| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238025494
Identifier: 238025494
GI number: 238025494
Start: 2718152
End: 2719522
Strand: Direct
Name: 238025494
Synonym: bglu_2g21890
Alternate gene names: NA
Gene position: 2718152-2719522 (Clockwise)
Preceding gene: 238025493
Following gene: 238025495
Centisome position: 96.14
GC content: 64.55
Gene sequence:
>1371_bases ATGGCACTGCTGGGAACAACCTGGCTAGACCAACTGCGCACCGCGTCATGGCGCGACGTGTCGTTCCAGGTCGACACGAT CGAGATGACGGACGGCGACAACACGGTGATGCGTGAATACCCGTTCCAGGACATGCCCACCGTGTTCCGCATGGGCGCGG GCGCGAACGAAATCAAGTTTTCGGCATACGTGGTCGGCGACGACTACCTGGACCAGCTCAATCGCCTGCGCCAGGTGCTG ACTGGCGACGGCGTGTTGGTGCATCCGACGCAAGGCAGCATTCGCTGCTGGTGCAACGGCCAGTACACCGTCAAGGAAGC GCCAGCATCCGAAGGCGGATGCGCACGCCTGGAATTGTCGTTCGTCCGCGCCGAGCCGCGCCGGTATCCGGCCGGCGTGA CCAACACGGCCGACCAGGTGGCGGACGCGGCCGACAATGCCGAACAGTCGCTGCTCGATTCGCTGTCGGCTAATCTCGAC CTGGCCAAGCTGACCGGTTGGGCGCACGACAACGTGCTGAGCCGGATCCGTTCGGGCCTGGACACGCTGTGGGACGGTAT CTCGTTCGTGAACCGGATTTACGACACGTACAACAGCCTAGTGCGGCAGTACATCACGTTCCCGCTGAACGAGTTGGCCG CGATCCCGTCGCTTCTCGGCCGCCGTATCTGCGACCTGACGAAAATTCCGGAAACGCTCACGTCAAATGAAGCGTGGTCC GCATTCGGCGCAGCGCGCAACCTCTGGAAGGCGCCCACCGAGACGCGCAGCTTGCTGTCGCAGACGCCGTCGCCGTCCGG GCTCCCGCAGGCCATCAGCCCCGCTATCGCGGCGGCTTACGCTCCGGCCGGATTCGTTCCATCCGCTGCCCAGGCGAAGC TTGCCGAAGCCTTCACGCCGCCCGCGAGCCCCTACCAGACCGCTGCGCGCCAGGCCGAGGCACAGTCGTTGAAGACGTTG GAGCGGTTTTTTAACGGCGTGGTCACGATCATGGCCGTGCGGGCAGTCGCACAGATCGAGCTGGGGAACTACGACCAGGC GCTGGCGCTGCGCACGGACTTCAACCAGCAGATCACCGAACTGATTCTGGCGAGCGCGGCCGAGCCGGTTGGTGGTGTTG GCGAGACGACGACTCACGACGCGCTGGTCCGTTTGAAAACGGCCGTGCTGGCCGACCTGCAGGCGCGATCGCGCGACCTT GCCAGGTTGACCACGTATACGCCGGAGTCGTGGCAGCCGGCGCTGTACGTGTCCTATCGCATGTTTGGTACAACGCGCTG GGCCGACGAGATCGTGGCCATGAATCCGCACATTCGCCATCCGCTGCTGGTGCCCGCTGACACGCCGCTGCGCGTCATCA AGCACGACTGA
Upstream 100 bases:
>100_bases CGTACGCGACGAGCGAATCATGACGACCGCGACTGTGACGCAGCAGCCGTTCGCACTGCGCGTCGACGCAGGCTCAACCA ACCCGGGAGGTTTTTAAGCG
Downstream 100 bases:
>100_bases ACCATGGCGACGAAACCCGAGCAATTCACCCGCGACGACGCAAAAATCTATGTGACCGTGAACGGTCGCGATTATCAGGG CTGGCTGTCGTCCAACATCG
Product: DNA circulation-like protein
Products: NA
Alternate protein names: Phage Tail/DNA Circulation Protein; DNA Circulation Family Protein; DNA Circulation-Like Protein; DNA Circulation N-Terminal; DNA Circulation Protein N-Terminal Domain Protein; Phage FluMu DNA Circulation Protein; Phage Tail Protein; DNA Circulation-Like
Number of amino acids: Translated: 456; Mature: 455
Protein sequence:
>456_residues MALLGTTWLDQLRTASWRDVSFQVDTIEMTDGDNTVMREYPFQDMPTVFRMGAGANEIKFSAYVVGDDYLDQLNRLRQVL TGDGVLVHPTQGSIRCWCNGQYTVKEAPASEGGCARLELSFVRAEPRRYPAGVTNTADQVADAADNAEQSLLDSLSANLD LAKLTGWAHDNVLSRIRSGLDTLWDGISFVNRIYDTYNSLVRQYITFPLNELAAIPSLLGRRICDLTKIPETLTSNEAWS AFGAARNLWKAPTETRSLLSQTPSPSGLPQAISPAIAAAYAPAGFVPSAAQAKLAEAFTPPASPYQTAARQAEAQSLKTL ERFFNGVVTIMAVRAVAQIELGNYDQALALRTDFNQQITELILASAAEPVGGVGETTTHDALVRLKTAVLADLQARSRDL ARLTTYTPESWQPALYVSYRMFGTTRWADEIVAMNPHIRHPLLVPADTPLRVIKHD
Sequences:
>Translated_456_residues MALLGTTWLDQLRTASWRDVSFQVDTIEMTDGDNTVMREYPFQDMPTVFRMGAGANEIKFSAYVVGDDYLDQLNRLRQVL TGDGVLVHPTQGSIRCWCNGQYTVKEAPASEGGCARLELSFVRAEPRRYPAGVTNTADQVADAADNAEQSLLDSLSANLD LAKLTGWAHDNVLSRIRSGLDTLWDGISFVNRIYDTYNSLVRQYITFPLNELAAIPSLLGRRICDLTKIPETLTSNEAWS AFGAARNLWKAPTETRSLLSQTPSPSGLPQAISPAIAAAYAPAGFVPSAAQAKLAEAFTPPASPYQTAARQAEAQSLKTL ERFFNGVVTIMAVRAVAQIELGNYDQALALRTDFNQQITELILASAAEPVGGVGETTTHDALVRLKTAVLADLQARSRDL ARLTTYTPESWQPALYVSYRMFGTTRWADEIVAMNPHIRHPLLVPADTPLRVIKHD >Mature_455_residues ALLGTTWLDQLRTASWRDVSFQVDTIEMTDGDNTVMREYPFQDMPTVFRMGAGANEIKFSAYVVGDDYLDQLNRLRQVLT GDGVLVHPTQGSIRCWCNGQYTVKEAPASEGGCARLELSFVRAEPRRYPAGVTNTADQVADAADNAEQSLLDSLSANLDL AKLTGWAHDNVLSRIRSGLDTLWDGISFVNRIYDTYNSLVRQYITFPLNELAAIPSLLGRRICDLTKIPETLTSNEAWSA FGAARNLWKAPTETRSLLSQTPSPSGLPQAISPAIAAAYAPAGFVPSAAQAKLAEAFTPPASPYQTAARQAEAQSLKTLE RFFNGVVTIMAVRAVAQIELGNYDQALALRTDFNQQITELILASAAEPVGGVGETTTHDALVRLKTAVLADLQARSRDLA RLTTYTPESWQPALYVSYRMFGTTRWADEIVAMNPHIRHPLLVPADTPLRVIKHD
Specific function: Unknown
COG id: COG4228
COG function: function code R; Mu-like prophage DNA circulation protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50007; Mature: 49876
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALLGTTWLDQLRTASWRDVSFQVDTIEMTDGDNTVMREYPFQDMPTVFRMGAGANEIKF CCCCCHHHHHHHHCCCCCCEEEEEEEEEECCCCCCEEECCCCCCCCHHHHCCCCCCCEEE SAYVVGDDYLDQLNRLRQVLTGDGVLVHPTQGSIRCWCNGQYTVKEAPASEGGCARLELS EEEEECHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEECCEEEEECCCCCCCCEEEEEEE FVRAEPRRYPAGVTNTADQVADAADNAEQSLLDSLSANLDLAKLTGWAHDNVLSRIRSGL EECCCCCCCCCCCCCCHHHHHHHHCHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHH DTLWDGISFVNRIYDTYNSLVRQYITFPLNELAAIPSLLGRRICDLTKIPETLTSNEAWS HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHCCCCHHH AFGAARNLWKAPTETRSLLSQTPSPSGLPQAISPAIAAAYAPAGFVPSAAQAKLAEAFTP HHHHHHHHHCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCC PASPYQTAARQAEAQSLKTLERFFNGVVTIMAVRAVAQIELGNYDQALALRTDFNQQITE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHH LILASAAEPVGGVGETTTHDALVRLKTAVLADLQARSRDLARLTTYTPESWQPALYVSYR HHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEE MFGTTRWADEIVAMNPHIRHPLLVPADTPLRVIKHD ECCCHHHHHHHHCCCCCCCCCEEECCCCCCEEECCC >Mature Secondary Structure ALLGTTWLDQLRTASWRDVSFQVDTIEMTDGDNTVMREYPFQDMPTVFRMGAGANEIKF CCCCHHHHHHHHCCCCCCEEEEEEEEEECCCCCCEEECCCCCCCCHHHHCCCCCCCEEE SAYVVGDDYLDQLNRLRQVLTGDGVLVHPTQGSIRCWCNGQYTVKEAPASEGGCARLELS EEEEECHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEECCEEEEECCCCCCCCEEEEEEE FVRAEPRRYPAGVTNTADQVADAADNAEQSLLDSLSANLDLAKLTGWAHDNVLSRIRSGL EECCCCCCCCCCCCCCHHHHHHHHCHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHH DTLWDGISFVNRIYDTYNSLVRQYITFPLNELAAIPSLLGRRICDLTKIPETLTSNEAWS HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHCCCCHHH AFGAARNLWKAPTETRSLLSQTPSPSGLPQAISPAIAAAYAPAGFVPSAAQAKLAEAFTP HHHHHHHHHCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCC PASPYQTAARQAEAQSLKTLERFFNGVVTIMAVRAVAQIELGNYDQALALRTDFNQQITE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHH LILASAAEPVGGVGETTTHDALVRLKTAVLADLQARSRDLARLTTYTPESWQPALYVSYR HHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEE MFGTTRWADEIVAMNPHIRHPLLVPADTPLRVIKHD ECCCHHHHHHHHCCCCCCCCCEEECCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA