| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238025217
Identifier: 238025217
GI number: 238025217
Start: 2354875
End: 2355690
Strand: Direct
Name: 238025217
Synonym: bglu_2g18880
Alternate gene names: NA
Gene position: 2354875-2355690 (Clockwise)
Preceding gene: 238025216
Following gene: 238025218
Centisome position: 83.29
GC content: 72.92
Gene sequence:
>816_bases ATGCCCATCGCCGCCACCGTCGCGCTCGCCTTCGTGGCCACCAGCGCGGCATTCACAGCCGTCTGGCTTCACCAGTTGCG CTCGCGCAATGCCGGAATGATCGATCCCGTCTGGGCCGCCATGCTCGGCGCGGTGGCCGTCTACGTGGCCGTGGCCGGCA CCGGCGCGCCGGCCAGCCGCGCGTTCGTGGCGCTCGCGGGCGGCCTGTGGGGCTTGCGCCTGGCCGTGCATCTGCTGCGG CGCAACGCGGGCCACGCCGAGGACGCGCGCTATCGCGCGCTGCGCGAACAATGGGGCGCGGCCGCGCCCGCGCGCATGTT CGGCTTCTTCCAACTGCAGGCGGTGGTGTCGATGCTGCTCGCGATCGCCTTCCTGGTGCCGGCCTATCGCCCCGAGACGC CGTCGCCGGCGGCATTCGCCGCGGCCGTCGCGATCTGGCTCGCGGCGGTGGCGGGCGAAGCCGCGGCCGACCGCCAGCTG CGCCGCTTCGCGGCCGATCCGGCCCATCGCGGCCAGGTGTGCCGCGTCGGCTGGTGGCGCTATTCCCGGCACCCGAACTA CTTCTTCGAATGCCTGCACTGGCTGGCCTACACGGCGCTCGCGATCGGACTGCCGTGGGGCTGGCTCACGCTCGCGCCGC CGTGCCTGATGGCCTGGCTGCTGCTGCGCGTGTCCGGCATCCCGATGCTCGAGGCGCACCTGCAACGCTCGCGAGCCGGC TATCGCGACTATATCCGCACGACGAGCGCGCTCATCCCGTGGCCGCCGCGCGCGGCCGACCATCACGACCCACAGGAACG GAGCCCACGATCATGA
Upstream 100 bases:
>100_bases ACCCGAAGCGAACCGCGCGCCACGCACGCTGATGTTTTGCACGCTGCATCCGGGCCGGCCTGCGCGCCGTATCTCCCCGT TTTCACCTGCGGGAGTTCGC
Downstream 100 bases:
>100_bases CAGCGACCACTCTCGATTCGAAATCCGCCGCGGACCGCGACAGCTGGCTGATCCGCTACTGCGAGCGCGGCCGCGTGTCC GATTCGGTGATCCGCGGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 271; Mature: 270
Protein sequence:
>271_residues MPIAATVALAFVATSAAFTAVWLHQLRSRNAGMIDPVWAAMLGAVAVYVAVAGTGAPASRAFVALAGGLWGLRLAVHLLR RNAGHAEDARYRALREQWGAAAPARMFGFFQLQAVVSMLLAIAFLVPAYRPETPSPAAFAAAVAIWLAAVAGEAAADRQL RRFAADPAHRGQVCRVGWWRYSRHPNYFFECLHWLAYTALAIGLPWGWLTLAPPCLMAWLLLRVSGIPMLEAHLQRSRAG YRDYIRTTSALIPWPPRAADHHDPQERSPRS
Sequences:
>Translated_271_residues MPIAATVALAFVATSAAFTAVWLHQLRSRNAGMIDPVWAAMLGAVAVYVAVAGTGAPASRAFVALAGGLWGLRLAVHLLR RNAGHAEDARYRALREQWGAAAPARMFGFFQLQAVVSMLLAIAFLVPAYRPETPSPAAFAAAVAIWLAAVAGEAAADRQL RRFAADPAHRGQVCRVGWWRYSRHPNYFFECLHWLAYTALAIGLPWGWLTLAPPCLMAWLLLRVSGIPMLEAHLQRSRAG YRDYIRTTSALIPWPPRAADHHDPQERSPRS >Mature_270_residues PIAATVALAFVATSAAFTAVWLHQLRSRNAGMIDPVWAAMLGAVAVYVAVAGTGAPASRAFVALAGGLWGLRLAVHLLRR NAGHAEDARYRALREQWGAAAPARMFGFFQLQAVVSMLLAIAFLVPAYRPETPSPAAFAAAVAIWLAAVAGEAAADRQLR RFAADPAHRGQVCRVGWWRYSRHPNYFFECLHWLAYTALAIGLPWGWLTLAPPCLMAWLLLRVSGIPMLEAHLQRSRAGY RDYIRTTSALIPWPPRAADHHDPQERSPRS
Specific function: Unknown
COG id: COG3752
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Drosophila melanogaster, GI281365853, Length=205, Percent_Identity=30.2439024390244, Blast_Score=90, Evalue=1e-18, Organism=Drosophila melanogaster, GI28574404, Length=205, Percent_Identity=30.2439024390244, Blast_Score=90, Evalue=1e-18, Organism=Drosophila melanogaster, GI21355723, Length=205, Percent_Identity=30.2439024390244, Blast_Score=90, Evalue=1e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29667; Mature: 29536
Theoretical pI: Translated: 11.03; Mature: 11.03
Prosite motif: PS50244 S5A_REDUCTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIAATVALAFVATSAAFTAVWLHQLRSRNAGMIDPVWAAMLGAVAVYVAVAGTGAPASR CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHH AFVALAGGLWGLRLAVHLLRRNAGHAEDARYRALREQWGAAAPARMFGFFQLQAVVSMLL HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH AIAFLVPAYRPETPSPAAFAAAVAIWLAAVAGEAAADRQLRRFAADPAHRGQVCRVGWWR HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCEEEEEHHH YSRHPNYFFECLHWLAYTALAIGLPWGWLTLAPPCLMAWLLLRVSGIPMLEAHLQRSRAG HCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHCHHHHHHHHHHHHCCCHHHHHHHHHHHHH YRDYIRTTSALIPWPPRAADHHDPQERSPRS HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure PIAATVALAFVATSAAFTAVWLHQLRSRNAGMIDPVWAAMLGAVAVYVAVAGTGAPASR CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHH AFVALAGGLWGLRLAVHLLRRNAGHAEDARYRALREQWGAAAPARMFGFFQLQAVVSMLL HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH AIAFLVPAYRPETPSPAAFAAAVAIWLAAVAGEAAADRQLRRFAADPAHRGQVCRVGWWR HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCEEEEEHHH YSRHPNYFFECLHWLAYTALAIGLPWGWLTLAPPCLMAWLLLRVSGIPMLEAHLQRSRAG HCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHCHHHHHHHHHHHHCCCHHHHHHHHHHHHH YRDYIRTTSALIPWPPRAADHHDPQERSPRS HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA