Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

Click here to switch to the map view.

The map label for this gene is 238025803

Identifier: 238025803

GI number: 238025803

Start: 137083

End: 138255

Strand: Reverse

Name: 238025803

Synonym: bglu_1g01280

Alternate gene names: NA

Gene position: 138255-137083 (Counterclockwise)

Preceding gene: 238025804

Following gene: 238025802

Centisome position: 3.54

GC content: 63.94

Gene sequence:

>1173_bases
ATGCCCCAGGACTACCACCACGGCGTTCGCGTCATCGAAGTTACCAACGGCGGGCCGCCGATCCGAACCGTGTCCACCGC
CGTGCTCGGCATTGTCTGCACCGCGTCGGACGCGAGCGATACCGCGTTCCCGCTCAACACGCCGGTGCTGATCACCAACG
TGATTTCCGCGCTCGGCCAGGCAGGCACGAAAGGCACGCTGCGCAAGACGCTCGACGCCATCGGCAAGCAGACGAAGCCG
GTTACGGTCGTCGTGCGCGTGCCCGATGGCAAGGATGAAGCCGAAACCACCTCGAACGTGATCGGCACCGTCACGGCAGA
CGGCAAATACACGGGCGCCAAGGCCCTGCTGACCGCCCAGGCAAAGCTGGGCGTGAAGCCGCGCATCCTGGTCGCGCCTG
GCCTCGATACGGCCGCCGTAGCCGCTGCTCTCGCGCCGATCGCGCAATCGCTGCGTGCGTTCGCCTACGTGTCGGCGAAC
GGCTGCAAGACCAAGGAGGAAGCCACGGCCTACCGTAAGCAGTTCGGTCAACGCGAAATCATGGTGATCTGGCCGGATTT
CATCGGCTGGGATGACACGACGAACGCCACCGCGATCATTCCGGCGCCGGCGATTGCGGCCGGCCTGCGCGCCAAGATCG
ACAACGACATCGGGTGGCACAAGACGATTTCGAACGTCGTCATCAACGGGGTGACCGGCATTTCGGCCGACGTGTCGTGG
GATCTGCAAGACCCGGCGACGGACGCCGGCTACCTCAACGAACACGAGGTGACAACGCTGGTCAACTACAACGGGTTCCG
CTTCTGGGGGTCGCGCACCTGCGCGGCTGATTCGAAGTTCGTGTTCGAGAACTACACGCGCAGCGCGCAGGTCATCGCCG
ATTCGATCGCCGAGGCGCAAATGGGGAACGTCGACGGTGCCCTCAACCCTTCGCTCGCGCGCGACATCATCGAGAACATC
AACAGCTGGTTCCGCCGCCAGGTTTCGAACGGCTACCTGATCGGCGGCCATTCCTGGTACGACCCGGAGCCGAACACCAA
TGACGTTCTGTCGGCCGGTCAGATGTACCTCGACTACGACTACACGCCGGTGCCGCCGCTCGAAAACCTGATGCTGCGCC
AGTACATCACCGACCGCTACCTCGCGACGTTCGCCGATCGCGTGACTGCATAA

Upstream 100 bases:

>100_bases
CCGTGGCCGAAGTGGCGCCGCAAGACGTGACACCGCCCGAGGCACCGACCAAGAGCGCGTAACCCACCACCGCAACACCA
CCCACAACGGAGCTACCACC

Downstream 100 bases:

>100_bases
CTAGGAGGACAAGACGATGGGCATGCCCCGCAAACTGAAAAACTTCATGCTGTTCTACAACGGCAACCGATTCGCCGGCG
ACGTCGATGAAATCGAGCTG

Product: bacteriophage major tail sheath protein

Products: NA

Alternate protein names: Phage Tail Sheath Protein; Bacteriophage Tail Sheath Protein; Phage Tail Sheath Protein; Phage Tail Sheath Protein FI; Tail Sheath Protein FI; Phage-Related Tail Sheath Protein; Phage-Related Tail Protein; Phage TAIL SHEATH PROTEIN; Phage Tail Sheath-Like Protein; Prophage; Prophage Tail Sheath; Phage P2 Tail Sheath FI-Like Protein; Tail Sheath Protein Bacteriophage; Bacteriophage Tail Sheath Protein; Bacteriophage P2 Tail Sheath Protein GPFI; Pyocin R2_PP Tail Sheath Protein GpFI; Pyocin R2_PP Tail Sheath Protein; Bacteriophage Tail Sheath Protein FI; Phage-Related Tail Sheath Protein; Bacteriophage Contractile Tail Sheath Protein; Bacteriophage P2 Tail Sheath Protein

Number of amino acids: Translated: 390; Mature: 389

Protein sequence:

>390_residues
MPQDYHHGVRVIEVTNGGPPIRTVSTAVLGIVCTASDASDTAFPLNTPVLITNVISALGQAGTKGTLRKTLDAIGKQTKP
VTVVVRVPDGKDEAETTSNVIGTVTADGKYTGAKALLTAQAKLGVKPRILVAPGLDTAAVAAALAPIAQSLRAFAYVSAN
GCKTKEEATAYRKQFGQREIMVIWPDFIGWDDTTNATAIIPAPAIAAGLRAKIDNDIGWHKTISNVVINGVTGISADVSW
DLQDPATDAGYLNEHEVTTLVNYNGFRFWGSRTCAADSKFVFENYTRSAQVIADSIAEAQMGNVDGALNPSLARDIIENI
NSWFRRQVSNGYLIGGHSWYDPEPNTNDVLSAGQMYLDYDYTPVPPLENLMLRQYITDRYLATFADRVTA

Sequences:

>Translated_390_residues
MPQDYHHGVRVIEVTNGGPPIRTVSTAVLGIVCTASDASDTAFPLNTPVLITNVISALGQAGTKGTLRKTLDAIGKQTKP
VTVVVRVPDGKDEAETTSNVIGTVTADGKYTGAKALLTAQAKLGVKPRILVAPGLDTAAVAAALAPIAQSLRAFAYVSAN
GCKTKEEATAYRKQFGQREIMVIWPDFIGWDDTTNATAIIPAPAIAAGLRAKIDNDIGWHKTISNVVINGVTGISADVSW
DLQDPATDAGYLNEHEVTTLVNYNGFRFWGSRTCAADSKFVFENYTRSAQVIADSIAEAQMGNVDGALNPSLARDIIENI
NSWFRRQVSNGYLIGGHSWYDPEPNTNDVLSAGQMYLDYDYTPVPPLENLMLRQYITDRYLATFADRVTA
>Mature_389_residues
PQDYHHGVRVIEVTNGGPPIRTVSTAVLGIVCTASDASDTAFPLNTPVLITNVISALGQAGTKGTLRKTLDAIGKQTKPV
TVVVRVPDGKDEAETTSNVIGTVTADGKYTGAKALLTAQAKLGVKPRILVAPGLDTAAVAAALAPIAQSLRAFAYVSANG
CKTKEEATAYRKQFGQREIMVIWPDFIGWDDTTNATAIIPAPAIAAGLRAKIDNDIGWHKTISNVVINGVTGISADVSWD
LQDPATDAGYLNEHEVTTLVNYNGFRFWGSRTCAADSKFVFENYTRSAQVIADSIAEAQMGNVDGALNPSLARDIIENIN
SWFRRQVSNGYLIGGHSWYDPEPNTNDVLSAGQMYLDYDYTPVPPLENLMLRQYITDRYLATFADRVTA

Specific function: Unknown

COG id: COG3497

COG function: function code R; Phage tail sheath protein FI

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41940; Mature: 41808

Theoretical pI: Translated: 5.21; Mature: 5.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPQDYHHGVRVIEVTNGGPPIRTVSTAVLGIVCTASDASDTAFPLNTPVLITNVISALGQ
CCCCCCCCEEEEEECCCCCCHHHHHHHHEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHC
AGTKGTLRKTLDAIGKQTKPVTVVVRVPDGKDEAETTSNVIGTVTADGKYTGAKALLTAQ
CCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHCCEEEEEECCCCCCCCHHEEEEH
AKLGVKPRILVAPGLDTAAVAAALAPIAQSLRAFAYVSANGCKTKEEATAYRKQFGQREI
HHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHCCCCEE
MVIWPDFIGWDDTTNATAIIPAPAIAAGLRAKIDNDIGWHKTISNVVINGVTGISADVSW
EEECCCCCCCCCCCCCEEEECCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCEEE
DLQDPATDAGYLNEHEVTTLVNYNGFRFWGSRTCAADSKFVFENYTRSAQVIADSIAEAQ
CCCCCCCCCCCCCCCCEEEEEECCCEEEECCCCCCCCCCHHHHHHCHHHHHHHHHHHHHH
MGNVDGALNPSLARDIIENINSWFRRQVSNGYLIGGHSWYDPEPNTNDVLSAGQMYLDYD
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCHHHHCCCCEEEECC
YTPVPPLENLMLRQYITDRYLATFADRVTA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PQDYHHGVRVIEVTNGGPPIRTVSTAVLGIVCTASDASDTAFPLNTPVLITNVISALGQ
CCCCCCCEEEEEECCCCCCHHHHHHHHEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHC
AGTKGTLRKTLDAIGKQTKPVTVVVRVPDGKDEAETTSNVIGTVTADGKYTGAKALLTAQ
CCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHCCEEEEEECCCCCCCCHHEEEEH
AKLGVKPRILVAPGLDTAAVAAALAPIAQSLRAFAYVSANGCKTKEEATAYRKQFGQREI
HHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHCCCCEE
MVIWPDFIGWDDTTNATAIIPAPAIAAGLRAKIDNDIGWHKTISNVVINGVTGISADVSW
EEECCCCCCCCCCCCCEEEECCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCEEE
DLQDPATDAGYLNEHEVTTLVNYNGFRFWGSRTCAADSKFVFENYTRSAQVIADSIAEAQ
CCCCCCCCCCCCCCCCEEEEEECCCEEEECCCCCCCCCCHHHHHHCHHHHHHHHHHHHHH
MGNVDGALNPSLARDIIENINSWFRRQVSNGYLIGGHSWYDPEPNTNDVLSAGQMYLDYD
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCHHHHCCCCEEEECC
YTPVPPLENLMLRQYITDRYLATFADRVTA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA