| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238025708
Identifier: 238025708
GI number: 238025708
Start: 29972
End: 31108
Strand: Reverse
Name: 238025708
Synonym: bglu_1g00300
Alternate gene names: NA
Gene position: 31108-29972 (Counterclockwise)
Preceding gene: 238025709
Following gene: 238025707
Centisome position: 0.8
GC content: 68.87
Gene sequence:
>1137_bases ATGACGATGCGCGCATCCGCCTTGCTTCATGATTCGCGCCGCTGCGGCCGCCGGGCTCGCCCGTCGCCGGCCCGCCAGCG CGGCGTGGCGATCATCAGCGCGCTGCTGGTGGTGGCGCTGACGGCGATCCTCGTGTCGGGCATGCTCTGGCGCCAGCAGA TCCAGATCCGCCGCATCGAGAACCAGCGGCTGCTGATGCAGGCGCAGTGGATCGCGCGCGGCGCGCTCGACTGGACCCGC ATGATCCTGCGCTCCGAGGGCGACACGGCGCCCGGCGTTACCTATCTCGGCGGCATCTGGACGGTGCCGATCGCGAAGAC GAAGCTGTCCGACTTCCTCGGCCGGATCGGCGTGACCGACACCTCCGGCGGCGACGATACTTACCTGTCGGGCGAGATCG AGGACGCACAGGCCAAGTACAACCTGCGCAACCTGGTGTCGACGCCGGCGCCGGGCGTGCTGCAGATCAGCGCCAGCCAG GTCGCCACCTTCAAGCGGCTGCTGATGTCGCTCGGCATCGACTCGCAGCTCGCGCTGCGCATCGCGCGGCAGATCCGCGC CGGCCTGCGCTACTCGGCCACCCGCTTTCAGACCGCCAGCGTGCCCGGCTCCGGCAACGTGCCGATTCCGCAGGGCGACA GCGGCAGCAATACCGGCCGTGGCGACCCCGGCTTCGACGACGGCAACGACACCGACGCTAGTTCGGGCGCCGCGCCGCTG GTGCCGACCAGCCTCGATTCGCTGCTCGACGTGAACGGCGTGACGCCCGAGATCATCGAGACGCTGCGCCCGTTCGTGAC GGTGCTGCCCACCGTCACGCCGGTCAATCTCAACACCGCGCGCGCCGAGGTGATCGCCGCGCTGATGCCGGGCCTGTCGG TGTCGTCGGCGCAGACCATCGTCGCGCACCGCGACACGGCGTTCTTCCGCAACGTCGGCGACGCACAGCTGGCGATGCAG TCCACCGGCGCGCCGAACGTGATGCTCGATCCGACCCAGATCGACGTGACGACCAGCTATTTCATCGTCCACGGCCGTAT CCAGCACGGGCGTGCGGAAATCGACCGCACCTCGCTCGTGTATCGTGATCCGACGACGCACACCACGCGCATCGTCCGGG TTGTCGATCAGCTATAA
Upstream 100 bases:
>100_bases TGGGCAACGCGCCGCCCGAGCGCTCGGTGACGGGCCTCGAGGTCGGCATCGGCGCGACCTCGCTGCGCGTGCCGGTCAAG CGCGTGTTCATGGTTGGGGA
Downstream 100 bases:
>100_bases CAACGCCATTCGGGAGAGGAGCTCTTGAGCACGTTGATCGTTGTACTGCCGCCGCGCGAACCCGCCGTGCCGCTGCCGGA ATGGCAGTGGCCCGAGCTGT
Product: general secretion pathway protein K
Products: NA
Alternate protein names: Type II Secretion System Protein; General Secretory Pathway Protein K; Type II Secretion System; Type II Secretory Pathway Component PulK; General Secretion Pathway Protein K/X; General Secretory Pathway K Transmembrane Protein
Number of amino acids: Translated: 378; Mature: 377
Protein sequence:
>378_residues MTMRASALLHDSRRCGRRARPSPARQRGVAIISALLVVALTAILVSGMLWRQQIQIRRIENQRLLMQAQWIARGALDWTR MILRSEGDTAPGVTYLGGIWTVPIAKTKLSDFLGRIGVTDTSGGDDTYLSGEIEDAQAKYNLRNLVSTPAPGVLQISASQ VATFKRLLMSLGIDSQLALRIARQIRAGLRYSATRFQTASVPGSGNVPIPQGDSGSNTGRGDPGFDDGNDTDASSGAAPL VPTSLDSLLDVNGVTPEIIETLRPFVTVLPTVTPVNLNTARAEVIAALMPGLSVSSAQTIVAHRDTAFFRNVGDAQLAMQ STGAPNVMLDPTQIDVTTSYFIVHGRIQHGRAEIDRTSLVYRDPTTHTTRIVRVVDQL
Sequences:
>Translated_378_residues MTMRASALLHDSRRCGRRARPSPARQRGVAIISALLVVALTAILVSGMLWRQQIQIRRIENQRLLMQAQWIARGALDWTR MILRSEGDTAPGVTYLGGIWTVPIAKTKLSDFLGRIGVTDTSGGDDTYLSGEIEDAQAKYNLRNLVSTPAPGVLQISASQ VATFKRLLMSLGIDSQLALRIARQIRAGLRYSATRFQTASVPGSGNVPIPQGDSGSNTGRGDPGFDDGNDTDASSGAAPL VPTSLDSLLDVNGVTPEIIETLRPFVTVLPTVTPVNLNTARAEVIAALMPGLSVSSAQTIVAHRDTAFFRNVGDAQLAMQ STGAPNVMLDPTQIDVTTSYFIVHGRIQHGRAEIDRTSLVYRDPTTHTTRIVRVVDQL >Mature_377_residues TMRASALLHDSRRCGRRARPSPARQRGVAIISALLVVALTAILVSGMLWRQQIQIRRIENQRLLMQAQWIARGALDWTRM ILRSEGDTAPGVTYLGGIWTVPIAKTKLSDFLGRIGVTDTSGGDDTYLSGEIEDAQAKYNLRNLVSTPAPGVLQISASQV ATFKRLLMSLGIDSQLALRIARQIRAGLRYSATRFQTASVPGSGNVPIPQGDSGSNTGRGDPGFDDGNDTDASSGAAPLV PTSLDSLLDVNGVTPEIIETLRPFVTVLPTVTPVNLNTARAEVIAALMPGLSVSSAQTIVAHRDTAFFRNVGDAQLAMQS TGAPNVMLDPTQIDVTTSYFIVHGRIQHGRAEIDRTSLVYRDPTTHTTRIVRVVDQL
Specific function: Unknown
COG id: COG3156
COG function: function code U; Type II secretory pathway, component PulK
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40732; Mature: 40601
Theoretical pI: Translated: 10.15; Mature: 10.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMRASALLHDSRRCGRRARPSPARQRGVAIISALLVVALTAILVSGMLWRQQIQIRRIE CCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC NQRLLMQAQWIARGALDWTRMILRSEGDTAPGVTYLGGIWTVPIAKTKLSDFLGRIGVTD CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCEEEECCHHHHHHHHHHHCCCCC TSGGDDTYLSGEIEDAQAKYNLRNLVSTPAPGVLQISASQVATFKRLLMSLGIDSQLALR CCCCCCCEECCCCCHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHHHCCCHHHHHH IARQIRAGLRYSATRFQTASVPGSGNVPIPQGDSGSNTGRGDPGFDDGNDTDASSGAAPL HHHHHHHCCCCCHHHEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC VPTSLDSLLDVNGVTPEIIETLRPFVTVLPTVTPVNLNTARAEVIAALMPGLSVSSAQTI CCCCHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEE VAHRDTAFFRNVGDAQLAMQSTGAPNVMLDPTQIDVTTSYFIVHGRIQHGRAEIDRTSLV EEECCHHHHHCCCCHHHHHHCCCCCCEEECCCEEEEEEEEEEEEEEECCCCHHHCCCEEE YRDPTTHTTRIVRVVDQL EECCCCHHHHHHHHHHCC >Mature Secondary Structure TMRASALLHDSRRCGRRARPSPARQRGVAIISALLVVALTAILVSGMLWRQQIQIRRIE CCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC NQRLLMQAQWIARGALDWTRMILRSEGDTAPGVTYLGGIWTVPIAKTKLSDFLGRIGVTD CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCEEEECCHHHHHHHHHHHCCCCC TSGGDDTYLSGEIEDAQAKYNLRNLVSTPAPGVLQISASQVATFKRLLMSLGIDSQLALR CCCCCCCEECCCCCHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHHHCCCHHHHHH IARQIRAGLRYSATRFQTASVPGSGNVPIPQGDSGSNTGRGDPGFDDGNDTDASSGAAPL HHHHHHHCCCCCHHHEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC VPTSLDSLLDVNGVTPEIIETLRPFVTVLPTVTPVNLNTARAEVIAALMPGLSVSSAQTI CCCCHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEE VAHRDTAFFRNVGDAQLAMQSTGAPNVMLDPTQIDVTTSYFIVHGRIQHGRAEIDRTSLV EEECCHHHHHCCCCHHHHHHCCCCCCEEECCCEEEEEEEEEEEEEEECCCCHHHCCCEEE YRDPTTHTTRIVRVVDQL EECCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA