| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is iorA [H]
Identifier: 238023784
GI number: 238023784
Start: 378545
End: 379000
Strand: Direct
Name: iorA [H]
Synonym: bglu_2g03190
Alternate gene names: 238023784
Gene position: 378545-379000 (Clockwise)
Preceding gene: 238023781
Following gene: 238023785
Centisome position: 13.39
GC content: 70.18
Gene sequence:
>456_bases ATGACCACGTTGAACATCAATGGCGTGACGCACAGCGTCGACGCGCCCGACGACATGCCTCTCCTCTGGGTGCTGCGCGA CCTCGTCGGTCTGACCGGCACGAAGTTCGGCTGCGGCATCGCCCAGTGCGGCGCCTGCACCGTCCACCTGGACGGCGAGG CCGCGCGCTCGTGCGTGCTGCCGGTGGCCGCCGTGGCCGGCCGCCGGATCACGACCATCGAGGCGGTCGGTATGACGCCG GTGGGCGCGAAGGTCCAGCAGGCATGGCGCAAGCTCGACGTGGTGCAGTGCGGCTACTGCCAGTCGGGGCAGGTGATGGC GGCCGCTTCGCTGCTGGCCTCGAACCCGCACCCGAGCGACGCCGACATCGATGCGGCGATGGCGGGCAACATCTGCCGCT GCGGCACCTACAACCGGATTCGCGCAGCCATCAAGCTGGCCGCGCAGGAGGCCTGA
Upstream 100 bases:
>100_bases GGCCAAGCAAGGCGTCGATCTCGCGCCCTTCGCCGTCGATCCGCTCCAAGCCTTGCCGCGACACGCTCCAACCCTTCCCC CACCAAACCGGGAGCTTCCG
Downstream 100 bases:
>100_bases CCATGTCCTCGGGAATCATCGAAGCGAGCCGCGCCGCGCGCGCGGCCGGCGGCGACGCGACGGGCATCTCGCGGCGCCAT TTCCTGCAGGCCGGCTTCAC
Product: isoquinoline 1-oxidoreductase subunit alpha
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 151; Mature: 150
Protein sequence:
>151_residues MTTLNINGVTHSVDAPDDMPLLWVLRDLVGLTGTKFGCGIAQCGACTVHLDGEAARSCVLPVAAVAGRRITTIEAVGMTP VGAKVQQAWRKLDVVQCGYCQSGQVMAAASLLASNPHPSDADIDAAMAGNICRCGTYNRIRAAIKLAAQEA
Sequences:
>Translated_151_residues MTTLNINGVTHSVDAPDDMPLLWVLRDLVGLTGTKFGCGIAQCGACTVHLDGEAARSCVLPVAAVAGRRITTIEAVGMTP VGAKVQQAWRKLDVVQCGYCQSGQVMAAASLLASNPHPSDADIDAAMAGNICRCGTYNRIRAAIKLAAQEA >Mature_150_residues TTLNINGVTHSVDAPDDMPLLWVLRDLVGLTGTKFGCGIAQCGACTVHLDGEAARSCVLPVAAVAGRRITTIEAVGMTPV GAKVQQAWRKLDVVQCGYCQSGQVMAAASLLASNPHPSDADIDAAMAGNICRCGTYNRIRAAIKLAAQEA
Specific function: Specific towards N-containing N-heterocyclic substrates, including isoquinoline, isoquinolin-5-ol, phthalazine and quinazoline [H]
COG id: COG2080
COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]
Homologues:
Organism=Homo sapiens, GI91823271, Length=147, Percent_Identity=35.3741496598639, Blast_Score=69, Evalue=1e-12, Organism=Homo sapiens, GI71773480, Length=107, Percent_Identity=32.7102803738318, Blast_Score=69, Evalue=2e-12, Organism=Escherichia coli, GI1786480, Length=163, Percent_Identity=38.6503067484663, Blast_Score=101, Evalue=2e-23, Organism=Escherichia coli, GI1789232, Length=138, Percent_Identity=39.1304347826087, Blast_Score=90, Evalue=8e-20, Organism=Caenorhabditis elegans, GI17540638, Length=140, Percent_Identity=40.7142857142857, Blast_Score=105, Evalue=1e-23, Organism=Caenorhabditis elegans, GI17539860, Length=152, Percent_Identity=34.2105263157895, Blast_Score=91, Evalue=3e-19, Organism=Caenorhabditis elegans, GI32566215, Length=159, Percent_Identity=32.0754716981132, Blast_Score=89, Evalue=8e-19, Organism=Drosophila melanogaster, GI17737937, Length=157, Percent_Identity=36.3057324840764, Blast_Score=89, Evalue=8e-19, Organism=Drosophila melanogaster, GI24647193, Length=157, Percent_Identity=35.6687898089172, Blast_Score=86, Evalue=1e-17, Organism=Drosophila melanogaster, GI24647199, Length=153, Percent_Identity=34.640522875817, Blast_Score=77, Evalue=4e-15, Organism=Drosophila melanogaster, GI24647201, Length=153, Percent_Identity=33.3333333333333, Blast_Score=74, Evalue=5e-14, Organism=Drosophila melanogaster, GI24647197, Length=157, Percent_Identity=31.8471337579618, Blast_Score=69, Evalue=1e-12, Organism=Drosophila melanogaster, GI24647195, Length=157, Percent_Identity=31.8471337579618, Blast_Score=69, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002888 - InterPro: IPR006058 - InterPro: IPR012675 - InterPro: IPR001041 [H]
Pfam domain/function: PF00111 Fer2; PF01799 Fer2_2 [H]
EC number: =1.3.99.16 [H]
Molecular weight: Translated: 15681; Mature: 15550
Theoretical pI: Translated: 7.24; Mature: 7.24
Prosite motif: PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.3 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 8.6 %Cys+Met (Translated Protein) 5.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 8.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTLNINGVTHSVDAPDDMPLLWVLRDLVGLTGTKFGCGIAQCGACTVHLDGEAARSCVL CEEEECCCEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCHHHHHHHH PVAAVAGRRITTIEAVGMTPVGAKVQQAWRKLDVVQCGYCQSGQVMAAASLLASNPHPSD HHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHCCEECCCCCCCCHHHHHHHHHCCCCCCC ADIDAAMAGNICRCGTYNRIRAAIKLAAQEA CCCHHHHCCCEEECCCHHHHHHHHHHHHCCC >Mature Secondary Structure TTLNINGVTHSVDAPDDMPLLWVLRDLVGLTGTKFGCGIAQCGACTVHLDGEAARSCVL EEEECCCEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCHHHHHHHH PVAAVAGRRITTIEAVGMTPVGAKVQQAWRKLDVVQCGYCQSGQVMAAASLLASNPHPSD HHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHCCEECCCCCCCCHHHHHHHHHCCCCCCC ADIDAAMAGNICRCGTYNRIRAAIKLAAQEA CCCHHHHCCCEEECCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7782304; 8157655 [H]