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The map label for this gene is rfbE [H]

Identifier: 238024271

GI number: 238024271

Start: 1035846

End: 1037312

Strand: Direct

Name: rfbE [H]

Synonym: bglu_2g08540

Alternate gene names: 238024271

Gene position: 1035846-1037312 (Clockwise)

Preceding gene: 238024270

Following gene: 238024272

Centisome position: 36.64

GC content: 68.64

Gene sequence:

>1467_bases
ATGGATAAGCGAATCCTGAAGAACGTCGCGGTGAATTTCGTCGGCCTGATCCTGCCGACCTTCGTGTCGCTGGTGACGGT
GCCGGCCTACATCCACACGCTCGGGGTGGACCGCTACGGCGTGGTGAGCCTGGTGTGGACGCTGATCGGCTACTTCGGCA
TCCTCGATCTCGGCATGAGCATGGCCGCACAGAACCAGATCTCGAAGGCGCTCGCGAGCGGCGACCCCCAGCAGTGCGAG
CGCGTGTTCTGGAGCGCCTGCTGGCTGAACCTTGCCACCGGCATCGCGGGCGGCCTGCTGATCTACTTCGGCGCGTTCAT
CTACACCTCGTACTTCACCAAGGTCTCGGCCGAACTGCAGCACGAGGTTTATCGCGCGCTGCCGTGGCTCGCCTGCGCGA
TTCCGATCGCGAACGTGTCGTGGGTGTTCTCCGGCGCGATCAACGGCGCCGAACGCTTCGGCGTCTACAACGCGAACCAG
ACGTTCGGCACCTTCCTGTTCCAGCTGCTGCCGCTGTTCGCGGCCTGGCTGATCGCGCCGACGCTGCCCGCGGTGCTGGC
CGCCGCGGTGCTGGCGCGGCTGATCGCGGCGGTCCTGCTCGGCCGCGCGAGCCTGCGCGTGCTGAACATCCGGCGCGTCG
CGCCGCCGCGCTGGCGCACCGCCAGGGAGCTGTTCACGTTCGGCGGCTGGATGCTGATCGCCAGCACGGCGACCATGGTG
GCCGATTCGCTCGACCGCGTGATCCTCGGCGCGCATCTGGGCGCGCGCTACGTGACCTACTACACGGTGCCGCAGAACCT
CGTCACGCGGCTCAACATGCTGCCGAACGCGGTGGTGCGCACGCTGTTCCCGCGGCTGTCGGCGGTCGATCGCGACCATG
CCGACCACCTCGTGCGGCAGTCGCTCGAATTCCTCAACGGCGTGTTCACGCCGGTGGCGATCGTCGCGATCTTCGCGCTG
CAGCCGTTCCTCGAACTCTGGGTCGGCCACGATCTCGCCACCCAGTCCTCGCCGGTCGGCCGCGTGCTCGTGATCGGCAT
CTGGCTGGTGGGGCAGGCCGGCGTGATGCGAATCCTGATCCAGTCGCAGGTCAATCCGGCCCGCGCCGCCCTGGCGGGGC
TCGTCGAGCTGCCGTTCTTCGTCGGCGGGCTCTGGTTCGGCATCACGCACTTCGGCCTGATCGGCGCGGCGGTGGTGGTG
GTCGCGCGCGCGCTCATCGACTACGGCGTATTGCTGGTGCTGGCGTCGGTGAAGCGCCGGCCGATCGTGGCCGACATGGC
CGCCCACCTGGCCTTCTTGTTCGGCAGTCTCGCGCTGGCCTGGACGACGCCGGCCCTGGCGCAGGCCGTCGCGCTCTGCG
CACTCGTCGCCGCGCTCAACATCGCGTGGTCCTTCGTGATGACGCCCGGCCTGCGCGCGCTCGCGCGCGGCGTGCTGGGC
CGCCTGATTCCCGGGAAAAGCATATGA

Upstream 100 bases:

>100_bases
GGTGATGATGTACCGGTGGACGCCGCGCTCGACGGAGGCGACCCAGCCATGACGATCGAGATGACGGCGGTGAACGCGCG
GCGCGGCGCAAGGCGGCGCC

Downstream 100 bases:

>100_bases
AAGGCGAACTCGTAGAACGCTCCGTGCCGTCGTTCGCACGGCAGCACCAGACGGCCGGCACCGCGCGCGCGGCCGGCAAG
CCGTCGGGCAAGCCGCTGCG

Product: polysaccharide biosynthesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 488; Mature: 488

Protein sequence:

>488_residues
MDKRILKNVAVNFVGLILPTFVSLVTVPAYIHTLGVDRYGVVSLVWTLIGYFGILDLGMSMAAQNQISKALASGDPQQCE
RVFWSACWLNLATGIAGGLLIYFGAFIYTSYFTKVSAELQHEVYRALPWLACAIPIANVSWVFSGAINGAERFGVYNANQ
TFGTFLFQLLPLFAAWLIAPTLPAVLAAAVLARLIAAVLLGRASLRVLNIRRVAPPRWRTARELFTFGGWMLIASTATMV
ADSLDRVILGAHLGARYVTYYTVPQNLVTRLNMLPNAVVRTLFPRLSAVDRDHADHLVRQSLEFLNGVFTPVAIVAIFAL
QPFLELWVGHDLATQSSPVGRVLVIGIWLVGQAGVMRILIQSQVNPARAALAGLVELPFFVGGLWFGITHFGLIGAAVVV
VARALIDYGVLLVLASVKRRPIVADMAAHLAFLFGSLALAWTTPALAQAVALCALVAALNIAWSFVMTPGLRALARGVLG
RLIPGKSI

Sequences:

>Translated_488_residues
MDKRILKNVAVNFVGLILPTFVSLVTVPAYIHTLGVDRYGVVSLVWTLIGYFGILDLGMSMAAQNQISKALASGDPQQCE
RVFWSACWLNLATGIAGGLLIYFGAFIYTSYFTKVSAELQHEVYRALPWLACAIPIANVSWVFSGAINGAERFGVYNANQ
TFGTFLFQLLPLFAAWLIAPTLPAVLAAAVLARLIAAVLLGRASLRVLNIRRVAPPRWRTARELFTFGGWMLIASTATMV
ADSLDRVILGAHLGARYVTYYTVPQNLVTRLNMLPNAVVRTLFPRLSAVDRDHADHLVRQSLEFLNGVFTPVAIVAIFAL
QPFLELWVGHDLATQSSPVGRVLVIGIWLVGQAGVMRILIQSQVNPARAALAGLVELPFFVGGLWFGITHFGLIGAAVVV
VARALIDYGVLLVLASVKRRPIVADMAAHLAFLFGSLALAWTTPALAQAVALCALVAALNIAWSFVMTPGLRALARGVLG
RLIPGKSI
>Mature_488_residues
MDKRILKNVAVNFVGLILPTFVSLVTVPAYIHTLGVDRYGVVSLVWTLIGYFGILDLGMSMAAQNQISKALASGDPQQCE
RVFWSACWLNLATGIAGGLLIYFGAFIYTSYFTKVSAELQHEVYRALPWLACAIPIANVSWVFSGAINGAERFGVYNANQ
TFGTFLFQLLPLFAAWLIAPTLPAVLAAAVLARLIAAVLLGRASLRVLNIRRVAPPRWRTARELFTFGGWMLIASTATMV
ADSLDRVILGAHLGARYVTYYTVPQNLVTRLNMLPNAVVRTLFPRLSAVDRDHADHLVRQSLEFLNGVFTPVAIVAIFAL
QPFLELWVGHDLATQSSPVGRVLVIGIWLVGQAGVMRILIQSQVNPARAALAGLVELPFFVGGLWFGITHFGLIGAAVVV
VARALIDYGVLLVLASVKRRPIVADMAAHLAFLFGSLALAWTTPALAQAVALCALVAALNIAWSFVMTPGLRALARGVLG
RLIPGKSI

Specific function: Could be an O-antigen transporter [H]

COG id: COG2244

COG function: function code R; Membrane protein involved in the export of O-antigen and teichoic acid

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002797 [H]

Pfam domain/function: PF01943 Polysacc_synt [H]

EC number: NA

Molecular weight: Translated: 52741; Mature: 52741

Theoretical pI: Translated: 10.41; Mature: 10.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HCCCCCCC
>Mature Secondary Structure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HCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7507920; 12384590; 12704152 [H]