| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238025216
Identifier: 238025216
GI number: 238025216
Start: 2352565
End: 2353320
Strand: Direct
Name: 238025216
Synonym: bglu_2g18870
Alternate gene names: NA
Gene position: 2352565-2353320 (Clockwise)
Preceding gene: 238025215
Following gene: 238025217
Centisome position: 83.21
GC content: 75.93
Gene sequence:
>756_bases ATGAACACGCCCGCCCATTCCGATCCCGAGCTGCGCTGCGCCGAATACGCGCTCGGCGTGCTCGACGCCGACGCGCGCCG CGCGCTCGAACGCGAGGCCGCGGCCGACCCCTCGCTCGCGGCGACGCTCGCGCGCTGGCAGGCGCGCTTCGCGCCGCTGG CCGAGGACGTGCCGCCGATCGCGCCGCCTGCGCGCGTCTGGACCCGCATCCAGCGCGATCTCGGCTTCCTGCCGGCTCGC GGCAAGGCCGCCGGAGGCGAGCGCGGCGCGGCCGGCTGGTGGAACCATCTCGGCTTCTGGCGCTGGCTCGGCATCGGCGC GAGCCTCGCCACCGTCGCGCTGGTGGCCGTGACGCTGACCACCGCGCGCCACGACGTTCCCGCGCCGGGCGCATCGACGG CGGCCCGGCCGGGCGCCGGCTACATGGTCGCCACCATCGCGCGTGCGGACGGCGTCGCGCACTGGACGGCCACGGTCGAC CTGCGGCGCGCGCGGATGGTGTTGGTGCCGGCCGACAAGCCGGCCATCGCCGCGAACCGCTCGACCGAGCTCTGGCTGAT TCCGCCGAACGCGAAACCGATTGCGCTCGGCGTGTTCGCGGCCGATACGCCGGCCGCGATGGCGTTGCCGCCTGCAGTCG TCGCTCAGCTCAGCGCACGCGCGGTGCTGGCGGTGTCGGTCGAACCGGTGGGCGGCTCGCCAACCGGCGAGCCGACCGGG CCGGTGATCGCCTCGGGGGCGATGCACGAGGCCTGA
Upstream 100 bases:
>100_bases CGACCTACGCGGAACTGGCCGAGCGGCTCGACGTGCCGCTCGGCACCATGAAGAGCTGGATCCGGCGCAGCCTGATGCAG TTGAAGCTGTGCCTCGAACG
Downstream 100 bases:
>100_bases CGGGGCACGAAGGGCGCTCGCCGGCCACGGCGCCCCCGCCTCGGCCCAGCACCGAGCGGCCGCGCACCGGTGCCGGATCG CAGGGCAGGAGACGGTTACA
Product: Anti-sigma-K factor RskA
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 251; Mature: 251
Protein sequence:
>251_residues MNTPAHSDPELRCAEYALGVLDADARRALEREAAADPSLAATLARWQARFAPLAEDVPPIAPPARVWTRIQRDLGFLPAR GKAAGGERGAAGWWNHLGFWRWLGIGASLATVALVAVTLTTARHDVPAPGASTAARPGAGYMVATIARADGVAHWTATVD LRRARMVLVPADKPAIAANRSTELWLIPPNAKPIALGVFAADTPAAMALPPAVVAQLSARAVLAVSVEPVGGSPTGEPTG PVIASGAMHEA
Sequences:
>Translated_251_residues MNTPAHSDPELRCAEYALGVLDADARRALEREAAADPSLAATLARWQARFAPLAEDVPPIAPPARVWTRIQRDLGFLPAR GKAAGGERGAAGWWNHLGFWRWLGIGASLATVALVAVTLTTARHDVPAPGASTAARPGAGYMVATIARADGVAHWTATVD LRRARMVLVPADKPAIAANRSTELWLIPPNAKPIALGVFAADTPAAMALPPAVVAQLSARAVLAVSVEPVGGSPTGEPTG PVIASGAMHEA >Mature_251_residues MNTPAHSDPELRCAEYALGVLDADARRALEREAAADPSLAATLARWQARFAPLAEDVPPIAPPARVWTRIQRDLGFLPAR GKAAGGERGAAGWWNHLGFWRWLGIGASLATVALVAVTLTTARHDVPAPGASTAARPGAGYMVATIARADGVAHWTATVD LRRARMVLVPADKPAIAANRSTELWLIPPNAKPIALGVFAADTPAAMALPPAVVAQLSARAVLAVSVEPVGGSPTGEPTG PVIASGAMHEA
Specific function: Unknown
COG id: COG5343
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25975; Mature: 25975
Theoretical pI: Translated: 9.25; Mature: 9.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTPAHSDPELRCAEYALGVLDADARRALEREAAADPSLAATLARWQARFAPLAEDVPPI CCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHCCCCC APPARVWTRIQRDLGFLPARGKAAGGERGAAGWWNHLGFWRWLGIGASLATVALVAVTLT CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHH TARHDVPAPGASTAARPGAGYMVATIARADGVAHWTATVDLRRARMVLVPADKPAIAANR HHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEEEEEEEEEEEEECCCCCEECCC STELWLIPPNAKPIALGVFAADTPAAMALPPAVVAQLSARAVLAVSVEPVGGSPTGEPTG CCEEEEECCCCCEEEEEEEECCCCCHHHCCHHHHHHHCCCEEEEEEEECCCCCCCCCCCC PVIASGAMHEA CEEECCCCCCC >Mature Secondary Structure MNTPAHSDPELRCAEYALGVLDADARRALEREAAADPSLAATLARWQARFAPLAEDVPPI CCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHCCCCC APPARVWTRIQRDLGFLPARGKAAGGERGAAGWWNHLGFWRWLGIGASLATVALVAVTLT CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHH TARHDVPAPGASTAARPGAGYMVATIARADGVAHWTATVDLRRARMVLVPADKPAIAANR HHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEEEEEEEEEEEEECCCCCEECCC STELWLIPPNAKPIALGVFAADTPAAMALPPAVVAQLSARAVLAVSVEPVGGSPTGEPTG CCEEEEECCCCCEEEEEEEECCCCCHHHCCHHHHHHHCCCEEEEEEEECCCCCCCCCCCC PVIASGAMHEA CEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA