| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is ooxA [H]
Identifier: 238023843
GI number: 238023843
Start: 452425
End: 453702
Strand: Direct
Name: ooxA [H]
Synonym: bglu_2g03820
Alternate gene names: 238023843
Gene position: 452425-453702 (Clockwise)
Preceding gene: 238023842
Following gene: 238023844
Centisome position: 16.0
GC content: 78.95
Gene sequence:
>1278_bases ATGAAGCCGCATTACGACGTGGTGATCGTCGGCGCCGGGCCGGCAGGGCTCGCCGCCGCGCGGGCCGCCGCCGGCGAGGG CGCCAGCGTCGCGCTGCTCGACGACAATCCGCATCCCGGCGGCCAGGTCTGGCGCCAGGGGCCGGTGTTTCCGGCCGCCG CGCCGCTCGTGGAGGCGCTCGGCGCGCTGCGCGCGAGCGGCGTCGAGCCGGTCTCGGGCGCCCGCGTGGTGGCCGCGCTG CCGGAGCGCGGCCTGCTCGTCGAGACCGCCGCGGGCGGCGCGACGCTGCGCTACGGGCGCCTGGTGGTGGCCACCGGCGC GCGCGAGCTGCTGCTGCCGTTTCCCGGCTGGACGCTGCCCGGCGTGACGGGCGCGGGCGGCCTGCAGGCGCTGATCAAGA GCGGCGTGCCGGTGCGCGGCGAGCGGATCGTGATCGCCGGCAGCGGCCCGCTGCTGGTCGCCGCCTACGCGACGGCGCGC GCGGCCGGCGCGCGCGTGGCCGCGGTGCTCGAACAGGCGCCGGCGCGCGCCGTGCGCCGCTTCGGGCTGTCGCTGCTGGC CACGCCGTCCAAGCTCTGGCAGGCCGCGAGGCTCACGCGCGGTTTCGCCGGCAGCGCATACCTGACCGGCAGCGTGGTGC GCGCCGCGCACGGCGAGGCGCGCGTGGAAGCCGTGCGGATCGAGACGGACGGCGGCGGCTCGCGCGTGATCGAATGCGAC CGGCTCGCCTGCGGCTACGGGCTGTTGCCGAACCTGACGCTGGCGCGCGCGCTCGGCTGCGAGGTGCGCGGCGGCGCGGT GCTGGTCGATGCGCGGCAGCGCACCTCGCTCGACGCGGTGTACGCGGCCGGCGAGAGCACCGGCATCGGCGGGATGGAGC TGGCACGCGTCGAGGGCACCATCGCCGGGCTCGCGGCGGCCGACGGCGCCGCAGATGCCGCGCGCTTCGCAGCGCTCGTG CGCGAGCGCGAGGTCTGGCGCGGGTTCGCGGCGCGCGTCGCGGCGGCGTTCGCGCTCGGCGACGCGGCGCGCGCGCTGCC GCCCGACGACACGCTGCTGTGCCGCTGCGAGGACGTGACGATCGGCGCCGCGCGCGCCCATGCCGACGCGCGCGACGCCA AGCTGCTGACGCGCTGCGGGATGGGCGCTTGCCAGGGCCGCGTCTGCGGCGCGGCGGCCGGCGTGCTGCTCGATTGGCAG GAAGCCGTGCCGCGGCCGCCGTTCGCGCCGGTGCGGGTCGCCACGCTGGCCGCGCTCGCCGGCGAGGCGGTCCGGTAG
Upstream 100 bases:
>100_bases ACGAATGCCGCGTGTCGGTGGACGGCCGCGCCCACGTGCTGGCCTGCCAGACGCCGTGCCGCGAGGGCATGACGATCGAC ACGACCTGGAACTCCCCATC
Downstream 100 bases:
>100_bases CGCGGGCCCGGCGCAGCGTCGAGCGCACGCTCCGATAGAATCGACGCACCCGCCGCCCGCACTCCGCCACCGCGATGACG CCTCCTGCCGCTCCCTCCGC
Product: oxidoreductase
Products: NA
Alternate protein names: Octopine oxidase subunit A [H]
Number of amino acids: Translated: 425; Mature: 425
Protein sequence:
>425_residues MKPHYDVVIVGAGPAGLAAARAAAGEGASVALLDDNPHPGGQVWRQGPVFPAAAPLVEALGALRASGVEPVSGARVVAAL PERGLLVETAAGGATLRYGRLVVATGARELLLPFPGWTLPGVTGAGGLQALIKSGVPVRGERIVIAGSGPLLVAAYATAR AAGARVAAVLEQAPARAVRRFGLSLLATPSKLWQAARLTRGFAGSAYLTGSVVRAAHGEARVEAVRIETDGGGSRVIECD RLACGYGLLPNLTLARALGCEVRGGAVLVDARQRTSLDAVYAAGESTGIGGMELARVEGTIAGLAAADGAADAARFAALV REREVWRGFAARVAAAFALGDAARALPPDDTLLCRCEDVTIGAARAHADARDAKLLTRCGMGACQGRVCGAAAGVLLDWQ EAVPRPPFAPVRVATLAALAGEAVR
Sequences:
>Translated_425_residues MKPHYDVVIVGAGPAGLAAARAAAGEGASVALLDDNPHPGGQVWRQGPVFPAAAPLVEALGALRASGVEPVSGARVVAAL PERGLLVETAAGGATLRYGRLVVATGARELLLPFPGWTLPGVTGAGGLQALIKSGVPVRGERIVIAGSGPLLVAAYATAR AAGARVAAVLEQAPARAVRRFGLSLLATPSKLWQAARLTRGFAGSAYLTGSVVRAAHGEARVEAVRIETDGGGSRVIECD RLACGYGLLPNLTLARALGCEVRGGAVLVDARQRTSLDAVYAAGESTGIGGMELARVEGTIAGLAAADGAADAARFAALV REREVWRGFAARVAAAFALGDAARALPPDDTLLCRCEDVTIGAARAHADARDAKLLTRCGMGACQGRVCGAAAGVLLDWQ EAVPRPPFAPVRVATLAALAGEAVR >Mature_425_residues MKPHYDVVIVGAGPAGLAAARAAAGEGASVALLDDNPHPGGQVWRQGPVFPAAAPLVEALGALRASGVEPVSGARVVAAL PERGLLVETAAGGATLRYGRLVVATGARELLLPFPGWTLPGVTGAGGLQALIKSGVPVRGERIVIAGSGPLLVAAYATAR AAGARVAAVLEQAPARAVRRFGLSLLATPSKLWQAARLTRGFAGSAYLTGSVVRAAHGEARVEAVRIETDGGGSRVIECD RLACGYGLLPNLTLARALGCEVRGGAVLVDARQRTSLDAVYAAGESTGIGGMELARVEGTIAGLAAADGAADAARFAALV REREVWRGFAARVAAAFALGDAARALPPDDTLLCRCEDVTIGAARAHADARDAKLLTRCGMGACQGRVCGAAAGVLLDWQ EAVPRPPFAPVRVATLAALAGEAVR
Specific function: Oxidative cleavage of octopine into L-arginine and pyruvate [H]
COG id: COG0446
COG function: function code R; Uncharacterized NAD(FAD)-dependent dehydrogenases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To T-protein and to dimethylglycine dehydrogenase [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007419 - InterPro: IPR013027 - InterPro: IPR017224 - InterPro: IPR000103 [H]
Pfam domain/function: PF04324 Fer2_BFD; PF07992 Pyr_redox_2 [H]
EC number: NA
Molecular weight: Translated: 42943; Mature: 42943
Theoretical pI: Translated: 9.14; Mature: 9.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPHYDVVIVGAGPAGLAAARAAAGEGASVALLDDNPHPGGQVWRQGPVFPAAAPLVEAL CCCCCCEEEEECCCHHHHHHHHHCCCCCEEEEECCCCCCCCHHCCCCCCCCCHHHHHHHH GALRASGVEPVSGARVVAALPERGLLVETAAGGATLRYGRLVVATGARELLLPFPGWTLP HHHHHCCCCCCCCCEEEEECCCCCEEEEECCCCCEEEECEEEEECCCCEEEEECCCCCCC GVTGAGGLQALIKSGVPVRGERIVIAGSGPLLVAAYATARAAGARVAAVLEQAPARAVRR CCCCCHHHHHHHHCCCCCCCCEEEEECCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHH FGLSLLATPSKLWQAARLTRGFAGSAYLTGSVVRAAHGEARVEAVRIETDGGGSRVIECD HCHHHCCCHHHHHHHHHHHCCCCCCEEEHHHHHHHCCCCCEEEEEEEEECCCCCEEEEEC RLACGYGLLPNLTLARALGCEVRGGAVLVDARQRTSLDAVYAAGESTGIGGMELARVEGT CEECCCCCCCCHHHHHHHCCEECCCEEEEECCCCCCCHHEEECCCCCCCCCEEEEEECCC IAGLAAADGAADAARFAALVREREVWRGFAARVAAAFALGDAARALPPDDTLLCRCEDVT EEEHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCEEEEECCCE IGAARAHADARDAKLLTRCGMGACQGRVCGAAAGVLLDWQEAVPRPPFAPVRVATLAALA EEHHHHCCCHHHHHHHHHCCCCCCCCCHHHHHHHHEEEHHHHCCCCCCCCHHHHHHHHHH GEAVR HCCCC >Mature Secondary Structure MKPHYDVVIVGAGPAGLAAARAAAGEGASVALLDDNPHPGGQVWRQGPVFPAAAPLVEAL CCCCCCEEEEECCCHHHHHHHHHCCCCCEEEEECCCCCCCCHHCCCCCCCCCHHHHHHHH GALRASGVEPVSGARVVAALPERGLLVETAAGGATLRYGRLVVATGARELLLPFPGWTLP HHHHHCCCCCCCCCEEEEECCCCCEEEEECCCCCEEEECEEEEECCCCEEEEECCCCCCC GVTGAGGLQALIKSGVPVRGERIVIAGSGPLLVAAYATARAAGARVAAVLEQAPARAVRR CCCCCHHHHHHHHCCCCCCCCEEEEECCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHH FGLSLLATPSKLWQAARLTRGFAGSAYLTGSVVRAAHGEARVEAVRIETDGGGSRVIECD HCHHHCCCHHHHHHHHHHHCCCCCCEEEHHHHHHHCCCCCEEEEEEEEECCCCCEEEEEC RLACGYGLLPNLTLARALGCEVRGGAVLVDARQRTSLDAVYAAGESTGIGGMELARVEGT CEECCCCCCCCHHHHHHHCCEECCCEEEEECCCCCCCHHEEECCCCCCCCCEEEEEECCC IAGLAAADGAADAARFAALVREREVWRGFAARVAAAFALGDAARALPPDDTLLCRCEDVT EEEHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCEEEEECCCE IGAARAHADARDAKLLTRCGMGACQGRVCGAAAGVLLDWQEAVPRPPFAPVRVATLAALA EEHHHHCCCHHHHHHHHHCCCCCCCCCHHHHHHHHEEEHHHHCCCCCCCCHHHHHHHHHH GEAVR HCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA