| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238025707
Identifier: 238025707
GI number: 238025707
Start: 28535
End: 29947
Strand: Reverse
Name: 238025707
Synonym: bglu_1g00290
Alternate gene names: NA
Gene position: 29947-28535 (Counterclockwise)
Preceding gene: 238025708
Following gene: 238025706
Centisome position: 0.77
GC content: 73.46
Gene sequence:
>1413_bases TTGAGCACGTTGATCGTTGTACTGCCGCCGCGCGAACCCGCCGTGCCGCTGCCGGAATGGCAGTGGCCCGAGCTGTCGTT CGCGCTGCTCGACAAGAGCGGCCATGCGCAGCGCGCCGGCCGCAGTTCGCTCGCGACGCTGCCGCATGCGGCCTCGACGG TGCTCGTCGTGGCCGCCCGCGACCTGCTGCTGCTGGCCGCCGCGGTGCCCGCCGTGAAGGGGCCCAAGCTGCGCCAGGCG CTGCCGAACATCGTCGAGGACTACCTGATCCAGGACCCGCAGAGCTGCCACATCGCCGTCGATCCGGTCGCGCTGCCGGA CGGCCGGCGCGTGCTGGCGGTGATCGACCGCGAGTGGTTCCGCTTCGTGGTGGAGGCGTTCAAGGCGGCCGGCCATCGCG CGATCCGCGCCGTGCCGGCCACCCGCTGCCTGCCGGTGCCGGCCGAGATCGCGCTGGCGGCCGACACGGCCGAGCCGGCG CCGCTGCCCGACGGCGAGGCGGGCGAGCCCGGCGCCGCCGGCTCCGTCACCGAAGCCGCGGTGATCTCGCCGGCCGAGCC GCCCGCGCACGGCCTGCAGCCGGCACGCACGCCGATCATCGCCGCGGTCATGGCGCGCATCGAATCGGTGCCGATCGACG GCGAGATCGCGCTCGCCGCCGCGCCGCGCGTCGAACTCGCGATCGCGCGCGGCGCGCTCGGCGAAGGGCTGACCGCGCCG GCCGCCTCGGCCGGCTCGACGCTGGCGGCGCTGACCGCGGACGCGCCGTTCGAGCTCTACACGCTCGGCGCGCCCGGTGC GGAGCCGCAGCTCGCCTCCGTCACCACGCAGGCCGATCCCGACGCGATCCCCGGCACCACGCCGCTGCCGTTCGACGCGT TCGCGCGGCGCGCGCTCGAGACGCGCTTCAATCTCTGCCAGTTCGATTTCGAAGTGGTGCCGTGGCGCTTCGACCGCGCC ACGCTCACGCGCCTGAAGCTGCCGGCCGCGCTGGCGGTGGCCACGCTGGTGGTGGCGGTGATCGGCGTGAACCTGCACTG GTGGCGGCTCGCGCGCGAGCGCGACGCGATTTCCGCGCAGATCACCGAAACGCTGCTGACGGCGTTCCCGAAGACCACCA CGGTGCTCGATCCACCCGAGCAGATGACGCGTCAGATCGACCAGCTGCGAATCGCGGCGGGCGAGCTATCGCCGAACGAT TTCCTCGCGCTGGCGAGCGGCGTGGCGCGCTCGCTCGGGCCGCTGCCCGCCAACGGCATCGCCTCGCTCGACTACCACGA CCGCCGGCTCGACGTCGGCTTCAAGCCGCAGGTCAAGGTCGACCCCGATTTCGGCACGCGCCTCGCGCGCAACGGCCTGA CCGGCACGATCGACAGCAGCACGGGCAAATGGACCATCCGGAGCGGATCATGA
Upstream 100 bases:
>100_bases CGACCGCACCTCGCTCGTGTATCGTGATCCGACGACGCACACCACGCGCATCGTCCGGGTTGTCGATCAGCTATAACAAC GCCATTCGGGAGAGGAGCTC
Downstream 100 bases:
>100_bases AGTCGGAGTTGAACGAAACGCTGGCGCAGTTCTGGGACGAGCGCAACCCGCGCGAGAAGCTGCTGCTCGGCTGGGGTGGC GCGCTGCTGGTGGTGGTGGT
Product: general secretory pathway protein L
Products: NA
Alternate protein names: General Secretion Pathway L; General Secretory Pathway Protein L; General Secretory Pathway L Transmembrane Protein; General Secretion Pathway L Protein; Type II Secretory Pathway Component PulL
Number of amino acids: Translated: 470; Mature: 469
Protein sequence:
>470_residues MSTLIVVLPPREPAVPLPEWQWPELSFALLDKSGHAQRAGRSSLATLPHAASTVLVVAARDLLLLAAAVPAVKGPKLRQA LPNIVEDYLIQDPQSCHIAVDPVALPDGRRVLAVIDREWFRFVVEAFKAAGHRAIRAVPATRCLPVPAEIALAADTAEPA PLPDGEAGEPGAAGSVTEAAVISPAEPPAHGLQPARTPIIAAVMARIESVPIDGEIALAAAPRVELAIARGALGEGLTAP AASAGSTLAALTADAPFELYTLGAPGAEPQLASVTTQADPDAIPGTTPLPFDAFARRALETRFNLCQFDFEVVPWRFDRA TLTRLKLPAALAVATLVVAVIGVNLHWWRLARERDAISAQITETLLTAFPKTTTVLDPPEQMTRQIDQLRIAAGELSPND FLALASGVARSLGPLPANGIASLDYHDRRLDVGFKPQVKVDPDFGTRLARNGLTGTIDSSTGKWTIRSGS
Sequences:
>Translated_470_residues MSTLIVVLPPREPAVPLPEWQWPELSFALLDKSGHAQRAGRSSLATLPHAASTVLVVAARDLLLLAAAVPAVKGPKLRQA LPNIVEDYLIQDPQSCHIAVDPVALPDGRRVLAVIDREWFRFVVEAFKAAGHRAIRAVPATRCLPVPAEIALAADTAEPA PLPDGEAGEPGAAGSVTEAAVISPAEPPAHGLQPARTPIIAAVMARIESVPIDGEIALAAAPRVELAIARGALGEGLTAP AASAGSTLAALTADAPFELYTLGAPGAEPQLASVTTQADPDAIPGTTPLPFDAFARRALETRFNLCQFDFEVVPWRFDRA TLTRLKLPAALAVATLVVAVIGVNLHWWRLARERDAISAQITETLLTAFPKTTTVLDPPEQMTRQIDQLRIAAGELSPND FLALASGVARSLGPLPANGIASLDYHDRRLDVGFKPQVKVDPDFGTRLARNGLTGTIDSSTGKWTIRSGS >Mature_469_residues STLIVVLPPREPAVPLPEWQWPELSFALLDKSGHAQRAGRSSLATLPHAASTVLVVAARDLLLLAAAVPAVKGPKLRQAL PNIVEDYLIQDPQSCHIAVDPVALPDGRRVLAVIDREWFRFVVEAFKAAGHRAIRAVPATRCLPVPAEIALAADTAEPAP LPDGEAGEPGAAGSVTEAAVISPAEPPAHGLQPARTPIIAAVMARIESVPIDGEIALAAAPRVELAIARGALGEGLTAPA ASAGSTLAALTADAPFELYTLGAPGAEPQLASVTTQADPDAIPGTTPLPFDAFARRALETRFNLCQFDFEVVPWRFDRAT LTRLKLPAALAVATLVVAVIGVNLHWWRLARERDAISAQITETLLTAFPKTTTVLDPPEQMTRQIDQLRIAAGELSPNDF LALASGVARSLGPLPANGIASLDYHDRRLDVGFKPQVKVDPDFGTRLARNGLTGTIDSSTGKWTIRSGS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49574; Mature: 49443
Theoretical pI: Translated: 5.49; Mature: 5.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTLIVVLPPREPAVPLPEWQWPELSFALLDKSGHAQRAGRSSLATLPHAASTVLVVAAR CCEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCHHHCCCHHHHHCCCHHHHHHHHHHH DLLLLAAAVPAVKGPKLRQALPNIVEDYLIQDPQSCHIAVDPVALPDGRRVLAVIDREWF HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCEECCCCCEEEEEHHHHHH RFVVEAFKAAGHRAIRAVPATRCLPVPAEIALAADTAEPAPLPDGEAGEPGAAGSVTEAA HHHHHHHHHCCCCEEEECCCCCCCCCCHHEEEEECCCCCCCCCCCCCCCCCCCCCCCHHE VISPAEPPAHGLQPARTPIIAAVMARIESVPIDGEIALAAAPRVELAIARGALGEGLTAP EECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCEEEEEECCCCCCCCCCC AASAGSTLAALTADAPFELYTLGAPGAEPQLASVTTQADPDAIPGTTPLPFDAFARRALE CCCCCCEEEEEECCCCEEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHH TRFNLCQFDFEVVPWRFDRATLTRLKLPAALAVATLVVAVIGVNLHWWRLARERDAISAQ HHHHHEEECEEEECEEECCHHHHHHHCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH ITETLLTAFPKTTTVLDPPEQMTRQIDQLRIAAGELSPNDFLALASGVARSLGPLPANGI HHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCE ASLDYHDRRLDVGFKPQVKVDPDFGTRLARNGLTGTIDSSTGKWTIRSGS EECCCCCCEECCCCCCCEEECCCHHHHHHHCCCCEEEECCCCEEEEECCC >Mature Secondary Structure STLIVVLPPREPAVPLPEWQWPELSFALLDKSGHAQRAGRSSLATLPHAASTVLVVAAR CEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCHHHCCCHHHHHCCCHHHHHHHHHHH DLLLLAAAVPAVKGPKLRQALPNIVEDYLIQDPQSCHIAVDPVALPDGRRVLAVIDREWF HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCEECCCCCEEEEEHHHHHH RFVVEAFKAAGHRAIRAVPATRCLPVPAEIALAADTAEPAPLPDGEAGEPGAAGSVTEAA HHHHHHHHHCCCCEEEECCCCCCCCCCHHEEEEECCCCCCCCCCCCCCCCCCCCCCCHHE VISPAEPPAHGLQPARTPIIAAVMARIESVPIDGEIALAAAPRVELAIARGALGEGLTAP EECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCEEEEEECCCCCCCCCCC AASAGSTLAALTADAPFELYTLGAPGAEPQLASVTTQADPDAIPGTTPLPFDAFARRALE CCCCCCEEEEEECCCCEEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHH TRFNLCQFDFEVVPWRFDRATLTRLKLPAALAVATLVVAVIGVNLHWWRLARERDAISAQ HHHHHEEECEEEECEEECCHHHHHHHCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH ITETLLTAFPKTTTVLDPPEQMTRQIDQLRIAAGELSPNDFLALASGVARSLGPLPANGI HHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCE ASLDYHDRRLDVGFKPQVKVDPDFGTRLARNGLTGTIDSSTGKWTIRSGS EECCCCCCEECCCCCCCEEECCCHHHHHHHCCCCEEEECCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA