| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238024692
Identifier: 238024692
GI number: 238024692
Start: 1704220
End: 1704789
Strand: Reverse
Name: 238024692
Synonym: bglu_2g13270
Alternate gene names: NA
Gene position: 1704789-1704220 (Counterclockwise)
Preceding gene: 238024693
Following gene: 238024691
Centisome position: 60.3
GC content: 51.93
Gene sequence:
>570_bases ATGGAAAAGTTCACGCACGTGCGCATTGTCATGGGCATGATCGTCAGCCTTGGGCTGACACATATGCTCAAGGGACTGAG TTTGACGGTCCAGCATCCGTCGCACAAGAATATCTATCCGATCCATATGGCGTGGGTCGCGTCGTTGATTCTGAATATCC TGCAGTTCTGGTGGTGGGAATTCTCGCTGAAAGAGATCCCGGTGTGGACCTTCGGTATTTACCTGTACCTGATCTTCTAT GCGTTCATCATCTATCTGATGAGCGCGATGCTTTTTCCCGACTCGTTGCGTGACTACAAGGACTATCGCGACTATTTCAT GTCGCGGCGCGTGTGGTTTTTCGGCCTCGCACTTGCAGAAAACATCGTCGATATCGGCGATTCATTGATCAAGGGCGAGT TGCACGTAGCGGAACTCGGAGATTTTTACTGGATAAAGGCCGCCGCGTTTAGCGTCTGCTGCATTGTGGCCATGCGCACG CGCAATCAGGTCTACCATGCGAGCTTCGTCGCGCTGAATCTCATTGCGCAGGTCATGCTCGTCGCGAATATGTCATGGAA CCATGTGTGA
Upstream 100 bases:
>100_bases GCGCGCTACGCGTGGTGACCGATCCACCAGCGCTCGGTTGGCTTGCACTGGCGACGCGGGTTTTCAGACATGCGCGCCGC TAGCCGCGCCGGATCGCCTC
Downstream 100 bases:
>100_bases AGTTCGATGCGCCGTTGGTTGAGGAATAGTGACGTGCTGCTCCGGCCCTATACGATCCGCTACTCAACGCCCGTGTTCCA CGTGAATGCGGTAAATGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 189; Mature: 189
Protein sequence:
>189_residues MEKFTHVRIVMGMIVSLGLTHMLKGLSLTVQHPSHKNIYPIHMAWVASLILNILQFWWWEFSLKEIPVWTFGIYLYLIFY AFIIYLMSAMLFPDSLRDYKDYRDYFMSRRVWFFGLALAENIVDIGDSLIKGELHVAELGDFYWIKAAAFSVCCIVAMRT RNQVYHASFVALNLIAQVMLVANMSWNHV
Sequences:
>Translated_189_residues MEKFTHVRIVMGMIVSLGLTHMLKGLSLTVQHPSHKNIYPIHMAWVASLILNILQFWWWEFSLKEIPVWTFGIYLYLIFY AFIIYLMSAMLFPDSLRDYKDYRDYFMSRRVWFFGLALAENIVDIGDSLIKGELHVAELGDFYWIKAAAFSVCCIVAMRT RNQVYHASFVALNLIAQVMLVANMSWNHV >Mature_189_residues MEKFTHVRIVMGMIVSLGLTHMLKGLSLTVQHPSHKNIYPIHMAWVASLILNILQFWWWEFSLKEIPVWTFGIYLYLIFY AFIIYLMSAMLFPDSLRDYKDYRDYFMSRRVWFFGLALAENIVDIGDSLIKGELHVAELGDFYWIKAAAFSVCCIVAMRT RNQVYHASFVALNLIAQVMLVANMSWNHV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22143; Mature: 22143
Theoretical pI: Translated: 8.23; Mature: 8.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 5.8 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 5.8 %Met (Mature Protein) 6.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKFTHVRIVMGMIVSLGLTHMLKGLSLTVQHPSHKNIYPIHMAWVASLILNILQFWWWE CCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCEEHHHHHHHHHHHHHHHHHHHHH FSLKEIPVWTFGIYLYLIFYAFIIYLMSAMLFPDSLRDYKDYRDYFMSRRVWFFGLALAE HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH NIVDIGDSLIKGELHVAELGDFYWIKAAAFSVCCIVAMRTRNQVYHASFVALNLIAQVML HHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH VANMSWNHV HHCCCCCCC >Mature Secondary Structure MEKFTHVRIVMGMIVSLGLTHMLKGLSLTVQHPSHKNIYPIHMAWVASLILNILQFWWWE CCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCEEHHHHHHHHHHHHHHHHHHHHH FSLKEIPVWTFGIYLYLIFYAFIIYLMSAMLFPDSLRDYKDYRDYFMSRRVWFFGLALAE HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH NIVDIGDSLIKGELHVAELGDFYWIKAAAFSVCCIVAMRTRNQVYHASFVALNLIAQVML HHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH VANMSWNHV HHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA