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The map label for this gene is oprB [H]

Identifier: 238025445

GI number: 238025445

Start: 2651531

End: 2653000

Strand: Direct

Name: oprB [H]

Synonym: bglu_2g21350

Alternate gene names: 238025445

Gene position: 2651531-2653000 (Clockwise)

Preceding gene: 238025444

Following gene: 238025448

Centisome position: 93.78

GC content: 72.79

Gene sequence:

>1470_bases
ATGAAAACACTCGTCCGTCATCTCCAGTGCGCGTTACCGCCATGCCGGCTCGCGGCATCGCCGGCCGCGCTGCGCCGCGC
GGCCGCATCGGCCGCGCTCGTGTCGGCCTGCGCCGCCATGCAGGCCGCCGCCTGCGCGCAGGATGCGCCCGGCACGCCGC
CCCCGGCCGGCGGCGCCACGCCGGCCGACGGGCTGTGGCAGCGCGCGACGCTGTTAGGCGACCTCGGCGGCCTGCGCGGC
GCGCTCGGCAACCACGGCATCACGTTCACGCTGCAGGAGACCAGCGAATACCTGGGCAACCTCGCCGGCGGCACGCGCCG
GGTCGGCGCCTACGACGGCCTGACCCAGGCCGCGCTGAGCGTGGACACGAGCAAGCTGTTCGGGCTGGCCGGCGGCACCT
TCAACGTCAGCGCGCTGCAGATCCACGGCACCAACCTGAGCTCGCGCGCGCTGTCGGCCTTACAGAGCGCGAGCGGCATC
GAGGCGGAAGCGGGCACGCGGCTATGGGAGCTGTGGTACGGGCAATCGATCGCCGGCGGCGCGGCCGATGTCCGCCTCGG
GCAGCAGAGCGTCGATCAGGAGTTCATGGTCAGCCAGACCGCCAGCACCTTCATCAACGCGACGTTCGGCTGGCCGGTCC
TGCCGTCGGCCGATCTGCCGGGCGGCGGCCCGGCCTATCCGCTGTCGGCGCTCGGCGTGCGCGTGAAGGCCCAGCCGACC
CGCGCGCTGACGCTGCTGGCCGGCGTGTTCGACGGCTATCCCGGCGGACTCGGGCAGGCCGACGCGCAGCGCGCGAACCC
GCACGGCACGAACTTCAACCTGCACGACGGCGCGCTCTGGATCGGCGAGCTGCAATACGCGCTCAACGGCCAGCCGGCGG
GCGCGCCCGATGCGCAGCCCGATGGCCTGCCGGGCACCTACAAGCTCGGCGTCTGGTATCTGAGCGGCGCGTTCGCCGAT
CCGCACGTCGACACGAGCGGCGGCTCGCTGGCGGCGCCGGGCTCGAACGGCATCGCCCGCACGCATCGCGGCGACTACGG
CGCCTATGCGATCGCCGATCAGATGGTGTGGCGCTCGGCGGCCAACCCGTCGCGCGCGCTCGGCGTGTTCGTGCGCGTGA
TGGGCGCGCCGGACGACCGCAACCCGATCGACTTCTCCGCGCAGGCCGGCGTCTCGCTGAAGGCGCCGTTCGCGGGACGC
GACAACGACACGGCCGGCATCGCGCTCGGCTACACCAATGCGACGCTGAACGTGGACGGCGTGACGAGCGATCTGGCACG
ACCGCGCCGCGTGAATGAAACCGTCTTCGAGGCGACCTATCAGTATCAGGTGGCGCCGTGGTGGACGCTGCAGGGCGACC
TGCAGTACATCGTGCGGCCGGGCGGCGGGTACGACGCCCCGGCGGGCGGCACGGTCAGGGCGATCGGCAACGCGTTCGTG
GCCGGCGTGCGGACCGTGGTCAGCTTCTGA

Upstream 100 bases:

>100_bases
CGCTCGCCGTCCCGAATCCGTCACGACAGCCGCCGACACTAGCGGGTTGAGCACCGCTGCTGTCATTCGTCAAACAAAAA
CCTGCGTTCCCCTACCAGCC

Downstream 100 bases:

>100_bases
GCGAGCCGCGCGGCGGCGCTTACGCGTCGAACCCGCCGCCGCGGCCGAACACGCGCGCGGTAAAGCGCTCGGCGATCCGG
CGATGCGCGGCGCCATCGGG

Product: OprB family carbohydrate porin

Products: NA

Alternate protein names: Glucose porin; Outer membrane protein D1 [H]

Number of amino acids: Translated: 489; Mature: 489

Protein sequence:

>489_residues
MKTLVRHLQCALPPCRLAASPAALRRAAASAALVSACAAMQAAACAQDAPGTPPPAGGATPADGLWQRATLLGDLGGLRG
ALGNHGITFTLQETSEYLGNLAGGTRRVGAYDGLTQAALSVDTSKLFGLAGGTFNVSALQIHGTNLSSRALSALQSASGI
EAEAGTRLWELWYGQSIAGGAADVRLGQQSVDQEFMVSQTASTFINATFGWPVLPSADLPGGGPAYPLSALGVRVKAQPT
RALTLLAGVFDGYPGGLGQADAQRANPHGTNFNLHDGALWIGELQYALNGQPAGAPDAQPDGLPGTYKLGVWYLSGAFAD
PHVDTSGGSLAAPGSNGIARTHRGDYGAYAIADQMVWRSAANPSRALGVFVRVMGAPDDRNPIDFSAQAGVSLKAPFAGR
DNDTAGIALGYTNATLNVDGVTSDLARPRRVNETVFEATYQYQVAPWWTLQGDLQYIVRPGGGYDAPAGGTVRAIGNAFV
AGVRTVVSF

Sequences:

>Translated_489_residues
MKTLVRHLQCALPPCRLAASPAALRRAAASAALVSACAAMQAAACAQDAPGTPPPAGGATPADGLWQRATLLGDLGGLRG
ALGNHGITFTLQETSEYLGNLAGGTRRVGAYDGLTQAALSVDTSKLFGLAGGTFNVSALQIHGTNLSSRALSALQSASGI
EAEAGTRLWELWYGQSIAGGAADVRLGQQSVDQEFMVSQTASTFINATFGWPVLPSADLPGGGPAYPLSALGVRVKAQPT
RALTLLAGVFDGYPGGLGQADAQRANPHGTNFNLHDGALWIGELQYALNGQPAGAPDAQPDGLPGTYKLGVWYLSGAFAD
PHVDTSGGSLAAPGSNGIARTHRGDYGAYAIADQMVWRSAANPSRALGVFVRVMGAPDDRNPIDFSAQAGVSLKAPFAGR
DNDTAGIALGYTNATLNVDGVTSDLARPRRVNETVFEATYQYQVAPWWTLQGDLQYIVRPGGGYDAPAGGTVRAIGNAFV
AGVRTVVSF
>Mature_489_residues
MKTLVRHLQCALPPCRLAASPAALRRAAASAALVSACAAMQAAACAQDAPGTPPPAGGATPADGLWQRATLLGDLGGLRG
ALGNHGITFTLQETSEYLGNLAGGTRRVGAYDGLTQAALSVDTSKLFGLAGGTFNVSALQIHGTNLSSRALSALQSASGI
EAEAGTRLWELWYGQSIAGGAADVRLGQQSVDQEFMVSQTASTFINATFGWPVLPSADLPGGGPAYPLSALGVRVKAQPT
RALTLLAGVFDGYPGGLGQADAQRANPHGTNFNLHDGALWIGELQYALNGQPAGAPDAQPDGLPGTYKLGVWYLSGAFAD
PHVDTSGGSLAAPGSNGIARTHRGDYGAYAIADQMVWRSAANPSRALGVFVRVMGAPDDRNPIDFSAQAGVSLKAPFAGR
DNDTAGIALGYTNATLNVDGVTSDLARPRRVNETVFEATYQYQVAPWWTLQGDLQYIVRPGGGYDAPAGGTVRAIGNAFV
AGVRTVVSF

Specific function: Substrate-selective channel for a variety of different sugars. Could potentially facilitate the diffusion of diverse compounds, dependent on the presence of a hydroxyl group, but is presumably restricted to carbohydrates. Involved in the transport of gluc

COG id: COG3659

COG function: function code M; Carbohydrate-selective porin

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the oprB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007049 [H]

Pfam domain/function: PF04966 OprB [H]

EC number: NA

Molecular weight: Translated: 50291; Mature: 50291

Theoretical pI: Translated: 6.63; Mature: 6.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTLVRHLQCALPPCRLAASPAALRRAAASAALVSACAAMQAAACAQDAPGTPPPAGGAT
CHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PADGLWQRATLLGDLGGLRGALGNHGITFTLQETSEYLGNLAGGTRRVGAYDGLTQAALS
CCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHCCCCEECCCCCCHHHHHHH
VDTSKLFGLAGGTFNVSALQIHGTNLSSRALSALQSASGIEAEAGTRLWELWYGQSIAGG
CCHHHHHEECCCCEEEEEEEEECCCCHHHHHHHHHHHCCCCCHHCCEEEEHHCCCCCCCC
AADVRLGQQSVDQEFMVSQTASTFINATFGWPVLPSADLPGGGPAYPLSALGVRVKAQPT
CHHEECCHHHHCHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCHHHHCEEEECCCH
RALTLLAGVFDGYPGGLGQADAQRANPHGTNFNLHDGALWIGELQYALNGQPAGAPDAQP
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEECCCCEEEEEEEEEEECCCCCCCCCCCC
DGLPGTYKLGVWYLSGAFADPHVDTSGGSLAAPGSNGIARTHRGDYGAYAIADQMVWRSA
CCCCCEEEEEEEEEECCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHC
ANPSRALGVFVRVMGAPDDRNPIDFSAQAGVSLKAPFAGRDNDTAGIALGYTNATLNVDG
CCHHHHHEEHHHEECCCCCCCCCCCCCCCCCEEECCCCCCCCCCCEEEEEECCEEEEECC
VTSDLARPRRVNETVFEATYQYQVAPWWTLQGDLQYIVRPGGGYDAPAGGTVRAIGNAFV
CHHHHCCCCHHHHHHHHHEEEEEECEEEEECCCEEEEEECCCCCCCCCCCCHHHHHHHHH
AGVRTVVSF
HHHHHHHCC
>Mature Secondary Structure
MKTLVRHLQCALPPCRLAASPAALRRAAASAALVSACAAMQAAACAQDAPGTPPPAGGAT
CHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PADGLWQRATLLGDLGGLRGALGNHGITFTLQETSEYLGNLAGGTRRVGAYDGLTQAALS
CCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHCCCCEECCCCCCHHHHHHH
VDTSKLFGLAGGTFNVSALQIHGTNLSSRALSALQSASGIEAEAGTRLWELWYGQSIAGG
CCHHHHHEECCCCEEEEEEEEECCCCHHHHHHHHHHHCCCCCHHCCEEEEHHCCCCCCCC
AADVRLGQQSVDQEFMVSQTASTFINATFGWPVLPSADLPGGGPAYPLSALGVRVKAQPT
CHHEECCHHHHCHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCHHHHCEEEECCCH
RALTLLAGVFDGYPGGLGQADAQRANPHGTNFNLHDGALWIGELQYALNGQPAGAPDAQP
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEECCCCEEEEEEEEEEECCCCCCCCCCCC
DGLPGTYKLGVWYLSGAFADPHVDTSGGSLAAPGSNGIARTHRGDYGAYAIADQMVWRSA
CCCCCEEEEEEEEEECCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHC
ANPSRALGVFVRVMGAPDDRNPIDFSAQAGVSLKAPFAGRDNDTAGIALGYTNATLNVDG
CCHHHHHEEHHHEECCCCCCCCCCCCCCCCCEEECCCCCCCCCCCEEEEEECCEEEEECC
VTSDLARPRRVNETVFEATYQYQVAPWWTLQGDLQYIVRPGGGYDAPAGGTVRAIGNAFV
CHHHHCCCCHHHHHHHHHEEEEEECEEEEECCCEEEEEECCCCCCCCCCCCHHHHHHHHH
AGVRTVVSF
HHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8125108; 10984043; 2450582; 8132494; 7768797 [H]