| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238025326
Identifier: 238025326
GI number: 238025326
Start: 2487156
End: 2488145
Strand: Direct
Name: 238025326
Synonym: bglu_2g20000
Alternate gene names: NA
Gene position: 2487156-2488145 (Clockwise)
Preceding gene: 238025325
Following gene: 238025327
Centisome position: 87.97
GC content: 69.6
Gene sequence:
>990_bases ATGCGCTCGCTGCCGCTGCAGGGTCTGCGCCTGCCGCTCATCGCGTCACCCATGTTGATCGCCAGCTACCCCGAGATGGT GCTGGCCCAATGCAAGAGCGGGATCGTCGGCGCCTTTCCCGCCCTCAATGCTCGACCGAGCGCGCAGCTCGGCGACTGGA TCGATCGAATCGACGAGGCGCTGGCCGCCCATCGCGCCGCCCATCCGGACGCGTGCGTGGGGCCGTATGCCGTCAATCAC ATCTGCCACCAGAGCAATACGCGGCTCGAGGCCGACCTGCGGATCTGCATCGAGCGGCGCACGCCGATCCTGATCACGAG CCTGCGGGCGCCGTCGCGCGAGATCGTCGATGCCGTGCACGCCTACGGCGGCGTCGTGCTGCATGACGTCACTACCGTAC GACACGCCGAGAAAGCGCTCGAAGCCGGCGTCGACGGCCTGATCCTGGTCGCGGCCGGCGCGGGCGGCCATGCCGGCACC CTGTCTCCGTTCGCGCTGGTCTCGGAGGTTCGACGCTTTCACGACGGCTTCGTCGCGCTGTCAGGTGCGATCGCCACGGG CGCGGCGATCGCCGCGGCGCTTGCCCTGGGCGCCGACTGCGCCTATATGGGCACGCGCTTCCTGGCGTCCCACGAAGCCA ACGTCGCGCCGCGCTACAAGGACACGATCGTCGCGGCCACCGCCGCCGATATCGTCTACACCGACGCCTTCACCGGCGTA CATGGCAACTATCTGCGCCAAAGCATCGAGGCCGCGGGCCTGGACGTCCGCAACCTGCCCCGCGCCGAGCACGCACGCCT CGATTTCTCGCCCGAGTCCGGCGCCAGGCAGTGGCGCGATATCTGGGGCGCCGGCCAGGGTGTCGGTTCGATGGACGCGG TGCTGAGCGTCGAGCAGATCGTCGCCCAACTCGCGGCCGAGTATGCCGTCGCGCTCGAACGCGTTCATGAAGCGTCCGAG CGCATCGGCCGGCCGGCCCTCGCGCGCTGA
Upstream 100 bases:
>100_bases CACGCTGCGCGGTCGGCCGCGACAGTTTTCACGAGCGGCTTGCCGAACGCCGTGACAGCGCGCCGGTCGCACCATGAGCG CCGCGGGAGGAGGCACGCCG
Downstream 100 bases:
>100_bases GCGCACACCGCCCTTCCCTTCGCTACCTTCACGGTCCCGTCATGCCTCTTTCCGACACCGCCTCGCCCGCTCACGACCCG GTCGCCCTGCAGCGCGCGCA
Product: 2-nitropropane dioxygenase NPD
Products: NA
Alternate protein names: Nitroalkane oxidase [H]
Number of amino acids: Translated: 329; Mature: 329
Protein sequence:
>329_residues MRSLPLQGLRLPLIASPMLIASYPEMVLAQCKSGIVGAFPALNARPSAQLGDWIDRIDEALAAHRAAHPDACVGPYAVNH ICHQSNTRLEADLRICIERRTPILITSLRAPSREIVDAVHAYGGVVLHDVTTVRHAEKALEAGVDGLILVAAGAGGHAGT LSPFALVSEVRRFHDGFVALSGAIATGAAIAAALALGADCAYMGTRFLASHEANVAPRYKDTIVAATAADIVYTDAFTGV HGNYLRQSIEAAGLDVRNLPRAEHARLDFSPESGARQWRDIWGAGQGVGSMDAVLSVEQIVAQLAAEYAVALERVHEASE RIGRPALAR
Sequences:
>Translated_329_residues MRSLPLQGLRLPLIASPMLIASYPEMVLAQCKSGIVGAFPALNARPSAQLGDWIDRIDEALAAHRAAHPDACVGPYAVNH ICHQSNTRLEADLRICIERRTPILITSLRAPSREIVDAVHAYGGVVLHDVTTVRHAEKALEAGVDGLILVAAGAGGHAGT LSPFALVSEVRRFHDGFVALSGAIATGAAIAAALALGADCAYMGTRFLASHEANVAPRYKDTIVAATAADIVYTDAFTGV HGNYLRQSIEAAGLDVRNLPRAEHARLDFSPESGARQWRDIWGAGQGVGSMDAVLSVEQIVAQLAAEYAVALERVHEASE RIGRPALAR >Mature_329_residues MRSLPLQGLRLPLIASPMLIASYPEMVLAQCKSGIVGAFPALNARPSAQLGDWIDRIDEALAAHRAAHPDACVGPYAVNH ICHQSNTRLEADLRICIERRTPILITSLRAPSREIVDAVHAYGGVVLHDVTTVRHAEKALEAGVDGLILVAAGAGGHAGT LSPFALVSEVRRFHDGFVALSGAIATGAAIAAALALGADCAYMGTRFLASHEANVAPRYKDTIVAATAADIVYTDAFTGV HGNYLRQSIEAAGLDVRNLPRAEHARLDFSPESGARQWRDIWGAGQGVGSMDAVLSVEQIVAQLAAEYAVALERVHEASE RIGRPALAR
Specific function: Catalyzes the oxidation of alkyl nitronates to produce the corresponding carbonyl compounds and nitrites [H]
COG id: COG2070
COG function: function code R; Dioxygenases related to 2-nitropropane dioxygenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nitronate monooxygenase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004136 - InterPro: IPR013785 [H]
Pfam domain/function: PF03060 NPD [H]
EC number: =1.13.12.16 [H]
Molecular weight: Translated: 34806; Mature: 34806
Theoretical pI: Translated: 6.70; Mature: 6.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSLPLQGLRLPLIASPMLIASYPEMVLAQCKSGIVGAFPALNARPSAQLGDWIDRIDEA CCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCHHHHHHHHHHHH LAAHRAAHPDACVGPYAVNHICHQSNTRLEADLRICIERRTPILITSLRAPSREIVDAVH HHHHHCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEEECCCCHHHHHHHHH AYGGVVLHDVTTVRHAEKALEAGVDGLILVAAGAGGHAGTLSPFALVSEVRRFHDGFVAL HHCCEEEHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCHHHH SGAIATGAAIAAALALGADCAYMGTRFLASHEANVAPRYKDTIVAATAADIVYTDAFTGV HHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHEECCCCCC HGNYLRQSIEAAGLDVRNLPRAEHARLDFSPESGARQWRDIWGAGQGVGSMDAVLSVEQI CHHHHHHHHHHHCCCHHCCCCCHHCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHH VAQLAAEYAVALERVHEASERIGRPALAR HHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MRSLPLQGLRLPLIASPMLIASYPEMVLAQCKSGIVGAFPALNARPSAQLGDWIDRIDEA CCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCHHHHHHHHHHHH LAAHRAAHPDACVGPYAVNHICHQSNTRLEADLRICIERRTPILITSLRAPSREIVDAVH HHHHHCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEEECCCCHHHHHHHHH AYGGVVLHDVTTVRHAEKALEAGVDGLILVAAGAGGHAGTLSPFALVSEVRRFHDGFVAL HHCCEEEHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCHHHH SGAIATGAAIAAALALGADCAYMGTRFLASHEANVAPRYKDTIVAATAADIVYTDAFTGV HHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHEECCCCCC HGNYLRQSIEAAGLDVRNLPRAEHARLDFSPESGARQWRDIWGAGQGVGSMDAVLSVEQI CHHHHHHHHHHHCCCHHCCCCCHHCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHH VAQLAAEYAVALERVHEASERIGRPALAR HHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA