| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238025493
Identifier: 238025493
GI number: 238025493
Start: 2715758
End: 2718148
Strand: Direct
Name: 238025493
Synonym: bglu_2g21880
Alternate gene names: NA
Gene position: 2715758-2718148 (Clockwise)
Preceding gene: 238025492
Following gene: 238025494
Centisome position: 96.05
GC content: 61.69
Gene sequence:
>2391_bases ATGAGCAATATGGTGCTGCGGTACGTCATCACCCTGACAAGCGACCTGAAGCGCCGCGCTGCCGAGAACGCGCGTGCGCT CGAACAGGCCAGCCAGCGTCAGACCAAGGCGCTCACGGACGTAGATCGCGCTGCGCAGAAAACCGAGAAGACTTTGGAAC AGGTGAGCAGCAAGACGAACGCCGCGCGCCCGGAGGGCAGCGCGCGGCGCATGGCGGCGGCGCTGGCCAGCGTCGCGAAC GCGACGCAGCGCGCGACGACGGCACTGTCGCAAATGGGTGGCCGGTCGTCGCTAGATCGCATGAACGCGTATCTGGCGAG CGTTTCTCGGCGTATCGATGACGTTCGCCGCAACGCCGAGCGTGCAGCGCATGTCGTCGGTCGTATTGGGCAGACTGGCG CGGCTGTCGTCGGGGGAGCAGTCGCAGTCGGTACCGCAGCTGCTGCGACGCTTCAGCGACCGATGTCATTCGACGAGCGG CTGGCGCATCTTTCCAATTTTGCGTACGGCCAAAAAACTCCGGCACAGCGCATTTTGGAGATCGGCAATCTGGAGGACAC GATCAACGCTGCCGTTCGGTACGGTGGAGGGTCGCGCGATACTGCGCTTCAAGCGCTTGGCGCTGTCATGGCGTCGGGAT CTGTCGAAATCAACGATGCGAAATCAATGCTGCCCGATCTGCTGAAAGGTGCGACGGCCTGCGACGCGGATGTGACTGAA ATTGCGCAGGTTGAAGTGGCCGGCATGCGCAATTTCGGGCTGTCGAAAGACGATATGAACAAGGTGATTTCGAAGATGGT GGTTGCCGGGCATGAAGGAAGATTCAATATCAAGAACATGGCCCCTTACCTGCCCGACCTGATGGCATCGTCGAATGACA AGCTTGGTATGCGTGGTATGGGAGATTACGAGAAACTGCTGTCCTATGCACAGGCATCGGCCATCACATCAGGAACCGCT GATGCGGCAGGTATCGGCCTCAAAAATCTGATTCTGAAGATCAACAGCGACGATACGAAGAACGGCTTCAAGAAGATGGG ATACGACCTTCCGAAGTCGCTGGCTCGTGCTCGCGAACGCGGCTTCGACGGAATTATGGCTTTTGCCGATTTCGCGAATC AGATTGTCGGGAAGGACAAGAATTACGTCGAGCTGAGAAAGAAAGCGTCGAGCGAAACGGGTGACCAGCAAAGGGAAACC TATCGAGCGATGGCCGCCATTTTGCAAGGTTCTGCAATTGGCAAGATCATTCACGATCCGCAAGCGCTGATGGCACTTGT CGGCATCACGGCAAACCCGGACTCCCTGAAGAAAGTCCAGGAGCAGATCCACGCCGACAACGGCGAGGCAGTCCAGTCGA ATTTCCGCGTTGTGTCGAGCCGTGCAGCATTCAAGGCTCAGCAGATCGCTAACGAAACGGACATGGCGCGCAGTCATGTC TTCGAGCAGATTGACGGCCCCCTCAAGACGGTACTGGACGCTGTAACGCAATTGGCACGGGTAATGCCAGGTGCGACCAC AGCCGTTACCGCGTTTGCCCTGACGGCGGCGGTAGTTACGGCGGCAGGCGTTGGCGGCGTACCTGCGCGGTGTCTGCTCA GCCGCGGTCCTCGCGGTACTCCCGGTGTGCCGGGTGGTGCCAGTGGTTTGGGGGGCGTCGGCAGTGGCCCCATACCGGTC TACGTCGTGAACAAGATTCCCGGCTGGACCGCGCCGACGCCAGGCGGTGCTGCTGGTGGCGCTCCAGGTGCGGCTACCGG TGGCGCACGACGTGGGCTATTCGGCCGACTCGGCGGAGCCGCGCCGTGGCTCGTGACGGCAGGGCTCGCTGCATACGATC TGTTGCCCACGCTGCTGGACAGCAGCAAGACGCCGACCGAGAAGGCTAACGCCGCCGGCCGTACGGCTGCAGGTGTTGCC GGCGGCTGGGCTGGCGCCCAGGCCGGTATAGCGCTTGGCGCCTTCGGTGGACCGTTCGCACCTATCACGGTGCCGCTGGG CGGCATGCTCGGTGGTGCGGTGGGCTTTCTCGGCGCGCAATGGGCCGGTGACCAACTCACCAGTGTGATGTCCCGCCCGC CGTCGCAGCGTGTGAGTGAGACACGCGCCAGCGACGGATCAACCGCCCAGGTGCCGCAGGAACTACTGGACCGCATCAGC ATCCTTCGCACGCAGCCGGCCTATCTGATCAACCCGATGCTGCAGCCGTCAACCGCGCTTGCGATAATGGACCACATCCA GGCCGAGTCCCAGAAAGTCGAGGTCGGCAACGGCACGCTGAACGTCAACGTTGCCGTACGCGACGAGCGAATCATGACGA CCGCGACTGTGACGCAGCAGCCGTTCGCACTGCGCGTCGACGCAGGCTCAACCAACCCGGGAGGTTTTTAA
Upstream 100 bases:
>100_bases TGACTTCGGTGCGCAGCATGCCGCTGTCGCAACTGATGGCGCAGGCCGCTGAACTGGACCGCGCCCATAAGGCGCAACAG GAACAGACGAGGAAACGGCG
Downstream 100 bases:
>100_bases GCGATGGCACTGCTGGGAACAACCTGGCTAGACCAACTGCGCACCGCGTCATGGCGCGACGTGTCGTTCCAGGTCGACAC GATCGAGATGACGGACGGCG
Product: phage tail tape measure protein, TP901 family
Products: NA
Alternate protein names: Phage Tail Tape Measure Protein; Prophage; Phage Tail Length Determination Protein; Bacteriophage Tail Length Determination Protein; Tail Tape Measure Core Region
Number of amino acids: Translated: 796; Mature: 795
Protein sequence:
>796_residues MSNMVLRYVITLTSDLKRRAAENARALEQASQRQTKALTDVDRAAQKTEKTLEQVSSKTNAARPEGSARRMAAALASVAN ATQRATTALSQMGGRSSLDRMNAYLASVSRRIDDVRRNAERAAHVVGRIGQTGAAVVGGAVAVGTAAAATLQRPMSFDER LAHLSNFAYGQKTPAQRILEIGNLEDTINAAVRYGGGSRDTALQALGAVMASGSVEINDAKSMLPDLLKGATACDADVTE IAQVEVAGMRNFGLSKDDMNKVISKMVVAGHEGRFNIKNMAPYLPDLMASSNDKLGMRGMGDYEKLLSYAQASAITSGTA DAAGIGLKNLILKINSDDTKNGFKKMGYDLPKSLARARERGFDGIMAFADFANQIVGKDKNYVELRKKASSETGDQQRET YRAMAAILQGSAIGKIIHDPQALMALVGITANPDSLKKVQEQIHADNGEAVQSNFRVVSSRAAFKAQQIANETDMARSHV FEQIDGPLKTVLDAVTQLARVMPGATTAVTAFALTAAVVTAAGVGGVPARCLLSRGPRGTPGVPGGASGLGGVGSGPIPV YVVNKIPGWTAPTPGGAAGGAPGAATGGARRGLFGRLGGAAPWLVTAGLAAYDLLPTLLDSSKTPTEKANAAGRTAAGVA GGWAGAQAGIALGAFGGPFAPITVPLGGMLGGAVGFLGAQWAGDQLTSVMSRPPSQRVSETRASDGSTAQVPQELLDRIS ILRTQPAYLINPMLQPSTALAIMDHIQAESQKVEVGNGTLNVNVAVRDERIMTTATVTQQPFALRVDAGSTNPGGF
Sequences:
>Translated_796_residues MSNMVLRYVITLTSDLKRRAAENARALEQASQRQTKALTDVDRAAQKTEKTLEQVSSKTNAARPEGSARRMAAALASVAN ATQRATTALSQMGGRSSLDRMNAYLASVSRRIDDVRRNAERAAHVVGRIGQTGAAVVGGAVAVGTAAAATLQRPMSFDER LAHLSNFAYGQKTPAQRILEIGNLEDTINAAVRYGGGSRDTALQALGAVMASGSVEINDAKSMLPDLLKGATACDADVTE IAQVEVAGMRNFGLSKDDMNKVISKMVVAGHEGRFNIKNMAPYLPDLMASSNDKLGMRGMGDYEKLLSYAQASAITSGTA DAAGIGLKNLILKINSDDTKNGFKKMGYDLPKSLARARERGFDGIMAFADFANQIVGKDKNYVELRKKASSETGDQQRET YRAMAAILQGSAIGKIIHDPQALMALVGITANPDSLKKVQEQIHADNGEAVQSNFRVVSSRAAFKAQQIANETDMARSHV FEQIDGPLKTVLDAVTQLARVMPGATTAVTAFALTAAVVTAAGVGGVPARCLLSRGPRGTPGVPGGASGLGGVGSGPIPV YVVNKIPGWTAPTPGGAAGGAPGAATGGARRGLFGRLGGAAPWLVTAGLAAYDLLPTLLDSSKTPTEKANAAGRTAAGVA GGWAGAQAGIALGAFGGPFAPITVPLGGMLGGAVGFLGAQWAGDQLTSVMSRPPSQRVSETRASDGSTAQVPQELLDRIS ILRTQPAYLINPMLQPSTALAIMDHIQAESQKVEVGNGTLNVNVAVRDERIMTTATVTQQPFALRVDAGSTNPGGF >Mature_795_residues SNMVLRYVITLTSDLKRRAAENARALEQASQRQTKALTDVDRAAQKTEKTLEQVSSKTNAARPEGSARRMAAALASVANA TQRATTALSQMGGRSSLDRMNAYLASVSRRIDDVRRNAERAAHVVGRIGQTGAAVVGGAVAVGTAAAATLQRPMSFDERL AHLSNFAYGQKTPAQRILEIGNLEDTINAAVRYGGGSRDTALQALGAVMASGSVEINDAKSMLPDLLKGATACDADVTEI AQVEVAGMRNFGLSKDDMNKVISKMVVAGHEGRFNIKNMAPYLPDLMASSNDKLGMRGMGDYEKLLSYAQASAITSGTAD AAGIGLKNLILKINSDDTKNGFKKMGYDLPKSLARARERGFDGIMAFADFANQIVGKDKNYVELRKKASSETGDQQRETY RAMAAILQGSAIGKIIHDPQALMALVGITANPDSLKKVQEQIHADNGEAVQSNFRVVSSRAAFKAQQIANETDMARSHVF EQIDGPLKTVLDAVTQLARVMPGATTAVTAFALTAAVVTAAGVGGVPARCLLSRGPRGTPGVPGGASGLGGVGSGPIPVY VVNKIPGWTAPTPGGAAGGAPGAATGGARRGLFGRLGGAAPWLVTAGLAAYDLLPTLLDSSKTPTEKANAAGRTAAGVAG GWAGAQAGIALGAFGGPFAPITVPLGGMLGGAVGFLGAQWAGDQLTSVMSRPPSQRVSETRASDGSTAQVPQELLDRISI LRTQPAYLINPMLQPSTALAIMDHIQAESQKVEVGNGTLNVNVAVRDERIMTTATVTQQPFALRVDAGSTNPGGF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 82632; Mature: 82501
Theoretical pI: Translated: 10.15; Mature: 10.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNMVLRYVITLTSDLKRRAAENARALEQASQRQTKALTDVDRAAQKTEKTLEQVSSKTN CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC AARPEGSARRMAAALASVANATQRATTALSQMGGRSSLDRMNAYLASVSRRIDDVRRNAE CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH RAAHVVGRIGQTGAAVVGGAVAVGTAAAATLQRPMSFDERLAHLSNFAYGQKTPAQRILE HHHHHHHHCCCCCHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHH IGNLEDTINAAVRYGGGSRDTALQALGAVMASGSVEINDAKSMLPDLLKGATACDADVTE HCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEECHHHHHHHHHHCCCCCCCCHHHH IAQVEVAGMRNFGLSKDDMNKVISKMVVAGHEGRFNIKNMAPYLPDLMASSNDKLGMRGM HHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCEEHHHHCHHHHHHHHCCCCCCCCCCC GDYEKLLSYAQASAITSGTADAAGIGLKNLILKINSDDTKNGFKKMGYDLPKSLARARER CCHHHHHHHHHHHHHCCCCCCHHCCCHHHEEEEECCCCCHHHHHHHCCCHHHHHHHHHHC GFDGIMAFADFANQIVGKDKNYVELRKKASSETGDQQRETYRAMAAILQGSAIGKIIHDP CCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHCCH QALMALVGITANPDSLKKVQEQIHADNGEAVQSNFRVVSSRAAFKAQQIANETDMARSHV HHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH FEQIDGPLKTVLDAVTQLARVMPGATTAVTAFALTAAVVTAAGVGGVPARCLLSRGPRGT HHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCC PGVPGGASGLGGVGSGPIPVYVVNKIPGWTAPTPGGAAGGAPGAATGGARRGLFGRLGGA CCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHCHHHHCCCC APWLVTAGLAAYDLLPTLLDSSKTPTEKANAAGRTAAGVAGGWAGAQAGIALGAFGGPFA CHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCHHCCCCCCCHHHHCEEEECCCCCCC PITVPLGGMLGGAVGFLGAQWAGDQLTSVMSRPPSQRVSETRASDGSTAQVPQELLDRIS CCEECHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHH ILRTQPAYLINPMLQPSTALAIMDHIQAESQKVEVGNGTLNVNVAVRDERIMTTATVTQQ HHHCCCHHHHCCCCCCHHHHHHHHHHHHCCCEEEECCCEEEEEEEEECCEEEEEEEECCC PFALRVDAGSTNPGGF CEEEEEECCCCCCCCC >Mature Secondary Structure SNMVLRYVITLTSDLKRRAAENARALEQASQRQTKALTDVDRAAQKTEKTLEQVSSKTN CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC AARPEGSARRMAAALASVANATQRATTALSQMGGRSSLDRMNAYLASVSRRIDDVRRNAE CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH RAAHVVGRIGQTGAAVVGGAVAVGTAAAATLQRPMSFDERLAHLSNFAYGQKTPAQRILE HHHHHHHHCCCCCHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHH IGNLEDTINAAVRYGGGSRDTALQALGAVMASGSVEINDAKSMLPDLLKGATACDADVTE HCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEECHHHHHHHHHHCCCCCCCCHHHH IAQVEVAGMRNFGLSKDDMNKVISKMVVAGHEGRFNIKNMAPYLPDLMASSNDKLGMRGM HHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCEEHHHHCHHHHHHHHCCCCCCCCCCC GDYEKLLSYAQASAITSGTADAAGIGLKNLILKINSDDTKNGFKKMGYDLPKSLARARER CCHHHHHHHHHHHHHCCCCCCHHCCCHHHEEEEECCCCCHHHHHHHCCCHHHHHHHHHHC GFDGIMAFADFANQIVGKDKNYVELRKKASSETGDQQRETYRAMAAILQGSAIGKIIHDP CCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHCCH QALMALVGITANPDSLKKVQEQIHADNGEAVQSNFRVVSSRAAFKAQQIANETDMARSHV HHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH FEQIDGPLKTVLDAVTQLARVMPGATTAVTAFALTAAVVTAAGVGGVPARCLLSRGPRGT HHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCC PGVPGGASGLGGVGSGPIPVYVVNKIPGWTAPTPGGAAGGAPGAATGGARRGLFGRLGGA CCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHCHHHHCCCC APWLVTAGLAAYDLLPTLLDSSKTPTEKANAAGRTAAGVAGGWAGAQAGIALGAFGGPFA CHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCHHCCCCCCCHHHHCEEEECCCCCCC PITVPLGGMLGGAVGFLGAQWAGDQLTSVMSRPPSQRVSETRASDGSTAQVPQELLDRIS CCEECHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHH ILRTQPAYLINPMLQPSTALAIMDHIQAESQKVEVGNGTLNVNVAVRDERIMTTATVTQQ HHHCCCHHHHCCCCCCHHHHHHHHHHHHCCCEEEECCCEEEEEEEEECCEEEEEEEECCC PFALRVDAGSTNPGGF CEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA