| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238024270
Identifier: 238024270
GI number: 238024270
Start: 1033584
End: 1035797
Strand: Direct
Name: 238024270
Synonym: bglu_2g08530
Alternate gene names: NA
Gene position: 1033584-1035797 (Clockwise)
Preceding gene: 238024267
Following gene: 238024271
Centisome position: 36.56
GC content: 70.46
Gene sequence:
>2214_bases TTGCGACGTTCGCCCCCGATCGCCCTCACTGCCCTGATCATCCTGATCCTCGCCGCCTGCCTGCCGCTGCACGCGCGGGG CGCGGCCACGCTCGAGGCCAGCAATTCGTGGATCGGCAACACCTACGGCTACGGCGACGGCAGCTGGACCCAGATCGATA TCCGCGCGATTGCCGTCACGCCCGACGGCAAGGTCTACACGAATGCGCCCTGGGACGAGAGCGGCGCCGAGGCGAGCGTC TATCAGGACGGCCGGATGCTCGGCTTCGCGGGCGGCACGCACGGCTGGGGCAATGCCGGCGGCAACGCGATCGCCGTCAA CGACCACTACGCGTATGTCGCGATCGGCGTCGGCAACGAGAAGGGCCGGCTCGTGAACCCCGGCATCTGGCCGGAGAAGG GCCGCCAGTGGTACGGCATCTCGCGGCGCGCGATCGGTGACCTGAAGCGGCCCGCGCCGTTCCGCGCGGCGGCCGCCGGC GACGCGCGCGGCAAGCTGGCCGCGAGCTTCCTGAAGGTCAACGACGTGCCGGTCGACACGCGCGCCGAGATCGCCGGCCT GGCCGCCTCGAACCAGCGTCTCTACGCCACCGATCCGCAGCACGACAGCGTGGACGTCTACGATGCCGGGTCGATGGACA AGCTCGCCTCGTTCACGGCGCACGAGCCGGGCCGCATCGCGCTGGCCGCCGACGGCACGCTGTGGCTGCTGACCGATTCG GTGCACGGCCCCGCGAAGCTCGCCCACCTGCGAGCCGACGGCCGCGCGATCGACGACGCGCCGGCGCTGCCGGCCGACAC CGACGCGGTGGACGTGGCGGTCGATGCCAAGGGCCGCCTGCTGATCGCCGACAACGGCCCGCGCCAGCAGATCCTGATCT ACGCGAAATCGGACCACGGCTATGCGCCGAGCGGCACGCTCGGCGAGCGCGGCGGCATCTTCTCGGGGGTGGCGGGCCGC CCCGGCCCGCAGCGCTTCAACGGCCTGACCGGCGTGGGTGCCGATCGCGACGGCAACATCTACGTGGCGATGAACGGCAT CGGCGTGAAGCAGGGCTCGCTCGGCGCGGGGCTCGGCGCGACGCTCGCGAGCTACGCGCCCGACGGCAAGCTGCGCTGGC AGGTGGATGGCCTGCTGTTCGTGGACGGCGCCTGGATCGATCCGGCGCGGCCGAACAGCGTCTACACCGGCAACAAGCGC TTCGAGCTCGATTTCTCGAAGCCGGCCGGCCGCGAGTGGCGCTACGCGGGCTTCCTGACGAACCGCTTCAAGTATCCGCA GGACCCCGTGTTCACCACCGACCAGTGGCCCGGCATGCCCACCGCGCGCCGGCTCGACGGCCACACGTTCCTGTATCTGA CCGACATGTATGCCGATCACCTGAAGATCTACCGCTTCGATCCGAAGCGCGACGGCGAGACCGCGATCCCGTCCGGCCTG ATCGCCGGGCGCGCACGGCCCGTGGACCGGGTGCCGAACCGGCCGTCGGGCGGCGACTGGATCTGGCGCGACCAGAACGG CAACGGCCGCTTCGAGGACGGCGAATTCTCGCTGAACACCACCGGCAAGCCGAAGGCGGCGGGCGGCTGGGGCTGGTGGA TCGACGCCCGCGGCGACATCTGGCGCGCCAGCGACACGCGCGGCATCCACCGCTTCCGCTACGGCGGCCTCGACAAGGCC GGCAACCCGATCTATTCGTTCGACAAGCTGACCGACTATCCGACCCCGGCGCCGTTCACCGAGCTGCGCCGCGCCATCTA CGAACCGGACACCGACACGCTCTACGTGACGGGCTACACGGCCGACATGCCGCCGAAGGGCGGCATCAACAAGGAGGTCG GCCCGGTGCTGGTGCGCTACGACAAGTGGTCGAGCGGCGAGCCGGTGCAGCGCTACCAGCTGGCGCTGCCGTGGCGGCTC GACGCCAAGCCGATCTTCGACCTGATCGGGCTCACCGTCGAGGGGCGCTACCTGTTCGGCGTGGAGCCGGCCGGCATCGT CCACGTCTACGACAAGCAGAACGGTCACGAACTCGGCGTGATCAAGCCGGGCGCCGAGGTCGGACATGCCTCGGGCTGGG TGGACGTGCCGTTCGGCATCAGCGCGCACCGGCGCGAGAACGGCGAGTACCTGATCTTCGTGGAGGAAGACGCGCGCGGC AAGGTGATGATGTACCGGTGGACGCCGCGCTCGACGGAGGCGACCCAGCCATGA
Upstream 100 bases:
>100_bases GCGCGGCCCGATGCGAACGCGCTTGCTGCGGGCACACGCGAGGGCCGCCGCCGGCGCGGCACGGACCGTTTTGCCCATCC GTCCACTTCGGAGAGCCCCA
Downstream 100 bases:
>100_bases CGATCGAGATGACGGCGGTGAACGCGCGGCGCGGCGCAAGGCGGCGCCATGGATAAGCGAATCCTGAAGAACGTCGCGGT GAATTTCGTCGGCCTGATCC
Product: NHL repeat-containing protein
Products: NA
Alternate protein names: NHL Repeat-Containing Protein; SMP-30/Gluconolaconase/LRE Domain-Containing Protein; WD40-Like Repeat; SMP-30/Gluconolaconase/LRE Domain Protein; SMP-30/Gluconolaconase/LRE-Like Region-Containing Protein
Number of amino acids: Translated: 737; Mature: 737
Protein sequence:
>737_residues MRRSPPIALTALIILILAACLPLHARGAATLEASNSWIGNTYGYGDGSWTQIDIRAIAVTPDGKVYTNAPWDESGAEASV YQDGRMLGFAGGTHGWGNAGGNAIAVNDHYAYVAIGVGNEKGRLVNPGIWPEKGRQWYGISRRAIGDLKRPAPFRAAAAG DARGKLAASFLKVNDVPVDTRAEIAGLAASNQRLYATDPQHDSVDVYDAGSMDKLASFTAHEPGRIALAADGTLWLLTDS VHGPAKLAHLRADGRAIDDAPALPADTDAVDVAVDAKGRLLIADNGPRQQILIYAKSDHGYAPSGTLGERGGIFSGVAGR PGPQRFNGLTGVGADRDGNIYVAMNGIGVKQGSLGAGLGATLASYAPDGKLRWQVDGLLFVDGAWIDPARPNSVYTGNKR FELDFSKPAGREWRYAGFLTNRFKYPQDPVFTTDQWPGMPTARRLDGHTFLYLTDMYADHLKIYRFDPKRDGETAIPSGL IAGRARPVDRVPNRPSGGDWIWRDQNGNGRFEDGEFSLNTTGKPKAAGGWGWWIDARGDIWRASDTRGIHRFRYGGLDKA GNPIYSFDKLTDYPTPAPFTELRRAIYEPDTDTLYVTGYTADMPPKGGINKEVGPVLVRYDKWSSGEPVQRYQLALPWRL DAKPIFDLIGLTVEGRYLFGVEPAGIVHVYDKQNGHELGVIKPGAEVGHASGWVDVPFGISAHRRENGEYLIFVEEDARG KVMMYRWTPRSTEATQP
Sequences:
>Translated_737_residues MRRSPPIALTALIILILAACLPLHARGAATLEASNSWIGNTYGYGDGSWTQIDIRAIAVTPDGKVYTNAPWDESGAEASV YQDGRMLGFAGGTHGWGNAGGNAIAVNDHYAYVAIGVGNEKGRLVNPGIWPEKGRQWYGISRRAIGDLKRPAPFRAAAAG DARGKLAASFLKVNDVPVDTRAEIAGLAASNQRLYATDPQHDSVDVYDAGSMDKLASFTAHEPGRIALAADGTLWLLTDS VHGPAKLAHLRADGRAIDDAPALPADTDAVDVAVDAKGRLLIADNGPRQQILIYAKSDHGYAPSGTLGERGGIFSGVAGR PGPQRFNGLTGVGADRDGNIYVAMNGIGVKQGSLGAGLGATLASYAPDGKLRWQVDGLLFVDGAWIDPARPNSVYTGNKR FELDFSKPAGREWRYAGFLTNRFKYPQDPVFTTDQWPGMPTARRLDGHTFLYLTDMYADHLKIYRFDPKRDGETAIPSGL IAGRARPVDRVPNRPSGGDWIWRDQNGNGRFEDGEFSLNTTGKPKAAGGWGWWIDARGDIWRASDTRGIHRFRYGGLDKA GNPIYSFDKLTDYPTPAPFTELRRAIYEPDTDTLYVTGYTADMPPKGGINKEVGPVLVRYDKWSSGEPVQRYQLALPWRL DAKPIFDLIGLTVEGRYLFGVEPAGIVHVYDKQNGHELGVIKPGAEVGHASGWVDVPFGISAHRRENGEYLIFVEEDARG KVMMYRWTPRSTEATQP >Mature_737_residues MRRSPPIALTALIILILAACLPLHARGAATLEASNSWIGNTYGYGDGSWTQIDIRAIAVTPDGKVYTNAPWDESGAEASV YQDGRMLGFAGGTHGWGNAGGNAIAVNDHYAYVAIGVGNEKGRLVNPGIWPEKGRQWYGISRRAIGDLKRPAPFRAAAAG DARGKLAASFLKVNDVPVDTRAEIAGLAASNQRLYATDPQHDSVDVYDAGSMDKLASFTAHEPGRIALAADGTLWLLTDS VHGPAKLAHLRADGRAIDDAPALPADTDAVDVAVDAKGRLLIADNGPRQQILIYAKSDHGYAPSGTLGERGGIFSGVAGR PGPQRFNGLTGVGADRDGNIYVAMNGIGVKQGSLGAGLGATLASYAPDGKLRWQVDGLLFVDGAWIDPARPNSVYTGNKR FELDFSKPAGREWRYAGFLTNRFKYPQDPVFTTDQWPGMPTARRLDGHTFLYLTDMYADHLKIYRFDPKRDGETAIPSGL IAGRARPVDRVPNRPSGGDWIWRDQNGNGRFEDGEFSLNTTGKPKAAGGWGWWIDARGDIWRASDTRGIHRFRYGGLDKA GNPIYSFDKLTDYPTPAPFTELRRAIYEPDTDTLYVTGYTADMPPKGGINKEVGPVLVRYDKWSSGEPVQRYQLALPWRL DAKPIFDLIGLTVEGRYLFGVEPAGIVHVYDKQNGHELGVIKPGAEVGHASGWVDVPFGISAHRRENGEYLIFVEEDARG KVMMYRWTPRSTEATQP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 80092; Mature: 80092
Theoretical pI: Translated: 7.28; Mature: 7.28
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRSPPIALTALIILILAACLPLHARGAATLEASNSWIGNTYGYGDGSWTQIDIRAIAVT CCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCEECCCCCEEEEEEEEEEEC PDGKVYTNAPWDESGAEASVYQDGRMLGFAGGTHGWGNAGGNAIAVNDHYAYVAIGVGNE CCCCEEECCCCCCCCCCEEEECCCCEEEECCCCCCCCCCCCCEEEEECCEEEEEEEECCC KGRLVNPGIWPEKGRQWYGISRRAIGDLKRPAPFRAAAAGDARGKLAASFLKVNDVPVDT CCCEECCCCCCCCCCEEECCCHHHHHCCCCCCCCEEECCCCCCCCEEEEEEEECCCCCCC RAEIAGLAASNQRLYATDPQHDSVDVYDAGSMDKLASFTAHEPGRIALAADGTLWLLTDS CHHHEEEEECCCEEEECCCCCCCEEEEECCCHHHHHHHHCCCCCEEEEEECCEEEEEECC VHGPAKLAHLRADGRAIDDAPALPADTDAVDVAVDAKGRLLIADNGPRQQILIYAKSDHG CCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCEEEEECCCCCEEEEEEEECCCC YAPSGTLGERGGIFSGVAGRPGPQRFNGLTGVGADRDGNIYVAMNGIGVKQGSLGAGLGA CCCCCCCCCCCCEEECCCCCCCHHHHCCCCCCCCCCCCCEEEEECCCEEECCCCCCCHHH TLASYAPDGKLRWQVDGLLFVDGAWIDPARPNSVYTGNKRFELDFSKPAGREWRYAGFLT HHHHCCCCCEEEEEECCEEEECCEECCCCCCCCEEECCEEEEEECCCCCCCCEEEEEEEE NRFKYPQDPVFTTDQWPGMPTARRLDGHTFLYLTDMYADHLKIYRFDPKRDGETAIPSGL CCCCCCCCCCEECCCCCCCCCHHCCCCEEEEEEECCCCCCEEEEEECCCCCCCCCCCCCH IAGRARPVDRVPNRPSGGDWIWRDQNGNGRFEDGEFSLNTTGKPKAAGGWGWWIDARGDI HCCCCCCHHHCCCCCCCCCEEEECCCCCCCCCCCCEEECCCCCCCCCCCEEEEEECCCCE WRASDTRGIHRFRYGGLDKAGNPIYSFDKLTDYPTPAPFTELRRAIYEPDTDTLYVTGYT EECCCCCCCEEEECCCCCCCCCCCEEHHHCCCCCCCCCHHHHHHHHCCCCCCEEEEEEEE ADMPPKGGINKEVGPVLVRYDKWSSGEPVQRYQLALPWRLDAKPIFDLIGLTVEGRYLFG CCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEECCEECCCCHHHHHHCEEECCEEEEE VEPAGIVHVYDKQNGHELGVIKPGAEVGHASGWVDVPFGISAHRRENGEYLIFVEEDARG CCCCCEEEEEECCCCCEEEEECCCHHCCCCCCEEECCCCCCCEECCCCCEEEEEECCCCC KVMMYRWTPRSTEATQP CEEEEEECCCCCCCCCC >Mature Secondary Structure MRRSPPIALTALIILILAACLPLHARGAATLEASNSWIGNTYGYGDGSWTQIDIRAIAVT CCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCEECCCCCEEEEEEEEEEEC PDGKVYTNAPWDESGAEASVYQDGRMLGFAGGTHGWGNAGGNAIAVNDHYAYVAIGVGNE CCCCEEECCCCCCCCCCEEEECCCCEEEECCCCCCCCCCCCCEEEEECCEEEEEEEECCC KGRLVNPGIWPEKGRQWYGISRRAIGDLKRPAPFRAAAAGDARGKLAASFLKVNDVPVDT CCCEECCCCCCCCCCEEECCCHHHHHCCCCCCCCEEECCCCCCCCEEEEEEEECCCCCCC RAEIAGLAASNQRLYATDPQHDSVDVYDAGSMDKLASFTAHEPGRIALAADGTLWLLTDS CHHHEEEEECCCEEEECCCCCCCEEEEECCCHHHHHHHHCCCCCEEEEEECCEEEEEECC VHGPAKLAHLRADGRAIDDAPALPADTDAVDVAVDAKGRLLIADNGPRQQILIYAKSDHG CCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCEEEEECCCCCEEEEEEEECCCC YAPSGTLGERGGIFSGVAGRPGPQRFNGLTGVGADRDGNIYVAMNGIGVKQGSLGAGLGA CCCCCCCCCCCCEEECCCCCCCHHHHCCCCCCCCCCCCCEEEEECCCEEECCCCCCCHHH TLASYAPDGKLRWQVDGLLFVDGAWIDPARPNSVYTGNKRFELDFSKPAGREWRYAGFLT HHHHCCCCCEEEEEECCEEEECCEECCCCCCCCEEECCEEEEEECCCCCCCCEEEEEEEE NRFKYPQDPVFTTDQWPGMPTARRLDGHTFLYLTDMYADHLKIYRFDPKRDGETAIPSGL CCCCCCCCCCEECCCCCCCCCHHCCCCEEEEEEECCCCCCEEEEEECCCCCCCCCCCCCH IAGRARPVDRVPNRPSGGDWIWRDQNGNGRFEDGEFSLNTTGKPKAAGGWGWWIDARGDI HCCCCCCHHHCCCCCCCCCEEEECCCCCCCCCCCCEEECCCCCCCCCCCEEEEEECCCCE WRASDTRGIHRFRYGGLDKAGNPIYSFDKLTDYPTPAPFTELRRAIYEPDTDTLYVTGYT EECCCCCCCEEEECCCCCCCCCCCEEHHHCCCCCCCCCHHHHHHHHCCCCCCEEEEEEEE ADMPPKGGINKEVGPVLVRYDKWSSGEPVQRYQLALPWRLDAKPIFDLIGLTVEGRYLFG CCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEECCEECCCCHHHHHHCEEECCEEEEE VEPAGIVHVYDKQNGHELGVIKPGAEVGHASGWVDVPFGISAHRRENGEYLIFVEEDARG CCCCCEEEEEECCCCCEEEEECCCHHCCCCCCEEECCCCCCCEECCCCCEEEEEECCCCC KVMMYRWTPRSTEATQP CEEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA