| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
Click here to switch to the map view.
The map label for this gene is 238023842
Identifier: 238023842
GI number: 238023842
Start: 452138
End: 452428
Strand: Direct
Name: 238023842
Synonym: bglu_2g03810
Alternate gene names: NA
Gene position: 452138-452428 (Clockwise)
Preceding gene: 238023841
Following gene: 238023843
Centisome position: 15.99
GC content: 74.57
Gene sequence:
>291_bases ATGCCTGATCGCAAGCCCATCCGGACCGCTGCCGCCGCGCTCGGCGTGACCATCGACGGGCGCGCCTGCCGCGTGCCCGA GGGCGCCACCGTCGCGGCCGCGCTCGCGCTCGTGCAGGGCGTGCGCGGCACGCGCACCTCGGTCGGCGGCGCGCCGCGCA CCATGCTCTGCGGCATGGGCATCTGCCACGAATGCCGCGTGTCGGTGGACGGCCGCGCCCACGTGCTGGCCTGCCAGACG CCGTGCCGCGAGGGCATGACGATCGACACGACCTGGAACTCCCCATCATGA
Upstream 100 bases:
>100_bases CTGGCCACGGCGGAGCTGATCGCCGCCCAGCTGGCGGGCGGCGAGCCGCCGATTCCTCCCGAACCCTACAGCCCGTCCCG GCCGCTTGCCGGAGCCGCCC
Downstream 100 bases:
>100_bases AGCCGCATTACGACGTGGTGATCGTCGGCGCCGGGCCGGCAGGGCTCGCCGCCGCGCGGGCCGCCGCCGGCGAGGGCGCC AGCGTCGCGCTGCTCGACGA
Product: putative ferredoxin-containing oxidase
Products: NA
Alternate protein names: Ferredoxin-Containing Oxidase; NAD-Dependent Formate Dehydrogenase Alpha Subunit; FAD-Dependent Pyridine Nucleotide-Disulphide Oxidoreductase; Sarcosine Oxidase Subunit Alpha
Number of amino acids: Translated: 96; Mature: 95
Protein sequence:
>96_residues MPDRKPIRTAAAALGVTIDGRACRVPEGATVAAALALVQGVRGTRTSVGGAPRTMLCGMGICHECRVSVDGRAHVLACQT PCREGMTIDTTWNSPS
Sequences:
>Translated_96_residues MPDRKPIRTAAAALGVTIDGRACRVPEGATVAAALALVQGVRGTRTSVGGAPRTMLCGMGICHECRVSVDGRAHVLACQT PCREGMTIDTTWNSPS >Mature_95_residues PDRKPIRTAAAALGVTIDGRACRVPEGATVAAALALVQGVRGTRTSVGGAPRTMLCGMGICHECRVSVDGRAHVLACQTP CREGMTIDTTWNSPS
Specific function: Unknown
COG id: COG0446
COG function: function code R; Uncharacterized NAD(FAD)-dependent dehydrogenases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9935; Mature: 9803
Theoretical pI: Translated: 8.64; Mature: 8.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.2 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 10.4 %Cys+Met (Translated Protein) 6.3 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 9.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDRKPIRTAAAALGVTIDGRACRVPEGATVAAALALVQGVRGTRTSVGGAPRTMLCGMG CCCCCHHHHHHHHHCEEECCCEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCC ICHECRVSVDGRAHVLACQTPCREGMTIDTTWNSPS CCCEEEEECCCCEEEEEECCCCCCCCEEEECCCCCC >Mature Secondary Structure PDRKPIRTAAAALGVTIDGRACRVPEGATVAAALALVQGVRGTRTSVGGAPRTMLCGMG CCCCHHHHHHHHHCEEECCCEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCC ICHECRVSVDGRAHVLACQTPCREGMTIDTTWNSPS CCCEEEEECCCCEEEEEECCCCCCCCEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA