGAITLSTGGKERLRLKGDGKL
EECCCCCCCCCCCCCCEEEECCCCCCCCCCEEECCCCCCCEEEEECCCCEEEEEECCCEE
LIGTDTPDASAAVLQVAGAASVTGSIIANGTSAFARGVQSTGLDDGGGSFRATNGGYGAF
EEECCCCCCCEEEEEECCCCCCCCEEEECCHHHHHHCHHHCCCCCCCCEEEECCCCEEEE
LRNDGSHMYLLSTKKGDPLGSFNDYRPFAWDLDSGYVTIDYNGHGASVGGALSIAISASI
EECCCCEEEEEECCCCCCCCCCCCCCCEEEECCCCEEEEEECCCCCCCCCEEEEEEEEEC
GRGRDQGVIWLGPRNDGYLYSTADSCGWWYGAAGSVQYVFGDHSLRVDNQPVWHAGNLTP
CCCCCCCEEEECCCCCCEEEECCCCCCEEECCCCEEEEEECCCEEEECCCCEEECCCCCC
LDRNAGGWMASDVHFAPGARLVLSEGSPGAPSLTFENDGAPDTGLYHVADGQFGVTCNSQ
CCCCCCCEEECCEEECCCCEEEEECCCCCCCEEEECCCCCCCCCEEEEECCEEEEEECCC
PIVGFAPDGTRFTSNVFGPTPAAGDRSTRFATTEWVLSALSSSSIGQIVFEPRTTTRAGF
CEEEECCCCCEEECCCCCCCCCCCCCCCEEEHHHHHHHHHCCCCCCEEEECCCCCCCEEE
LKANGSLLERADYPALWAYAQASGALISDAAWWAGQSGCFSTGTTGTNFRIPELRGEFLR
EEECCCHHHCCCCCEEEEEECCCCCEEECCHHHCCCCCCEECCCCCCCEECHHHHHHHHH
CLDDGRGLDTSRAAGSLQLSQNAKHSHDASSTVGGSHTHGAFTTGAGSHNHAIDQQPHAH
HHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCC
DTWLGSVQVSGVDRGGGFGPYNGRVGEAWSDPANANIAILPTGDHVHGAGTYPAGDHNHA
CCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCE
IAVQPSGGDEARPRNIALLAMIRAY
EEEECCCCCCCCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA