| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is cfa [H]
Identifier: 238025218
GI number: 238025218
Start: 2355687
End: 2356781
Strand: Direct
Name: cfa [H]
Synonym: bglu_2g18890
Alternate gene names: 238025218
Gene position: 2355687-2356781 (Clockwise)
Preceding gene: 238025217
Following gene: 238025219
Centisome position: 83.32
GC content: 67.85
Gene sequence:
>1095_bases ATGACAGCGACCACTCTCGATTCGAAATCCGCCGCGGACCGCGACAGCTGGCTGATCCGCTACTGCGAGCGCGGCCGCGT GTCCGATTCGGTGATCCGCGGCGGCATCGCGGCGCTGCTCTGGCAGCGGCTGCGCGCCGAGCACGTCGACGACGACGAGG CGCGCGCCGACGCGCTGAACAGCTTCGTCGAGGAACTGAACCGCAGCCCGATCGCGATCGAAACGCAGGCGGCCAACCGG CAGCACTACGAGATGCCGGCCAGCTTCTTCGCGGCCCATCTCGGCCCGCGCCTCAAGTACTCGTGCTGCTACTTCCCGAC CGGCGAGGATACGCTGGCGCATGCCGAGGACGCGATGCTGGCGCTCTACGCCGAGCGCGCCGAGCTGGCCGACGGCCAGC GCATCCTCGATCTCGGCTGCGGCTGGGGGTCGCTCTCGCTGTGGCTGGCCGAGCGCTATCCGGGCTCGCAGATCGTCGGG CTGTCGAACTCGCAGAGCCAGCGCGCGTTCATCGAGCAGCGCGCGGCCGAGCGCGGCCTGACGAACCTGAAGATCGTCAC GGGCAACGTCGTCGATTTCGAATTCGCGCCCGCCGAGGCGCGCTTCGACCGCGTGCTGTCGATCGAGATGTTCGAGCACA TGAAGAACTATCGCGCGCTGCTGGCGAAGATCTCGCACTGGCTCGACGACCAGGGCAAGCTGTTCGTCCACCTGTTCGCG CACCGGCTGGTGGCTTATCACTTCACGGCACGCGACAGCAGCGATTGGATGTCGCGCCATTTCTTCACGGGCGGCACGAT GCCTTCGGCGGACCTGCTGCTGCGCTTCCAGGACCATCTGCGCGTCGAGCGGCAATGGTGGCTCAACGGCACGCATTACG CGCGCACCGCCAACCACTGGCTGGCCTCGCTCGACGCTGCGCACGAGCAGATCATGCCCGCGCTGCGCGAAACCTTCGGC GACGACGCGCCGATCGTGTTCCAGCGCTGGCGCATGTTCTACATGGCGGTGGCGGGGCTGTTCGGGTTCCGGCGCGGCCG CGAATGGGGCGTCGCGCATTACCTGTTCGACAAGCGTGCGGCGCTCGGCGCCTGA
Upstream 100 bases:
>100_bases GAGCCGGCTATCGCGACTATATCCGCACGACGAGCGCGCTCATCCCGTGGCCGCCGCGCGCGGCCGACCATCACGACCCA CAGGAACGGAGCCCACGATC
Downstream 100 bases:
>100_bases GCCCGGCAGCCCATGAGTGACGGCGACGGTGACGGCGCGACCATGACGAGCCCGGCCCGCCCGGCGGGCGCGCCGGCCGA GCCGGCCCGGCGCCGCGCGC
Product: cyclopropane-fatty-acyl-phospholipid synthase
Products: NA
Alternate protein names: CFA synthase; Cyclopropane fatty acid synthase [H]
Number of amino acids: Translated: 364; Mature: 363
Protein sequence:
>364_residues MTATTLDSKSAADRDSWLIRYCERGRVSDSVIRGGIAALLWQRLRAEHVDDDEARADALNSFVEELNRSPIAIETQAANR QHYEMPASFFAAHLGPRLKYSCCYFPTGEDTLAHAEDAMLALYAERAELADGQRILDLGCGWGSLSLWLAERYPGSQIVG LSNSQSQRAFIEQRAAERGLTNLKIVTGNVVDFEFAPAEARFDRVLSIEMFEHMKNYRALLAKISHWLDDQGKLFVHLFA HRLVAYHFTARDSSDWMSRHFFTGGTMPSADLLLRFQDHLRVERQWWLNGTHYARTANHWLASLDAAHEQIMPALRETFG DDAPIVFQRWRMFYMAVAGLFGFRRGREWGVAHYLFDKRAALGA
Sequences:
>Translated_364_residues MTATTLDSKSAADRDSWLIRYCERGRVSDSVIRGGIAALLWQRLRAEHVDDDEARADALNSFVEELNRSPIAIETQAANR QHYEMPASFFAAHLGPRLKYSCCYFPTGEDTLAHAEDAMLALYAERAELADGQRILDLGCGWGSLSLWLAERYPGSQIVG LSNSQSQRAFIEQRAAERGLTNLKIVTGNVVDFEFAPAEARFDRVLSIEMFEHMKNYRALLAKISHWLDDQGKLFVHLFA HRLVAYHFTARDSSDWMSRHFFTGGTMPSADLLLRFQDHLRVERQWWLNGTHYARTANHWLASLDAAHEQIMPALRETFG DDAPIVFQRWRMFYMAVAGLFGFRRGREWGVAHYLFDKRAALGA >Mature_363_residues TATTLDSKSAADRDSWLIRYCERGRVSDSVIRGGIAALLWQRLRAEHVDDDEARADALNSFVEELNRSPIAIETQAANRQ HYEMPASFFAAHLGPRLKYSCCYFPTGEDTLAHAEDAMLALYAERAELADGQRILDLGCGWGSLSLWLAERYPGSQIVGL SNSQSQRAFIEQRAAERGLTNLKIVTGNVVDFEFAPAEARFDRVLSIEMFEHMKNYRALLAKISHWLDDQGKLFVHLFAH RLVAYHFTARDSSDWMSRHFFTGGTMPSADLLLRFQDHLRVERQWWLNGTHYARTANHWLASLDAAHEQIMPALRETFGD DAPIVFQRWRMFYMAVAGLFGFRRGREWGVAHYLFDKRAALGA
Specific function: Transfers a methylene group from S-adenosyl-L-methionine to the cis double bond of an unsaturated fatty acid chain resulting in the replacement of the double bond with a methylene bridge [H]
COG id: COG2230
COG function: function code M; Cyclopropane fatty acid synthase and related methyltransferases
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CFA/CMAS family [H]
Homologues:
Organism=Escherichia coli, GI1787951, Length=276, Percent_Identity=27.536231884058, Blast_Score=109, Evalue=2e-25, Organism=Caenorhabditis elegans, GI133904226, Length=284, Percent_Identity=25, Blast_Score=72, Evalue=6e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003333 [H]
Pfam domain/function: PF02353 CMAS [H]
EC number: =2.1.1.79 [H]
Molecular weight: Translated: 41537; Mature: 41406
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTATTLDSKSAADRDSWLIRYCERGRVSDSVIRGGIAALLWQRLRAEHVDDDEARADALN CCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH SFVEELNRSPIAIETQAANRQHYEMPASFFAAHLGPRLKYSCCYFPTGEDTLAHAEDAML HHHHHHCCCCEEEEECCCCCCHHHCCHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHH ALYAERAELADGQRILDLGCGWGSLSLWLAERYPGSQIVGLSNSQSQRAFIEQRAAERGL HHHHHHHHHCCCCEEEEECCCCCHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHCCC TNLKIVTGNVVDFEFAPAEARFDRVLSIEMFEHMKNYRALLAKISHWLDDQGKLFVHLFA CEEEEEECCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH HRLVAYHFTARDSSDWMSRHFFTGGTMPSADLLLRFQDHLRVERQWWLNGTHYARTANHW HHHHHHHEECCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH LASLDAAHEQIMPALRETFGDDAPIVFQRWRMFYMAVAGLFGFRRGREWGVAHYLFDKRA HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH ALGA HCCC >Mature Secondary Structure TATTLDSKSAADRDSWLIRYCERGRVSDSVIRGGIAALLWQRLRAEHVDDDEARADALN CCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH SFVEELNRSPIAIETQAANRQHYEMPASFFAAHLGPRLKYSCCYFPTGEDTLAHAEDAML HHHHHHCCCCEEEEECCCCCCHHHCCHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHH ALYAERAELADGQRILDLGCGWGSLSLWLAERYPGSQIVGLSNSQSQRAFIEQRAAERGL HHHHHHHHHCCCCEEEEECCCCCHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHCCC TNLKIVTGNVVDFEFAPAEARFDRVLSIEMFEHMKNYRALLAKISHWLDDQGKLFVHLFA CEEEEEECCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH HRLVAYHFTARDSSDWMSRHFFTGGTMPSADLLLRFQDHLRVERQWWLNGTHYARTANHW HHHHHHHEECCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH LASLDAAHEQIMPALRETFGDDAPIVFQRWRMFYMAVAGLFGFRRGREWGVAHYLFDKRA HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH ALGA HCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]