Definition Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence.
Accession NC_012721
Length 2,827,333

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The map label for this gene is 238025494

Identifier: 238025494

GI number: 238025494

Start: 2718152

End: 2719522

Strand: Direct

Name: 238025494

Synonym: bglu_2g21890

Alternate gene names: NA

Gene position: 2718152-2719522 (Clockwise)

Preceding gene: 238025493

Following gene: 238025495

Centisome position: 96.14

GC content: 64.55

Gene sequence:

>1371_bases
ATGGCACTGCTGGGAACAACCTGGCTAGACCAACTGCGCACCGCGTCATGGCGCGACGTGTCGTTCCAGGTCGACACGAT
CGAGATGACGGACGGCGACAACACGGTGATGCGTGAATACCCGTTCCAGGACATGCCCACCGTGTTCCGCATGGGCGCGG
GCGCGAACGAAATCAAGTTTTCGGCATACGTGGTCGGCGACGACTACCTGGACCAGCTCAATCGCCTGCGCCAGGTGCTG
ACTGGCGACGGCGTGTTGGTGCATCCGACGCAAGGCAGCATTCGCTGCTGGTGCAACGGCCAGTACACCGTCAAGGAAGC
GCCAGCATCCGAAGGCGGATGCGCACGCCTGGAATTGTCGTTCGTCCGCGCCGAGCCGCGCCGGTATCCGGCCGGCGTGA
CCAACACGGCCGACCAGGTGGCGGACGCGGCCGACAATGCCGAACAGTCGCTGCTCGATTCGCTGTCGGCTAATCTCGAC
CTGGCCAAGCTGACCGGTTGGGCGCACGACAACGTGCTGAGCCGGATCCGTTCGGGCCTGGACACGCTGTGGGACGGTAT
CTCGTTCGTGAACCGGATTTACGACACGTACAACAGCCTAGTGCGGCAGTACATCACGTTCCCGCTGAACGAGTTGGCCG
CGATCCCGTCGCTTCTCGGCCGCCGTATCTGCGACCTGACGAAAATTCCGGAAACGCTCACGTCAAATGAAGCGTGGTCC
GCATTCGGCGCAGCGCGCAACCTCTGGAAGGCGCCCACCGAGACGCGCAGCTTGCTGTCGCAGACGCCGTCGCCGTCCGG
GCTCCCGCAGGCCATCAGCCCCGCTATCGCGGCGGCTTACGCTCCGGCCGGATTCGTTCCATCCGCTGCCCAGGCGAAGC
TTGCCGAAGCCTTCACGCCGCCCGCGAGCCCCTACCAGACCGCTGCGCGCCAGGCCGAGGCACAGTCGTTGAAGACGTTG
GAGCGGTTTTTTAACGGCGTGGTCACGATCATGGCCGTGCGGGCAGTCGCACAGATCGAGCTGGGGAACTACGACCAGGC
GCTGGCGCTGCGCACGGACTTCAACCAGCAGATCACCGAACTGATTCTGGCGAGCGCGGCCGAGCCGGTTGGTGGTGTTG
GCGAGACGACGACTCACGACGCGCTGGTCCGTTTGAAAACGGCCGTGCTGGCCGACCTGCAGGCGCGATCGCGCGACCTT
GCCAGGTTGACCACGTATACGCCGGAGTCGTGGCAGCCGGCGCTGTACGTGTCCTATCGCATGTTTGGTACAACGCGCTG
GGCCGACGAGATCGTGGCCATGAATCCGCACATTCGCCATCCGCTGCTGGTGCCCGCTGACACGCCGCTGCGCGTCATCA
AGCACGACTGA

Upstream 100 bases:

>100_bases
CGTACGCGACGAGCGAATCATGACGACCGCGACTGTGACGCAGCAGCCGTTCGCACTGCGCGTCGACGCAGGCTCAACCA
ACCCGGGAGGTTTTTAAGCG

Downstream 100 bases:

>100_bases
ACCATGGCGACGAAACCCGAGCAATTCACCCGCGACGACGCAAAAATCTATGTGACCGTGAACGGTCGCGATTATCAGGG
CTGGCTGTCGTCCAACATCG

Product: DNA circulation-like protein

Products: NA

Alternate protein names: Phage Tail/DNA Circulation Protein; DNA Circulation Family Protein; DNA Circulation-Like Protein; DNA Circulation N-Terminal; DNA Circulation Protein N-Terminal Domain Protein; Phage FluMu DNA Circulation Protein; Phage Tail Protein; DNA Circulation-Like

Number of amino acids: Translated: 456; Mature: 455

Protein sequence:

>456_residues
MALLGTTWLDQLRTASWRDVSFQVDTIEMTDGDNTVMREYPFQDMPTVFRMGAGANEIKFSAYVVGDDYLDQLNRLRQVL
TGDGVLVHPTQGSIRCWCNGQYTVKEAPASEGGCARLELSFVRAEPRRYPAGVTNTADQVADAADNAEQSLLDSLSANLD
LAKLTGWAHDNVLSRIRSGLDTLWDGISFVNRIYDTYNSLVRQYITFPLNELAAIPSLLGRRICDLTKIPETLTSNEAWS
AFGAARNLWKAPTETRSLLSQTPSPSGLPQAISPAIAAAYAPAGFVPSAAQAKLAEAFTPPASPYQTAARQAEAQSLKTL
ERFFNGVVTIMAVRAVAQIELGNYDQALALRTDFNQQITELILASAAEPVGGVGETTTHDALVRLKTAVLADLQARSRDL
ARLTTYTPESWQPALYVSYRMFGTTRWADEIVAMNPHIRHPLLVPADTPLRVIKHD

Sequences:

>Translated_456_residues
MALLGTTWLDQLRTASWRDVSFQVDTIEMTDGDNTVMREYPFQDMPTVFRMGAGANEIKFSAYVVGDDYLDQLNRLRQVL
TGDGVLVHPTQGSIRCWCNGQYTVKEAPASEGGCARLELSFVRAEPRRYPAGVTNTADQVADAADNAEQSLLDSLSANLD
LAKLTGWAHDNVLSRIRSGLDTLWDGISFVNRIYDTYNSLVRQYITFPLNELAAIPSLLGRRICDLTKIPETLTSNEAWS
AFGAARNLWKAPTETRSLLSQTPSPSGLPQAISPAIAAAYAPAGFVPSAAQAKLAEAFTPPASPYQTAARQAEAQSLKTL
ERFFNGVVTIMAVRAVAQIELGNYDQALALRTDFNQQITELILASAAEPVGGVGETTTHDALVRLKTAVLADLQARSRDL
ARLTTYTPESWQPALYVSYRMFGTTRWADEIVAMNPHIRHPLLVPADTPLRVIKHD
>Mature_455_residues
ALLGTTWLDQLRTASWRDVSFQVDTIEMTDGDNTVMREYPFQDMPTVFRMGAGANEIKFSAYVVGDDYLDQLNRLRQVLT
GDGVLVHPTQGSIRCWCNGQYTVKEAPASEGGCARLELSFVRAEPRRYPAGVTNTADQVADAADNAEQSLLDSLSANLDL
AKLTGWAHDNVLSRIRSGLDTLWDGISFVNRIYDTYNSLVRQYITFPLNELAAIPSLLGRRICDLTKIPETLTSNEAWSA
FGAARNLWKAPTETRSLLSQTPSPSGLPQAISPAIAAAYAPAGFVPSAAQAKLAEAFTPPASPYQTAARQAEAQSLKTLE
RFFNGVVTIMAVRAVAQIELGNYDQALALRTDFNQQITELILASAAEPVGGVGETTTHDALVRLKTAVLADLQARSRDLA
RLTTYTPESWQPALYVSYRMFGTTRWADEIVAMNPHIRHPLLVPADTPLRVIKHD

Specific function: Unknown

COG id: COG4228

COG function: function code R; Mu-like prophage DNA circulation protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50007; Mature: 49876

Theoretical pI: Translated: 5.15; Mature: 5.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALLGTTWLDQLRTASWRDVSFQVDTIEMTDGDNTVMREYPFQDMPTVFRMGAGANEIKF
CCCCCHHHHHHHHCCCCCCEEEEEEEEEECCCCCCEEECCCCCCCCHHHHCCCCCCCEEE
SAYVVGDDYLDQLNRLRQVLTGDGVLVHPTQGSIRCWCNGQYTVKEAPASEGGCARLELS
EEEEECHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEECCEEEEECCCCCCCCEEEEEEE
FVRAEPRRYPAGVTNTADQVADAADNAEQSLLDSLSANLDLAKLTGWAHDNVLSRIRSGL
EECCCCCCCCCCCCCCHHHHHHHHCHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHH
DTLWDGISFVNRIYDTYNSLVRQYITFPLNELAAIPSLLGRRICDLTKIPETLTSNEAWS
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHCCCCHHH
AFGAARNLWKAPTETRSLLSQTPSPSGLPQAISPAIAAAYAPAGFVPSAAQAKLAEAFTP
HHHHHHHHHCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCC
PASPYQTAARQAEAQSLKTLERFFNGVVTIMAVRAVAQIELGNYDQALALRTDFNQQITE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHH
LILASAAEPVGGVGETTTHDALVRLKTAVLADLQARSRDLARLTTYTPESWQPALYVSYR
HHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEE
MFGTTRWADEIVAMNPHIRHPLLVPADTPLRVIKHD
ECCCHHHHHHHHCCCCCCCCCEEECCCCCCEEECCC
>Mature Secondary Structure 
ALLGTTWLDQLRTASWRDVSFQVDTIEMTDGDNTVMREYPFQDMPTVFRMGAGANEIKF
CCCCHHHHHHHHCCCCCCEEEEEEEEEECCCCCCEEECCCCCCCCHHHHCCCCCCCEEE
SAYVVGDDYLDQLNRLRQVLTGDGVLVHPTQGSIRCWCNGQYTVKEAPASEGGCARLELS
EEEEECHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEECCEEEEECCCCCCCCEEEEEEE
FVRAEPRRYPAGVTNTADQVADAADNAEQSLLDSLSANLDLAKLTGWAHDNVLSRIRSGL
EECCCCCCCCCCCCCCHHHHHHHHCHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHH
DTLWDGISFVNRIYDTYNSLVRQYITFPLNELAAIPSLLGRRICDLTKIPETLTSNEAWS
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHCCCCHHH
AFGAARNLWKAPTETRSLLSQTPSPSGLPQAISPAIAAAYAPAGFVPSAAQAKLAEAFTP
HHHHHHHHHCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCC
PASPYQTAARQAEAQSLKTLERFFNGVVTIMAVRAVAQIELGNYDQALALRTDFNQQITE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHH
LILASAAEPVGGVGETTTHDALVRLKTAVLADLQARSRDLARLTTYTPESWQPALYVSYR
HHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEE
MFGTTRWADEIVAMNPHIRHPLLVPADTPLRVIKHD
ECCCHHHHHHHHCCCCCCCCCEEECCCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA