| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238024747
Identifier: 238024747
GI number: 238024747
Start: 1772936
End: 1774060
Strand: Reverse
Name: 238024747
Synonym: bglu_2g13840
Alternate gene names: NA
Gene position: 1774060-1772936 (Counterclockwise)
Preceding gene: 238024749
Following gene: 238024746
Centisome position: 62.75
GC content: 75.02
Gene sequence:
>1125_bases ATGCCTTTCGACACGTCCTTGCCGCGCAGGCTGCGCGGCGTCGGCCCCGCCTGCGCGCTGGGGCTCGCGCTGGCGGGCGG CCCTGCGGCCGCCGCCCAGGCCGCCGGCCCCGCCAGCGCACCGCACGCCTACCAGCCGCATCTGCGGCCGGTGGCGCGGA TCGCCGCCACGCGCATGCGGATCGACACGCCGGCCGGCAGCGCGCAGTTTCCGCTCTACCTGTCGCGCGACTGGAGCCAG CCGTTGCCCGGCGTGACGCGCGCGGTGATCGTGATTCACGGCAAGTTGCGCAATGCGGACCGCTATTTCAGGCTTGCGGA GGCTGCCCGCGCCGCGGCGCGCGAGCAGGGCGCCGCGGCGGCCGACCAGGCCGGCACGCTGCTGGTCGCGCCGCAGTTTC TCGCCACGCTCGATCTGGCCGGCCGTGACGCGCCGGCCGCGCTGCTGCGCTGGGATGCCAACGGCTGGATGGCGGGCGAC GACGCGGTCAGCCCCGTGCCCCTCAGCTCCTATGCGGTGCTCGATGCGATCGTGGCGCGGCTGGCCGATCGCCGGCGCTT TCCGAACCTGAAGACGGTGGTGCTCGCCGGCCATTCGGGCGGCGGCCAGGTGGTGCAGCGCTACGCGGTGGCCGCGCGCG AGACGGGGGCGCTGTCCCGCGAGGGCATCGCGCTGCGCTACGTGGTGTCGAGCCCGTCGTCGTATGCGTATTTCGACGCC GAGCGCCCCGGCGCGCACGGCAAGCCGGCCGCGTTCGACGCCGCCGCCTGCCCCGGCTTCGACGACTGGAAATACGGCAT GGCCAAACGCCCGCCGTATCTGGCCGACCGCTCGGCCGCGCAGCTCGAGGCCGCCTACGCGGCGCGCCGCGTGACCTATC TGGTCGGCGGCAATGACGACGACCCGCGGCAGCGGGCGCTCGACCGCAGCTGCCCGGCCGAGGCCCAGGGCCCGCAGCGG CTCGCGCGCGCCGAGGCCTATTTCGGCTACCTGCGCGCCCGCCACCCCGAGGGGCTGAATCAGCGCCTGCAGGTGGTGCC CGGCGTCGGCCACGACGGCGCGAAGATGCTGGGATCGGCCTGCGCGCTCGCGGCGATCTACGATACCGCGGCGTGCGGAT CATGA
Upstream 100 bases:
>100_bases GCGCTGAACGGCGCGGCGGTGGCCGGCACGTTCCAGCCTTGCCGAGCGCTTCGTCCGTTTGCCTTGCCCGTTTGACGCCG GCCCACCAGGAGCAGTCCGC
Downstream 100 bases:
>100_bases GCCGCGCCACGCCCGCCCCGGCACACCAGGCAGCGCGGCCGGACGCGGCCGCGGCGCGTCTGTCGCCGGCGATGGTGCGC CGCGCGATCTTCGCCTCGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 374; Mature: 373
Protein sequence:
>374_residues MPFDTSLPRRLRGVGPACALGLALAGGPAAAAQAAGPASAPHAYQPHLRPVARIAATRMRIDTPAGSAQFPLYLSRDWSQ PLPGVTRAVIVIHGKLRNADRYFRLAEAARAAAREQGAAAADQAGTLLVAPQFLATLDLAGRDAPAALLRWDANGWMAGD DAVSPVPLSSYAVLDAIVARLADRRRFPNLKTVVLAGHSGGGQVVQRYAVAARETGALSREGIALRYVVSSPSSYAYFDA ERPGAHGKPAAFDAAACPGFDDWKYGMAKRPPYLADRSAAQLEAAYAARRVTYLVGGNDDDPRQRALDRSCPAEAQGPQR LARAEAYFGYLRARHPEGLNQRLQVVPGVGHDGAKMLGSACALAAIYDTAACGS
Sequences:
>Translated_374_residues MPFDTSLPRRLRGVGPACALGLALAGGPAAAAQAAGPASAPHAYQPHLRPVARIAATRMRIDTPAGSAQFPLYLSRDWSQ PLPGVTRAVIVIHGKLRNADRYFRLAEAARAAAREQGAAAADQAGTLLVAPQFLATLDLAGRDAPAALLRWDANGWMAGD DAVSPVPLSSYAVLDAIVARLADRRRFPNLKTVVLAGHSGGGQVVQRYAVAARETGALSREGIALRYVVSSPSSYAYFDA ERPGAHGKPAAFDAAACPGFDDWKYGMAKRPPYLADRSAAQLEAAYAARRVTYLVGGNDDDPRQRALDRSCPAEAQGPQR LARAEAYFGYLRARHPEGLNQRLQVVPGVGHDGAKMLGSACALAAIYDTAACGS >Mature_373_residues PFDTSLPRRLRGVGPACALGLALAGGPAAAAQAAGPASAPHAYQPHLRPVARIAATRMRIDTPAGSAQFPLYLSRDWSQP LPGVTRAVIVIHGKLRNADRYFRLAEAARAAAREQGAAAADQAGTLLVAPQFLATLDLAGRDAPAALLRWDANGWMAGDD AVSPVPLSSYAVLDAIVARLADRRRFPNLKTVVLAGHSGGGQVVQRYAVAARETGALSREGIALRYVVSSPSSYAYFDAE RPGAHGKPAAFDAAACPGFDDWKYGMAKRPPYLADRSAAQLEAAYAARRVTYLVGGNDDDPRQRALDRSCPAEAQGPQRL ARAEAYFGYLRARHPEGLNQRLQVVPGVGHDGAKMLGSACALAAIYDTAACGS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39374; Mature: 39243
Theoretical pI: Translated: 9.77; Mature: 9.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFDTSLPRRLRGVGPACALGLALAGGPAAAAQAAGPASAPHAYQPHLRPVARIAATRMR CCCCCCCHHHHHCCCHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHE IDTPAGSAQFPLYLSRDWSQPLPGVTRAVIVIHGKLRNADRYFRLAEAARAAAREQGAAA EECCCCCCCCCEEEECCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCH ADQAGTLLVAPQFLATLDLAGRDAPAALLRWDANGWMAGDDAVSPVPLSSYAVLDAIVAR HHHCCEEEECHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHH LADRRRFPNLKTVVLAGHSGGGQVVQRYAVAARETGALSREGIALRYVVSSPSSYAYFDA HHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCEEEEEC ERPGAHGKPAAFDAAACPGFDDWKYGMAKRPPYLADRSAAQLEAAYAARRVTYLVGGNDD CCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHEEEEEECCCCC DPRQRALDRSCPAEAQGPQRLARAEAYFGYLRARHPEGLNQRLQVVPGVGHDGAKMLGSA CHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHEECCCCCCCHHHHHHHH CALAAIYDTAACGS HHHHHHHHHHCCCC >Mature Secondary Structure PFDTSLPRRLRGVGPACALGLALAGGPAAAAQAAGPASAPHAYQPHLRPVARIAATRMR CCCCCCHHHHHCCCHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHE IDTPAGSAQFPLYLSRDWSQPLPGVTRAVIVIHGKLRNADRYFRLAEAARAAAREQGAAA EECCCCCCCCCEEEECCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCH ADQAGTLLVAPQFLATLDLAGRDAPAALLRWDANGWMAGDDAVSPVPLSSYAVLDAIVAR HHHCCEEEECHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHH LADRRRFPNLKTVVLAGHSGGGQVVQRYAVAARETGALSREGIALRYVVSSPSSYAYFDA HHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCEEEEEC ERPGAHGKPAAFDAAACPGFDDWKYGMAKRPPYLADRSAAQLEAAYAARRVTYLVGGNDD CCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHEEEEEECCCCC DPRQRALDRSCPAEAQGPQRLARAEAYFGYLRARHPEGLNQRLQVVPGVGHDGAKMLGSA CHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHEECCCCCCCHHHHHHHH CALAAIYDTAACGS HHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA