| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238024749
Identifier: 238024749
GI number: 238024749
Start: 1775584
End: 1775922
Strand: Reverse
Name: 238024749
Synonym: bglu_2g13860
Alternate gene names: NA
Gene position: 1775922-1775584 (Counterclockwise)
Preceding gene: 238024750
Following gene: 238024747
Centisome position: 62.81
GC content: 74.04
Gene sequence:
>339_bases ATGACGAACCGACCGCATGACGCGAGGCCCGATGCGCCGCGCGACCACGACGCCGACGACGCCGACGACGCCGACGACGA GGGCGGGCTCGATCCGACCGTCGCCGCGGTGCTGCAACAGTTGCGCGAGGCGCTGGCCGAGACGCCGGGGCGCGCCTGGT CGCTCGCGAAGCTCGGCAAGCGCTCGCAGGTGCCGATGAGCACGCTGCGGCGCACGCTCACGCAGCTCGACGCGGCCGGC CTCACGGCCACCGAACTCGGCGAGGACGGCAGCGGGCACGCGGTGCTGACGCAGGAGGGCGTGGCGCTCTGCGAGGTGCT GTTCGGCGCCAACGACTGA
Upstream 100 bases:
>100_bases CCCGCGTCGCGCACGGCGGCGGGCATGACGGGCATGGCAAGGACGAGGGCAAGGGCGGCACCAAGCCGCGCAAGCGAGTG ACGAACCGGCAGGAGACGCG
Downstream 100 bases:
>100_bases GGGCGCCAGCGCGGCACCGCGCGGGCGCGATGCCGGCGCCGGAGGCTGCCTCGCAGGTCGCCTCGCGCATCGCCCGCGCG GCCTCCGGCGCGCCCGGGCA
Product: putative DNA-binding protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 112; Mature: 111
Protein sequence:
>112_residues MTNRPHDARPDAPRDHDADDADDADDEGGLDPTVAAVLQQLREALAETPGRAWSLAKLGKRSQVPMSTLRRTLTQLDAAG LTATELGEDGSGHAVLTQEGVALCEVLFGAND
Sequences:
>Translated_112_residues MTNRPHDARPDAPRDHDADDADDADDEGGLDPTVAAVLQQLREALAETPGRAWSLAKLGKRSQVPMSTLRRTLTQLDAAG LTATELGEDGSGHAVLTQEGVALCEVLFGAND >Mature_111_residues TNRPHDARPDAPRDHDADDADDADDEGGLDPTVAAVLQQLREALAETPGRAWSLAKLGKRSQVPMSTLRRTLTQLDAAGL TATELGEDGSGHAVLTQEGVALCEVLFGAND
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11817; Mature: 11686
Theoretical pI: Translated: 4.20; Mature: 4.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNRPHDARPDAPRDHDADDADDADDEGGLDPTVAAVLQQLREALAETPGRAWSLAKLGK CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHCC RSQVPMSTLRRTLTQLDAAGLTATELGEDGSGHAVLTQEGVALCEVLFGAND CCCCCHHHHHHHHHHHHHCCCCHHHCCCCCCCCEEECHHHHHHHHHHHCCCC >Mature Secondary Structure TNRPHDARPDAPRDHDADDADDADDEGGLDPTVAAVLQQLREALAETPGRAWSLAKLGK CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHCC RSQVPMSTLRRTLTQLDAAGLTATELGEDGSGHAVLTQEGVALCEVLFGAND CCCCCHHHHHHHHHHHHHCCCCHHHCCCCCCCCEEECHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA