Definition Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence.
Accession NC_012721
Length 2,827,333

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The map label for this gene is 238025325

Identifier: 238025325

GI number: 238025325

Start: 2486728

End: 2487132

Strand: Direct

Name: 238025325

Synonym: bglu_2g19990

Alternate gene names: NA

Gene position: 2486728-2487132 (Clockwise)

Preceding gene: 238025324

Following gene: 238025326

Centisome position: 87.95

GC content: 64.94

Gene sequence:

>405_bases
GTGTCCATCCAGCCCGGCCTTTGTGCCCGCGCCACGCATCGCGTCGATACGATCTCGCTTGCCGATCAGTGGGGCGGCGA
AGCGCACGCGCTGGCCAGCCCGATCATGATCATCTTCATCGAGCAGACCTGCATGCAGGCAACGGACCACCTGCTCGGCG
CCGACCTGATGACGGTCGGCTATCACTTCGAGATCAAGCATCTCGCGCCCACGCCGCCCGACTGGGAGGTCACGGTCGAC
GCCGAGCTGATCTCGGTGGATGGTCGCATGATGACCTACAAGGTATCGGTTAGCGATGCGGCTGGCGTAGTCGGCGAAGG
CACCCATACACGCTGCGCGGTCGGCCGCGACAGTTTTCACGAGCGGCTTGCCGAACGCCGTGACAGCGCGCCGGTCGCAC
CATGA

Upstream 100 bases:

>100_bases
CGCACGCAACATCTTCAGCCAGTTGCAGCGCCGCGCCAGCGCCGCGCACAAGCAAGCCGCCTGAGCGCTCATTTTCTCTC
TCGTCCCGAAGGAGTCTGCC

Downstream 100 bases:

>100_bases
GCGCCGCGGGAGGAGGCACGCCGATGCGCTCGCTGCCGCTGCAGGGTCTGCGCCTGCCGCTCATCGCGTCACCCATGTTG
ATCGCCAGCTACCCCGAGAT

Product: thioesterase family protein

Products: NA

Alternate protein names: Thioesterase Superfamily Protein; Thioesterase Superfamily; Thioesterase; Thioesterase/Thiol Ester Dehydrase-Isomerase

Number of amino acids: Translated: 134; Mature: 133

Protein sequence:

>134_residues
MSIQPGLCARATHRVDTISLADQWGGEAHALASPIMIIFIEQTCMQATDHLLGADLMTVGYHFEIKHLAPTPPDWEVTVD
AELISVDGRMMTYKVSVSDAAGVVGEGTHTRCAVGRDSFHERLAERRDSAPVAP

Sequences:

>Translated_134_residues
MSIQPGLCARATHRVDTISLADQWGGEAHALASPIMIIFIEQTCMQATDHLLGADLMTVGYHFEIKHLAPTPPDWEVTVD
AELISVDGRMMTYKVSVSDAAGVVGEGTHTRCAVGRDSFHERLAERRDSAPVAP
>Mature_133_residues
SIQPGLCARATHRVDTISLADQWGGEAHALASPIMIIFIEQTCMQATDHLLGADLMTVGYHFEIKHLAPTPPDWEVTVDA
ELISVDGRMMTYKVSVSDAAGVVGEGTHTRCAVGRDSFHERLAERRDSAPVAP

Specific function: Unknown

COG id: COG5496

COG function: function code R; Predicted thioesterase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14527; Mature: 14395

Theoretical pI: Translated: 5.13; Mature: 5.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIQPGLCARATHRVDTISLADQWGGEAHALASPIMIIFIEQTCMQATDHLLGADLMTVG
CCCCCCCCCHHHCCCEEEEEHHHCCCCCHHHHCCEEEEEEHHHHHHHHHHHHCCCEEEEE
YHFEIKHLAPTPPDWEVTVDAELISVDGRMMTYKVSVSDAAGVVGEGTHTRCAVGRDSFH
EEEEEEECCCCCCCCEEEEEEEEEEECCEEEEEEEECCCCCCCCCCCCCCEEEECHHHHH
ERLAERRDSAPVAP
HHHHHHCCCCCCCC
>Mature Secondary Structure 
SIQPGLCARATHRVDTISLADQWGGEAHALASPIMIIFIEQTCMQATDHLLGADLMTVG
CCCCCCCCHHHCCCEEEEEHHHCCCCCHHHHCCEEEEEEHHHHHHHHHHHHCCCEEEEE
YHFEIKHLAPTPPDWEVTVDAELISVDGRMMTYKVSVSDAAGVVGEGTHTRCAVGRDSFH
EEEEEEECCCCCCCCEEEEEEEEEEECCEEEEEEEECCCCCCCCCCCCCCEEEECHHHHH
ERLAERRDSAPVAP
HHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA