| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
Click here to switch to the map view.
The map label for this gene is 238025495
Identifier: 238025495
GI number: 238025495
Start: 2719526
End: 2720695
Strand: Direct
Name: 238025495
Synonym: bglu_2g21900
Alternate gene names: NA
Gene position: 2719526-2720695 (Clockwise)
Preceding gene: 238025494
Following gene: 238025496
Centisome position: 96.19
GC content: 62.22
Gene sequence:
>1170_bases ATGGCGACGAAACCCGAGCAATTCACCCGCGACGACGCAAAAATCTATGTGACCGTGAACGGTCGCGATTATCAGGGCTG GCTGTCGTCCAACATCGAGCGCTCGCTGGAAACGCTGTCCAGCCGCTTCACCATCCCGGTGTCGCTGATTCCGGGCAATC CGCCCAACATCAAGCGGCAGGACGCGATCAAGGTCCGCATCAACGACACCCTGGTCGTGACCGGCACTGTGCTGGCCGCC GAACCGTTCTATAAGCGGGACGATTGCGGTCTGAAAGTCGAGGGGCGCAGCCGCAGCGGCGACCTGGTGGCGTGCTCGGC GATCTACCAGGGCGGACAGTGGCGCAATGCGAAGCTGGACCGTATCGCGCGAGATCTGTGTACGCCGTTCGGCATCGACG TGACGATCGACACCGACATCGGCGCACCGATCCGCGACCTCAAGGTCGAGCATAGCGAAACGGTGGTCGACGTGCTGTCG CGCGCGGCGCGCCTGCGCGGTGTGCTGGTCACGACCGATGCGCAAGGGCGCGTGCTCATCACGAGGGCCGGCAAGGAAAA GAGCCACGGCGCAATCGTGCGCGGTGTGAACGTCATCAGCATGGAAAGCGTCGGCACCGATGCCGAGCGGCATTCGGACT ATTTTTGCTACGGCCAGGGCAACGTCACGCACCGGTCCAGCCTGCAGACGCTGGAAGTTGGCAGTACGGCCGCCGATCCA GTCAAGGCGTTCAAGAAAGCCATCCAGCAGAAGGCGCAAGCGAAAGACCCGGAAATGAGGCGGTATCTGCCGCTGGTCAT CAACGCGAACGGCAACAACGACGCGTCCGATATGCAGCGCCTGGTCGACCACACAATGCGTGTGCGGCGCGGGCATGCGT ACGGCCTGAAATACGTAGTCGAAGGCTGGACGTGGAAAGGCAAGCCGTGGGAGATCAATACGCGCGTGCCGATTTACGAC GACATCGCCGGCCTGGACGGCGACGAATGGCTGATCTGCGAGGTGAAGCAGAGCGTCGAACTGAAGGAAGGCGACGTAAC CGAGTTGCTGGTTCGGCCGAAAGAGGCATACGACACGGGGCCGCTGAAGACCAAGATGAAACGGCGTCAAGGCAAAGGCA AACGCGGCAAGGATGGCGCGGTGCTCGAAGTCAAGGGAGACCCGTCGTGA
Upstream 100 bases:
>100_bases GCGCTGGGCCGACGAGATCGTGGCCATGAATCCGCACATTCGCCATCCGCTGCTGGTGCCCGCTGACACGCCGCTGCGCG TCATCAAGCACGACTGAACC
Downstream 100 bases:
>100_bases ACCTGCTCAACATGTTGCGCCGCGCGCTGATGCGTGGCTTGAAGGAAGGCCCGGTGCAAGAGGTCGCGGTGCAGGTGTTC GACTCGACCGGCCGGGAGAA
Product: bacteriophage Mu P family protein
Products: NA
Alternate protein names: Bacteriophage Mu P Protein; Mu P Family Protein; Bacteriophage Mu P; Phage Tail Protein; Bacteriophage Tail Protein; Mu-Like Prophage Tail Protein GpP; Mu-Like Prophage Tail Protein; Bacteriophage Mu P Family Protein; Prophage; Mu-Like Phage Tail Protein GpP; Bacteriophage V Tail Protein; Bacteriophage Tail Protein GpP Mu-Like; Phage Baseplate Protein
Number of amino acids: Translated: 389; Mature: 388
Protein sequence:
>389_residues MATKPEQFTRDDAKIYVTVNGRDYQGWLSSNIERSLETLSSRFTIPVSLIPGNPPNIKRQDAIKVRINDTLVVTGTVLAA EPFYKRDDCGLKVEGRSRSGDLVACSAIYQGGQWRNAKLDRIARDLCTPFGIDVTIDTDIGAPIRDLKVEHSETVVDVLS RAARLRGVLVTTDAQGRVLITRAGKEKSHGAIVRGVNVISMESVGTDAERHSDYFCYGQGNVTHRSSLQTLEVGSTAADP VKAFKKAIQQKAQAKDPEMRRYLPLVINANGNNDASDMQRLVDHTMRVRRGHAYGLKYVVEGWTWKGKPWEINTRVPIYD DIAGLDGDEWLICEVKQSVELKEGDVTELLVRPKEAYDTGPLKTKMKRRQGKGKRGKDGAVLEVKGDPS
Sequences:
>Translated_389_residues MATKPEQFTRDDAKIYVTVNGRDYQGWLSSNIERSLETLSSRFTIPVSLIPGNPPNIKRQDAIKVRINDTLVVTGTVLAA EPFYKRDDCGLKVEGRSRSGDLVACSAIYQGGQWRNAKLDRIARDLCTPFGIDVTIDTDIGAPIRDLKVEHSETVVDVLS RAARLRGVLVTTDAQGRVLITRAGKEKSHGAIVRGVNVISMESVGTDAERHSDYFCYGQGNVTHRSSLQTLEVGSTAADP VKAFKKAIQQKAQAKDPEMRRYLPLVINANGNNDASDMQRLVDHTMRVRRGHAYGLKYVVEGWTWKGKPWEINTRVPIYD DIAGLDGDEWLICEVKQSVELKEGDVTELLVRPKEAYDTGPLKTKMKRRQGKGKRGKDGAVLEVKGDPS >Mature_388_residues ATKPEQFTRDDAKIYVTVNGRDYQGWLSSNIERSLETLSSRFTIPVSLIPGNPPNIKRQDAIKVRINDTLVVTGTVLAAE PFYKRDDCGLKVEGRSRSGDLVACSAIYQGGQWRNAKLDRIARDLCTPFGIDVTIDTDIGAPIRDLKVEHSETVVDVLSR AARLRGVLVTTDAQGRVLITRAGKEKSHGAIVRGVNVISMESVGTDAERHSDYFCYGQGNVTHRSSLQTLEVGSTAADPV KAFKKAIQQKAQAKDPEMRRYLPLVINANGNNDASDMQRLVDHTMRVRRGHAYGLKYVVEGWTWKGKPWEINTRVPIYDD IAGLDGDEWLICEVKQSVELKEGDVTELLVRPKEAYDTGPLKTKMKRRQGKGKRGKDGAVLEVKGDPS
Specific function: Unknown
COG id: COG4379
COG function: function code R; Mu-like prophage tail protein gpP
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43150; Mature: 43018
Theoretical pI: Translated: 9.37; Mature: 9.37
Prosite motif: PS00430 TONB_DEPENDENT_REC_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATKPEQFTRDDAKIYVTVNGRDYQGWLSSNIERSLETLSSRFTIPVSLIPGNPPNIKRQ CCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCEEEEEEEECCCCCCCCCC DAIKVRINDTLVVTGTVLAAEPFYKRDDCGLKVEGRSRSGDLVACSAIYQGGQWRNAKLD CEEEEEECCEEEEEEEEEECCCCCCCCCCCEEEECCCCCCCEEEEEEHHCCCCCCCCHHH RIARDLCTPFGIDVTIDTDIGAPIRDLKVEHSETVVDVLSRAARLRGVLVTTDAQGRVLI HHHHHHCCCCCCEEEEECCCCCCHHHEEECCHHHHHHHHHHHHHHCEEEEEECCCCEEEE TRAGKEKSHGAIVRGVNVISMESVGTDAERHSDYFCYGQGNVTHRSSLQTLEVGSTAADP EECCCCCCCCEEEECEEEEEECCCCCCHHHCCCEEEEECCCCCCCCCCEEEECCCCCCHH VKAFKKAIQQKAQAKDPEMRRYLPLVINANGNNDASDMQRLVDHTMRVRRGHAYGLKYVV HHHHHHHHHHHHHCCCCCHHCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEE EGWTWKGKPWEINTRVPIYDDIAGLDGDEWLICEVKQSVELKEGDVTELLVRPKEAYDTG ECEEECCCCEEECCCCCCHHHHCCCCCCCEEEEEECCCCCCCCCCHHHEEECCHHHCCCC PLKTKMKRRQGKGKRGKDGAVLEVKGDPS CHHHHHHHHHCCCCCCCCCCEEEECCCCC >Mature Secondary Structure ATKPEQFTRDDAKIYVTVNGRDYQGWLSSNIERSLETLSSRFTIPVSLIPGNPPNIKRQ CCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCEEEEEEEECCCCCCCCCC DAIKVRINDTLVVTGTVLAAEPFYKRDDCGLKVEGRSRSGDLVACSAIYQGGQWRNAKLD CEEEEEECCEEEEEEEEEECCCCCCCCCCCEEEECCCCCCCEEEEEEHHCCCCCCCCHHH RIARDLCTPFGIDVTIDTDIGAPIRDLKVEHSETVVDVLSRAARLRGVLVTTDAQGRVLI HHHHHHCCCCCCEEEEECCCCCCHHHEEECCHHHHHHHHHHHHHHCEEEEEECCCCEEEE TRAGKEKSHGAIVRGVNVISMESVGTDAERHSDYFCYGQGNVTHRSSLQTLEVGSTAADP EECCCCCCCCEEEECEEEEEECCCCCCHHHCCCEEEEECCCCCCCCCCEEEECCCCCCHH VKAFKKAIQQKAQAKDPEMRRYLPLVINANGNNDASDMQRLVDHTMRVRRGHAYGLKYVV HHHHHHHHHHHHHCCCCCHHCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEE EGWTWKGKPWEINTRVPIYDDIAGLDGDEWLICEVKQSVELKEGDVTELLVRPKEAYDTG ECEEECCCCEEECCCCCCHHHHCCCCCCCEEEEEECCCCCCCCCCHHHEEECCHHHCCCC PLKTKMKRRQGKGKRGKDGAVLEVKGDPS CHHHHHHHHHCCCCCCCCCCEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA