| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238024693
Identifier: 238024693
GI number: 238024693
Start: 1704807
End: 1706051
Strand: Reverse
Name: 238024693
Synonym: bglu_2g13280
Alternate gene names: NA
Gene position: 1706051-1704807 (Counterclockwise)
Preceding gene: 238024696
Following gene: 238024692
Centisome position: 60.34
GC content: 61.93
Gene sequence:
>1245_bases ATGATCCAGCTTCTCCTCCATTTGCTCGGCGCGCGCTATCTTGGCCGTCATGTTACGAAACTGCTGATTCTCGGCGCGAT CTGGCTTGGCGTCGGAGCATTCGTGGTAGTCGATGCGCTGGACGGCGCACTGTGGTTTCCGCTGCAAACCTTCGGCGTGC TGCTGGCAACGGAAGGCGCCGCTGCGATCGTGCTGGCGAAGAGCGGCTTGTCTATACAGACCCGCTTTCGCGTTATAAAA GGTCTGATCGGCGTGCTGATTGGCATACTCATCATCATCCGCCACCGCTATTCCGACTTTCTCCTCGCCATGACTTTCGG TGCGGGCTTCGCGCTAGAGGGGGCTCTCCTTATCGCGGCGGCATGGGTGGTGCGGTACCGCCATTGGCGCTCCACCATGG CGCTCGGCGCGATGAGCCTGGCGCTGGCGATCTTTTTCTTCCAACCGTACCCGACGCACTATCGCGGCACGGTGCCGTAC TGCATCGGCCTGTGGATGGCCGTCAGCGGCTGCCGCATGATCTGGCTGTATCTCCGTGTGCGCAAGGGGGTGCTGGCGGA AGTCGCGGACACGCCATTGAACGTGACTTCCAATGCGGTGCCGATGATCGTGCACGTATGGACACCTGTAGGTTCGGCAA AGAGTAAGGCGCTCAACCGCCCGGTGATGGATCGCTATATCGCCGCAGTCGACGCCGACGGTGTGATTTCCACCGGTCAT GCGGCGCTGGAGGCTGGCGATCTTTACTTGAGCCTCTACCCCGCAGTGGAGATCGACCGTTCTCCTGAAGAGTTCGCACG TTTGCTGCGGGCCGATGCCTTCAACAACGTGGCTGGACGTTATCTGCCGAGCTATCCGGAAGAAGCGGCCAACTGGTGCG AATCGACCGCGCGCATTACTTTCCGCCGTTTCGATTTTGCCCGTCTTCGCGACTTCGTGCGTGGCTATCAATCAACCGCG ATCTACAACCTTACCAATCGAAACTGTTCGAGCACCGTCGCGGAAGGCCTCGAAGCCGCGCTCGCGGGCACGGCGTATCG CGACGGTGGCTGGGCGGATGCGCTGCGCCCGATCGCGACGCCCGAATTGTGGATCGCCGCGCAGTTGCGCCATCGCGCCC GCACCATGGCATGGACGCCGGGACTGGTGCTCGATTACGCACGCGCGCTACGCGTGGTGACCGATCCACCAGCGCTCGGT TGGCTTGCACTGGCGACGCGGGTTTTCAGACATGCGCGCCGCTAG
Upstream 100 bases:
>100_bases GCTAAAGATGTGTCTGCGTCGCACGATGCTCGATGCTCGATGATACGTCCGACGAGCAGGGCGTTCCGCCTCATGCTTTA GCCGATAGCGTTACAAGAAA
Downstream 100 bases:
>100_bases CCGCGCCGGATCGCCTCATGGAAAAGTTCACGCACGTGCGCATTGTCATGGGCATGATCGTCAGCCTTGGGCTGACACAT ATGCTCAAGGGACTGAGTTT
Product: putative Zn-dependent protease
Products: NA
Alternate protein names: Zn-Dependent Proteases; Conserved Protein
Number of amino acids: Translated: 414; Mature: 414
Protein sequence:
>414_residues MIQLLLHLLGARYLGRHVTKLLILGAIWLGVGAFVVVDALDGALWFPLQTFGVLLATEGAAAIVLAKSGLSIQTRFRVIK GLIGVLIGILIIIRHRYSDFLLAMTFGAGFALEGALLIAAAWVVRYRHWRSTMALGAMSLALAIFFFQPYPTHYRGTVPY CIGLWMAVSGCRMIWLYLRVRKGVLAEVADTPLNVTSNAVPMIVHVWTPVGSAKSKALNRPVMDRYIAAVDADGVISTGH AALEAGDLYLSLYPAVEIDRSPEEFARLLRADAFNNVAGRYLPSYPEEAANWCESTARITFRRFDFARLRDFVRGYQSTA IYNLTNRNCSSTVAEGLEAALAGTAYRDGGWADALRPIATPELWIAAQLRHRARTMAWTPGLVLDYARALRVVTDPPALG WLALATRVFRHARR
Sequences:
>Translated_414_residues MIQLLLHLLGARYLGRHVTKLLILGAIWLGVGAFVVVDALDGALWFPLQTFGVLLATEGAAAIVLAKSGLSIQTRFRVIK GLIGVLIGILIIIRHRYSDFLLAMTFGAGFALEGALLIAAAWVVRYRHWRSTMALGAMSLALAIFFFQPYPTHYRGTVPY CIGLWMAVSGCRMIWLYLRVRKGVLAEVADTPLNVTSNAVPMIVHVWTPVGSAKSKALNRPVMDRYIAAVDADGVISTGH AALEAGDLYLSLYPAVEIDRSPEEFARLLRADAFNNVAGRYLPSYPEEAANWCESTARITFRRFDFARLRDFVRGYQSTA IYNLTNRNCSSTVAEGLEAALAGTAYRDGGWADALRPIATPELWIAAQLRHRARTMAWTPGLVLDYARALRVVTDPPALG WLALATRVFRHARR >Mature_414_residues MIQLLLHLLGARYLGRHVTKLLILGAIWLGVGAFVVVDALDGALWFPLQTFGVLLATEGAAAIVLAKSGLSIQTRFRVIK GLIGVLIGILIIIRHRYSDFLLAMTFGAGFALEGALLIAAAWVVRYRHWRSTMALGAMSLALAIFFFQPYPTHYRGTVPY CIGLWMAVSGCRMIWLYLRVRKGVLAEVADTPLNVTSNAVPMIVHVWTPVGSAKSKALNRPVMDRYIAAVDADGVISTGH AALEAGDLYLSLYPAVEIDRSPEEFARLLRADAFNNVAGRYLPSYPEEAANWCESTARITFRRFDFARLRDFVRGYQSTA IYNLTNRNCSSTVAEGLEAALAGTAYRDGGWADALRPIATPELWIAAQLRHRARTMAWTPGLVLDYARALRVVTDPPALG WLALATRVFRHARR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45674; Mature: 45674
Theoretical pI: Translated: 10.10; Mature: 10.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIQLLLHLLGARYLGRHVTKLLILGAIWLGVGAFVVVDALDGALWFPLQTFGVLLATEGA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCC AAIVLAKSGLSIQTRFRVIKGLIGVLIGILIIIRHRYSDFLLAMTFGAGFALEGALLIAA EEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH AWVVRYRHWRSTMALGAMSLALAIFFFQPYPTHYRGTVPYCIGLWMAVSGCRMIWLYLRV HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH RKGVLAEVADTPLNVTSNAVPMIVHVWTPVGSAKSKALNRPVMDRYIAAVDADGVISTGH HHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCHHHHHCCCHHHHHHHHHCCCCCCEECCC AALEAGDLYLSLYPAVEIDRSPEEFARLLRADAFNNVAGRYLPSYPEEAANWCESTARIT HHHCCCCEEEEEECCEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH FRRFDFARLRDFVRGYQSTAIYNLTNRNCSSTVAEGLEAALAGTAYRDGGWADALRPIAT HHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCC PELWIAAQLRHRARTMAWTPGLVLDYARALRVVTDPPALGWLALATRVFRHARR CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure MIQLLLHLLGARYLGRHVTKLLILGAIWLGVGAFVVVDALDGALWFPLQTFGVLLATEGA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCC AAIVLAKSGLSIQTRFRVIKGLIGVLIGILIIIRHRYSDFLLAMTFGAGFALEGALLIAA EEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH AWVVRYRHWRSTMALGAMSLALAIFFFQPYPTHYRGTVPYCIGLWMAVSGCRMIWLYLRV HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH RKGVLAEVADTPLNVTSNAVPMIVHVWTPVGSAKSKALNRPVMDRYIAAVDADGVISTGH HHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCHHHHHCCCHHHHHHHHHCCCCCCEECCC AALEAGDLYLSLYPAVEIDRSPEEFARLLRADAFNNVAGRYLPSYPEEAANWCESTARIT HHHCCCCEEEEEECCEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH FRRFDFARLRDFVRGYQSTAIYNLTNRNCSSTVAEGLEAALAGTAYRDGGWADALRPIAT HHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCC PELWIAAQLRHRARTMAWTPGLVLDYARALRVVTDPPALGWLALATRVFRHARR CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA