| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238023781
Identifier: 238023781
GI number: 238023781
Start: 368182
End: 369900
Strand: Direct
Name: 238023781
Synonym: bglu_2g03150
Alternate gene names: NA
Gene position: 368182-369900 (Clockwise)
Preceding gene: 238023780
Following gene: 238023784
Centisome position: 13.02
GC content: 69.46
Gene sequence:
>1719_bases ATGCCGCTCCGTCTGAATGCCGTGTCTGTCGTCTCATGTGGTCTGGGCTGGCTGGTCGCGATCGTGGCGGCGACGGCGGG GCCAGGCTGCGCGTTCGCGGCGCAGCCGGCCGGGCCGGCCGTGGCAGCGCCGGCCGCCGCCTCGGCGGTCGAGCCCGGGC GGGCAGCCGGCACGGCGCCGCCCGCCCGCGCCGCCACCGCACCGGCTTCGCAGGCTCACGCCGTGCCTCGCGCCGCCGCG CCGGACGCGCAGCGGCCCGACGACGCGCATCCGGTGCGAAACGATGCCGCCTTCGTGCCGGTTCCGGCCGAGACCGCGTC GGTCACTCGCCATTCGATCCGCCTCGACGGCCGCACGCTCGACTACACCGCGACGGCCGGCAACCTGCTGCTGCGCGACG ACGCCGGGCAGGCCACGGCCAGCGTGTTCTATGTCGCCTATACCGCCAACGGCCGGCGGCCCGGCGAGCGCCCCGTGACG TTCCTGTTCAACGGTGGACCGGGTGCGGGCAGCGTGTTCCTGATGATGGGCTCGTTCGGCCCGAAGCGGGCGCGCACGGC AAGCCCGGCCATCAGCGCGCCGGCGCCCTACACGCTCGCCGACAATCCCGACAGCCTGCTCGGGCAGACCGATCTGGTGT TCATCGATGCGGTCGGCGCCGGCTTCTCGCGCGTCGTCGGCCATGCGACGGGCAAGGCGTTCTGGGGCGTCGACGCTGAT CTCGACGCGTTCGATCATTTCATCGAGCGCTATCTGACCGTCAATCAGCGCTGGAATTCGCCGAAGTATCTGCTCGGCGA GTCATATGGCACCGCGCGGGCCGCGATGCTCGCCTATCGCCTGAACCAGAGCGATATCGCGCTGAACGGTGTGATCCTGA TGTCGTCCGTGCTCGATTCGGCGGCGTTCTCGCCCGGCTCCGATTTCGAGAGCGAGAGCTACCTGCCGACCTATGCGGCG ATCGCCTGGTATCACGACCGGCTGCGGCCGAAGCCGCCGAGCCTGCCCGACTTTCTCGACGAGGTGCGGGCCTTCGCGCG CGGCCCGTATGAGCAGGCGCTCGCGCAGGGCGACGCATTGCCGGATGCCGAGCGCGACGCGATCGCCGCGCGGATCGCGC AATACACGGGCATCGATGCGCAATACGTCAAGGCGGCGAGATTGCGGGTCGGGCCGTCGCGCTTTCGCAAGCAGTTGCTG CGCGACGAGTCGCGCAGCCTCGGCCGCTACGATGCGCGCGTCGAGGGCATCGATTACGACGACGCCGGCGAGCATCCCGA TTTCGATGCCTCGGCGGCGAGCATTTCGAGCGTGTTCGAGGCGGCGCTGCATGAGCATCTCGCGAACGATCTCGATTACC GGCCGGCCGACCGCTATCGCGTGTTCAACGACGCGGCGCTGATGCAGTGGGACTGGAAGCATCGCGAGTGGTGGGGCGAG CGGCTGGCCGTGCCCTATGCAGCCGGGGATCTGGCCGAGGCGATGCGGCAGAACCCGAGGCTGCGTGTGATGTCGCTGAA CGGCTATTTCGATCTGGCGACGCCGTTCTACGCGACCGAATACGCGCTCGCGCATCTCGGCGTGGAGCGTGCGCTGCAGG CCAACGTCGAGATCCGCCACTATCCGGCCGGCCACATGATCTATCTGGACGACGCGGCGCTGCATGCGATGAAGGTCGAT CTCGCGCGTTTCTATCAGGCAGCGCCGCGTGCCGACTGA
Upstream 100 bases:
>100_bases TGCGCGAAATCGGCGAAGTGGGTCGGCCGCGTTGACGCCCATGCGCGATCTGCCGACAATTCGCAGACCTTCCGCCGGCC ATCCGCCGATCGAGATCCTC
Downstream 100 bases:
>100_bases ATGTGCCGATGAGGGCGGCGGGCTCACGGTCTTGCATGAAGGTTGACGGCGAATTCGATCATTCAAGAAACGTAAGCAAG CCTCGCGTGGCTGCCATGGT
Product: putative carboxypeptidase-like protein
Products: NA
Alternate protein names: Serine Carboxypeptidase Family Protein; Carboxypeptidase-Related Protein; Serine Carboxypeptidase; Carboxypeptidase C; Serine-Type Carboxypeptidase Family Protein; S10 Family Peptidase; Carboxypeptidase; S10 Family Carboxypeptidase; Carboxypeptidase-Like Protein; Serine Carboxypeptidase Superfamily; Peptidase S
Number of amino acids: Translated: 572; Mature: 571
Protein sequence:
>572_residues MPLRLNAVSVVSCGLGWLVAIVAATAGPGCAFAAQPAGPAVAAPAAASAVEPGRAAGTAPPARAATAPASQAHAVPRAAA PDAQRPDDAHPVRNDAAFVPVPAETASVTRHSIRLDGRTLDYTATAGNLLLRDDAGQATASVFYVAYTANGRRPGERPVT FLFNGGPGAGSVFLMMGSFGPKRARTASPAISAPAPYTLADNPDSLLGQTDLVFIDAVGAGFSRVVGHATGKAFWGVDAD LDAFDHFIERYLTVNQRWNSPKYLLGESYGTARAAMLAYRLNQSDIALNGVILMSSVLDSAAFSPGSDFESESYLPTYAA IAWYHDRLRPKPPSLPDFLDEVRAFARGPYEQALAQGDALPDAERDAIAARIAQYTGIDAQYVKAARLRVGPSRFRKQLL RDESRSLGRYDARVEGIDYDDAGEHPDFDASAASISSVFEAALHEHLANDLDYRPADRYRVFNDAALMQWDWKHREWWGE RLAVPYAAGDLAEAMRQNPRLRVMSLNGYFDLATPFYATEYALAHLGVERALQANVEIRHYPAGHMIYLDDAALHAMKVD LARFYQAAPRAD
Sequences:
>Translated_572_residues MPLRLNAVSVVSCGLGWLVAIVAATAGPGCAFAAQPAGPAVAAPAAASAVEPGRAAGTAPPARAATAPASQAHAVPRAAA PDAQRPDDAHPVRNDAAFVPVPAETASVTRHSIRLDGRTLDYTATAGNLLLRDDAGQATASVFYVAYTANGRRPGERPVT FLFNGGPGAGSVFLMMGSFGPKRARTASPAISAPAPYTLADNPDSLLGQTDLVFIDAVGAGFSRVVGHATGKAFWGVDAD LDAFDHFIERYLTVNQRWNSPKYLLGESYGTARAAMLAYRLNQSDIALNGVILMSSVLDSAAFSPGSDFESESYLPTYAA IAWYHDRLRPKPPSLPDFLDEVRAFARGPYEQALAQGDALPDAERDAIAARIAQYTGIDAQYVKAARLRVGPSRFRKQLL RDESRSLGRYDARVEGIDYDDAGEHPDFDASAASISSVFEAALHEHLANDLDYRPADRYRVFNDAALMQWDWKHREWWGE RLAVPYAAGDLAEAMRQNPRLRVMSLNGYFDLATPFYATEYALAHLGVERALQANVEIRHYPAGHMIYLDDAALHAMKVD LARFYQAAPRAD >Mature_571_residues PLRLNAVSVVSCGLGWLVAIVAATAGPGCAFAAQPAGPAVAAPAAASAVEPGRAAGTAPPARAATAPASQAHAVPRAAAP DAQRPDDAHPVRNDAAFVPVPAETASVTRHSIRLDGRTLDYTATAGNLLLRDDAGQATASVFYVAYTANGRRPGERPVTF LFNGGPGAGSVFLMMGSFGPKRARTASPAISAPAPYTLADNPDSLLGQTDLVFIDAVGAGFSRVVGHATGKAFWGVDADL DAFDHFIERYLTVNQRWNSPKYLLGESYGTARAAMLAYRLNQSDIALNGVILMSSVLDSAAFSPGSDFESESYLPTYAAI AWYHDRLRPKPPSLPDFLDEVRAFARGPYEQALAQGDALPDAERDAIAARIAQYTGIDAQYVKAARLRVGPSRFRKQLLR DESRSLGRYDARVEGIDYDDAGEHPDFDASAASISSVFEAALHEHLANDLDYRPADRYRVFNDAALMQWDWKHREWWGER LAVPYAAGDLAEAMRQNPRLRVMSLNGYFDLATPFYATEYALAHLGVERALQANVEIRHYPAGHMIYLDDAALHAMKVDL ARFYQAAPRAD
Specific function: Unknown
COG id: COG2939
COG function: function code E; Carboxypeptidase C (cathepsin A)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61622; Mature: 61491
Theoretical pI: Translated: 6.03; Mature: 6.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLRLNAVSVVSCGLGWLVAIVAATAGPGCAFAAQPAGPAVAAPAAASAVEPGRAAGTAP CCEECCHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCHHHCCCCCCCCCCCC PARAATAPASQAHAVPRAAAPDAQRPDDAHPVRNDAAFVPVPAETASVTRHSIRLDGRTL CCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHEEEEECCCEE DYTATAGNLLLRDDAGQATASVFYVAYTANGRRPGERPVTFLFNGGPGAGSVFLMMGSFG EEEECCCCEEEECCCCCCEEEEEEEEEECCCCCCCCCCEEEEEECCCCCCEEEEEECCCC PKRARTASPAISAPAPYTLADNPDSLLGQTDLVFIDAVGAGFSRVVGHATGKAFWGVDAD CCCCCCCCCCCCCCCCEEECCCCHHHHCCCCEEEEEECCCCHHHHHHCCCCCEEECCCCC LDAFDHFIERYLTVNQRWNSPKYLLGESYGTARAAMLAYRLNQSDIALNGVILMSSVLDS HHHHHHHHHHHHHHHCCCCCCCEEECCCCCHHHHHHHHHHCCCCCEEEHHHHHHHHHHHH AAFSPGSDFESESYLPTYAAIAWYHDRLRPKPPSLPDFLDEVRAFARGPYEQALAQGDAL HCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHCCCCC PDAERDAIAARIAQYTGIDAQYVKAARLRVGPSRFRKQLLRDESRSLGRYDARVEGIDYD CCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCEECCCCCC DAGEHPDFDASAASISSVFEAALHEHLANDLDYRPADRYRVFNDAALMQWDWKHREWWGE CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCEEEEECCHHHHHHHH RLAVPYAAGDLAEAMRQNPRLRVMSLNGYFDLATPFYATEYALAHLGVERALQANVEIRH HEECCCCCHHHHHHHHCCCCEEEEEECCEEECCCCHHHHHHHHHHHHHHHHHHCCCEEEE YPAGHMIYLDDAALHAMKVDLARFYQAAPRAD ECCCCEEEECCHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure PLRLNAVSVVSCGLGWLVAIVAATAGPGCAFAAQPAGPAVAAPAAASAVEPGRAAGTAP CEECCHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCHHHCCCCCCCCCCCC PARAATAPASQAHAVPRAAAPDAQRPDDAHPVRNDAAFVPVPAETASVTRHSIRLDGRTL CCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHEEEEECCCEE DYTATAGNLLLRDDAGQATASVFYVAYTANGRRPGERPVTFLFNGGPGAGSVFLMMGSFG EEEECCCCEEEECCCCCCEEEEEEEEEECCCCCCCCCCEEEEEECCCCCCEEEEEECCCC PKRARTASPAISAPAPYTLADNPDSLLGQTDLVFIDAVGAGFSRVVGHATGKAFWGVDAD CCCCCCCCCCCCCCCCEEECCCCHHHHCCCCEEEEEECCCCHHHHHHCCCCCEEECCCCC LDAFDHFIERYLTVNQRWNSPKYLLGESYGTARAAMLAYRLNQSDIALNGVILMSSVLDS HHHHHHHHHHHHHHHCCCCCCCEEECCCCCHHHHHHHHHHCCCCCEEEHHHHHHHHHHHH AAFSPGSDFESESYLPTYAAIAWYHDRLRPKPPSLPDFLDEVRAFARGPYEQALAQGDAL HCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHCCCCC PDAERDAIAARIAQYTGIDAQYVKAARLRVGPSRFRKQLLRDESRSLGRYDARVEGIDYD CCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCEECCCCCC DAGEHPDFDASAASISSVFEAALHEHLANDLDYRPADRYRVFNDAALMQWDWKHREWWGE CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCEEEEECCHHHHHHHH RLAVPYAAGDLAEAMRQNPRLRVMSLNGYFDLATPFYATEYALAHLGVERALQANVEIRH HEECCCCCHHHHHHHHCCCCEEEEEECCEEECCCCHHHHHHHHHHHHHHHHHHCCCEEEE YPAGHMIYLDDAALHAMKVDLARFYQAAPRAD ECCCCEEEECCHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA