| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238023812
Identifier: 238023812
GI number: 238023812
Start: 412366
End: 413430
Strand: Direct
Name: 238023812
Synonym: bglu_2g03500
Alternate gene names: NA
Gene position: 412366-413430 (Clockwise)
Preceding gene: 238023811
Following gene: 238023815
Centisome position: 14.58
GC content: 68.36
Gene sequence:
>1065_bases ATGCTGACTCGCTTGCTGTCTACCCTGGCCGTTTTCTCGTTCGCCGCGTGCACCACGCCGCTGTCCGCCGCGCAGGACGC GGCTTCGCCCGACGCTGCCGGCCACCTTGCCGGCACGCGTGCGCCGAAGGTGATGATCGTCACGATGTTCGGCCCGGAAG GGCAGGCCTGGACCGACCGGCTCGGCCCATGGACGCAGGTGAAGGTGCCGGGGCTCTCGCCCGACTATCCGAACGTGCAA TGCAACCGCGAGGACGTCTGCGTCGTGACGACGGGCATGGGATACGCGAACGCGGCCGCCACCATCATGGCGCTGACGTT CTCGCCGCAATTCGACCTGCGCCGTACCTATTTCCTGATCTCCGGCATCGCCGGCGTCGATCCCGCGCAAGGCACGGTCG GCTCGGCCGCCTGGTCGCATTACCTGGTCGATTTCAGCCTGCAGTGGGAGCTCGACGCGCGCGAAATCCCGGCCGGCTGG CACACCGGCTATCTCGGCATCAACACCAAGGACCCCAGCCAGAAGCCGCCGCTCGACTACAAGACCGAGGTGTTCGAGCT CAATCCGAAGCTGACCGACGCGGCCTATGCACTGTCGCGCAACGTGGTGCTGGCCGACAACGCGCAGGCCCAGGCCGCGC GCGCGAAATTCGACACGGCGCCGGCCAACCGGCCGCCGGCGGTGGTGCGCTGCGACACCTCGTCGGGCAACACCTGGTTT TCCGGCACCAAGCTCGGCGAGCGCGCGCGCGAGTGGACGAAGATCCTGACCGACGGCAAGGGCACTTACTGCATGACCGC GCAGGAGGACAACGCGACCTATGAGGCGCTCACGCGGGCCGCCGCCACGCAGCGCGTCGATCTCTCGCGCGTGGCGCTGC TGCGCACGGGTTCGGACTTCGACCGGCCGTATCCGGGCCAGACCAGCGTCGACAACCTGCTGAACTATGCCGACCAGGGC GGCTTCGCGATCGCCACCGAGAACCTCTATCGCGCCGGCAACCCGCTCGTGCAGGACATCGTCAAGCACTGGGGCGAATG GCGCGCGGGCGTGCCGACGCGCTGA
Upstream 100 bases:
>100_bases CGGCGGATTCGCGGCGCGCGCGGCCGGAGGGCCTGGCCGCGCGCGCAAGTCCCGCAGCCTTCGGGAGCCGTTCTCACCAC TTCATTCAAAAGGAACGACG
Downstream 100 bases:
>100_bases GCGCATCCGGCCGGGCGCGCGCGGCGCGCCATGCCCCGCTGCAGCCGGCGGCCGCGGCATCGGAAGAGGCGGCGGCCGCC GGTTTCGGTTTCAGCGCCGA
Product: Purine nucleoside permease
Products: NA
Alternate protein names: Purine Nucleoside Permease Protein; Purine Nucleoside Permease Family Protein; CNT Family Concentrative Nucleoside/H+ Anitporter; Purine Nucleoside Permease Family; Purine Nucleoside Permease-Like Protein; NUP-Family Purine Nucleoside Permease; Purine Nucleoside Transporter; Inosine/Uridine-Preferring Nucleoside Hydrolase; Lipoprotein
Number of amino acids: Translated: 354; Mature: 354
Protein sequence:
>354_residues MLTRLLSTLAVFSFAACTTPLSAAQDAASPDAAGHLAGTRAPKVMIVTMFGPEGQAWTDRLGPWTQVKVPGLSPDYPNVQ CNREDVCVVTTGMGYANAAATIMALTFSPQFDLRRTYFLISGIAGVDPAQGTVGSAAWSHYLVDFSLQWELDAREIPAGW HTGYLGINTKDPSQKPPLDYKTEVFELNPKLTDAAYALSRNVVLADNAQAQAARAKFDTAPANRPPAVVRCDTSSGNTWF SGTKLGERAREWTKILTDGKGTYCMTAQEDNATYEALTRAAATQRVDLSRVALLRTGSDFDRPYPGQTSVDNLLNYADQG GFAIATENLYRAGNPLVQDIVKHWGEWRAGVPTR
Sequences:
>Translated_354_residues MLTRLLSTLAVFSFAACTTPLSAAQDAASPDAAGHLAGTRAPKVMIVTMFGPEGQAWTDRLGPWTQVKVPGLSPDYPNVQ CNREDVCVVTTGMGYANAAATIMALTFSPQFDLRRTYFLISGIAGVDPAQGTVGSAAWSHYLVDFSLQWELDAREIPAGW HTGYLGINTKDPSQKPPLDYKTEVFELNPKLTDAAYALSRNVVLADNAQAQAARAKFDTAPANRPPAVVRCDTSSGNTWF SGTKLGERAREWTKILTDGKGTYCMTAQEDNATYEALTRAAATQRVDLSRVALLRTGSDFDRPYPGQTSVDNLLNYADQG GFAIATENLYRAGNPLVQDIVKHWGEWRAGVPTR >Mature_354_residues MLTRLLSTLAVFSFAACTTPLSAAQDAASPDAAGHLAGTRAPKVMIVTMFGPEGQAWTDRLGPWTQVKVPGLSPDYPNVQ CNREDVCVVTTGMGYANAAATIMALTFSPQFDLRRTYFLISGIAGVDPAQGTVGSAAWSHYLVDFSLQWELDAREIPAGW HTGYLGINTKDPSQKPPLDYKTEVFELNPKLTDAAYALSRNVVLADNAQAQAARAKFDTAPANRPPAVVRCDTSSGNTWF SGTKLGERAREWTKILTDGKGTYCMTAQEDNATYEALTRAAATQRVDLSRVALLRTGSDFDRPYPGQTSVDNLLNYADQG GFAIATENLYRAGNPLVQDIVKHWGEWRAGVPTR
Specific function: Unknown
COG id: COG5042
COG function: function code F; Purine nucleoside permease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38361; Mature: 38361
Theoretical pI: Translated: 6.14; Mature: 6.14
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTRLLSTLAVFSFAACTTPLSAAQDAASPDAAGHLAGTRAPKVMIVTMFGPEGQAWTDR CHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHC LGPWTQVKVPGLSPDYPNVQCNREDVCVVTTGMGYANAAATIMALTFSPQFDLRRTYFLI CCCCEEEEECCCCCCCCCCEECCCCEEEEEECCCCHHHCEEEEEEEECCCCCCHHEEEEE SGIAGVDPAQGTVGSAAWSHYLVDFSLQWELDAREIPAGWHTGYLGINTKDPSQKPPLDY ECCCCCCCCCCCCCHHHHEEEEEEEEEEEEECHHHCCCCCCCCEEECCCCCCCCCCCCCC KTEVFELNPKLTDAAYALSRNVVLADNAQAQAARAKFDTAPANRPPAVVRCDTSSGNTWF CCEEEEECCCHHHHHHHHHCCEEEECCCHHHHHHHHCCCCCCCCCCEEEEEECCCCCEEE SGTKLGERAREWTKILTDGKGTYCMTAQEDNATYEALTRAAATQRVDLSRVALLRTGSDF CCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHCCHHHEEEEECCCCC DRPYPGQTSVDNLLNYADQGGFAIATENLYRAGNPLVQDIVKHWGEWRAGVPTR CCCCCCCCCHHHHHHHHCCCCEEEEECCHHHCCCHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MLTRLLSTLAVFSFAACTTPLSAAQDAASPDAAGHLAGTRAPKVMIVTMFGPEGQAWTDR CHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHC LGPWTQVKVPGLSPDYPNVQCNREDVCVVTTGMGYANAAATIMALTFSPQFDLRRTYFLI CCCCEEEEECCCCCCCCCCEECCCCEEEEEECCCCHHHCEEEEEEEECCCCCCHHEEEEE SGIAGVDPAQGTVGSAAWSHYLVDFSLQWELDAREIPAGWHTGYLGINTKDPSQKPPLDY ECCCCCCCCCCCCCHHHHEEEEEEEEEEEEECHHHCCCCCCCCEEECCCCCCCCCCCCCC KTEVFELNPKLTDAAYALSRNVVLADNAQAQAARAKFDTAPANRPPAVVRCDTSSGNTWF CCEEEEECCCHHHHHHHHHCCEEEECCCHHHHHHHHCCCCCCCCCCEEEEEECCCCCEEE SGTKLGERAREWTKILTDGKGTYCMTAQEDNATYEALTRAAATQRVDLSRVALLRTGSDF CCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHCCHHHEEEEECCCCC DRPYPGQTSVDNLLNYADQGGFAIATENLYRAGNPLVQDIVKHWGEWRAGVPTR CCCCCCCCCHHHHHHHHCCCCEEEEECCHHHCCCHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA