| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
Click here to switch to the map view.
The map label for this gene is iorB [H]
Identifier: 238023785
GI number: 238023785
Start: 379003
End: 381243
Strand: Direct
Name: iorB [H]
Synonym: bglu_2g03200
Alternate gene names: 238023785
Gene position: 379003-381243 (Clockwise)
Preceding gene: 238023784
Following gene: 238023786
Centisome position: 13.4
GC content: 72.78
Gene sequence:
>2241_bases ATGTCCTCGGGAATCATCGAAGCGAGCCGCGCCGCGCGCGCGGCCGGCGGCGACGCGACGGGCATCTCGCGGCGCCATTT CCTGCAGGCCGGCTTCACGCTCGGCGCGGCGGCCGGCGGCGGCCTGCTGCTCGGTTTCGCGGTGCCGGCGGCAGGCGGGG CGACGCGCCCGTCGGTGATCGGCGGTGACGCCCCCGACCAGGCGCCGGCCGGGCTCTTTGCCCCGAACGCGTTCGTGCGC ATCGATCGCGCGGGGCAGGTCACGCTGGTGATGCCGAAGGTCGAGATGGGGCAGGGCGTCTATACGTCGATCCCGATGCT GATCGCCGAGGAGCTCGAGGTGCCGCTCGACAGCGTGGTGCTCGACCATGCGCCGGCCGACGCGAAGCGCTACGGCGACC CGCTGCTGGGCGGCGGCCAGCTGACCGGCGGCTCGACGTCGATCCGCTATGCCTGGGAGCCGATGCGCCGCGCCGGCGCC ACCGCGCGCACGCTGCTGGTGGCCGCCGCCGCGCAGCAATGGAACGTCGATCCGGCATCGTGCCGCGCGGCCAACGGCGA GGTGCTGCATGCGCCGAGCGGCCGGCGCGCGGCCTACGGCTCGCTCGTCGACGCCGCCGCGAAGCTGCCGGTGCCGGCCG AGGTTGCGCTGAAGAAGCCCGAGGCGTTCACGCTGATCGGCAAGCCGGTGAAGCGGCTCGATTCGCCCGAGAAGGTGGAC GGCACCGCGCGCTTCGGGCTCGACGTGCGGCTGCCGGGCATGCTGTATGCCGCGATCGTCAACAGCCCGGTGTTCGGCGG CACCGTCGCCAGCGTCGACGACAGCGCGGCCAAGCGCGTGCCGGGCGTGCGCCAGGTGGTGCGCGTCGACAACGCGGTGG CGGTGGTGGGCGAGCACACCTGGGCCGCCAAGCGCGGCGCCGCGGCGCTCGTGATCACGTGGCACGAAGGCGCTGGCGCC CACGTCTCGATGGACGACATCGTCGGCGACCTCGCGCGCGCGGCCGAGCGCCCCGGCGCCGTCGCGCGCAACGACGGCGA CGTGGCCAAGGCGCTCGGCGCGGCCAGCGCGCGCGTCGAGTCGGTCTATCAGCAGCCGTTCCTCGCGCACGCCACGATGG AGCCGGTCAACTGCACGGTGCACGTGCGCGGCGACGGCTGCGAGATCTGGGTCGGCACGCAGGTGCCGGGCTTCGCCATC GAGGCCGCGAAGCGCGTGACCGGCTTCGACGAGAGCCGCGTCGTGCTGCACAATCACCTGCTCGGCGGCGGCTTCGGGCG GCGGCTGGAGACCGACATGATCGCGCAGGCGCTGAAGGTCGGCAAACAGGTGGACGCGCCCGTCAAGGTGGTCTGGACGC GCGAGGAGGACATCCGTCACGACATGTACCGGCCGTATTACTACGACCGGATCTCGGCCGGCGTCGATGCCAACGGCAAG CCGGTGGCGTGGCAGCACCGCATCGCCGGCTCCTCGATCATGGCGCGCTTCGCGCCCGGCGCGGTGAAGAACGGCGTGGA CAGCGACGCGGTGGAGGTGGCCGCCGATCTGCCCTACGAGATCCCGAACCAGCGCATCGAATACGTGCGCCAGGAGCCGC GCCACGTGCCGACCGCGTTCTGGCGCGGCGTCGGCCCGACGCGCGGCGCATTCGTGGTGGAGAGCTTCATCGACGAGCTG GCGGTGCGCGCGAAGGCCGACCCGGTCGCCTACCGGCGCTCGCTGCTGGGCCGCACGCCGCGCGCGCGCGACGTGCTCGA CGTGGTCGCGCGGGCGGCCGGCTGGGGGCAGGCGGTGCCCGCCGGGCGCGGCCGCGGCGTGTCGGTGCTGCACGCGTTCG GCAGCTTCTTCAGCATGATCGCGGACGTGGCGGTGGCCGACGGCGAGGTCGTCGTCGAGCGCGTGGTCTGCGCGGTCGAT TGCGGCATGGTCGTGAATCCCGACACGGTCGAGGCGCAGATCCAGGGCGGCATCGTGTTCGGCATCACCGCCGCCCTGTA CGGCGAGATCACGATCCGGGACGGGCGAGTCGAGCAGAGCAACTTCACCGACTACCGGATGCTGCGCATCAACCAGACGC CGAAGATCGACGTGCATATCGTCAAGAGCGCGCAGGCGCCGGGCGGCATCGGCGAGCCGGGCACCTCGGCGATCGCGGCG GCGCTGGCCAACGCGATCCATGCGGCCACGGGCAAGCGCCTTTACCGGCTGCCGGTCGGCGATCAACTGAAAACGGCATG A
Upstream 100 bases:
>100_bases ACGCCGACATCGATGCGGCGATGGCGGGCAACATCTGCCGCTGCGGCACCTACAACCGGATTCGCGCAGCCATCAAGCTG GCCGCGCAGGAGGCCTGACC
Downstream 100 bases:
>100_bases GGGAGGCGGCGATGACGATTCCGAACCGGCTGCGCCGGGCATGCGGTGCGGCCGCACTGGCCGGTGCCGCGTTCGCGGCG CCGGGCGCCCATGCGGCGGC
Product: Aerobic-type carbon monoxide dehydrogenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 746; Mature: 745
Protein sequence:
>746_residues MSSGIIEASRAARAAGGDATGISRRHFLQAGFTLGAAAGGGLLLGFAVPAAGGATRPSVIGGDAPDQAPAGLFAPNAFVR IDRAGQVTLVMPKVEMGQGVYTSIPMLIAEELEVPLDSVVLDHAPADAKRYGDPLLGGGQLTGGSTSIRYAWEPMRRAGA TARTLLVAAAAQQWNVDPASCRAANGEVLHAPSGRRAAYGSLVDAAAKLPVPAEVALKKPEAFTLIGKPVKRLDSPEKVD GTARFGLDVRLPGMLYAAIVNSPVFGGTVASVDDSAAKRVPGVRQVVRVDNAVAVVGEHTWAAKRGAAALVITWHEGAGA HVSMDDIVGDLARAAERPGAVARNDGDVAKALGAASARVESVYQQPFLAHATMEPVNCTVHVRGDGCEIWVGTQVPGFAI EAAKRVTGFDESRVVLHNHLLGGGFGRRLETDMIAQALKVGKQVDAPVKVVWTREEDIRHDMYRPYYYDRISAGVDANGK PVAWQHRIAGSSIMARFAPGAVKNGVDSDAVEVAADLPYEIPNQRIEYVRQEPRHVPTAFWRGVGPTRGAFVVESFIDEL AVRAKADPVAYRRSLLGRTPRARDVLDVVARAAGWGQAVPAGRGRGVSVLHAFGSFFSMIADVAVADGEVVVERVVCAVD CGMVVNPDTVEAQIQGGIVFGITAALYGEITIRDGRVEQSNFTDYRMLRINQTPKIDVHIVKSAQAPGGIGEPGTSAIAA ALANAIHAATGKRLYRLPVGDQLKTA
Sequences:
>Translated_746_residues MSSGIIEASRAARAAGGDATGISRRHFLQAGFTLGAAAGGGLLLGFAVPAAGGATRPSVIGGDAPDQAPAGLFAPNAFVR IDRAGQVTLVMPKVEMGQGVYTSIPMLIAEELEVPLDSVVLDHAPADAKRYGDPLLGGGQLTGGSTSIRYAWEPMRRAGA TARTLLVAAAAQQWNVDPASCRAANGEVLHAPSGRRAAYGSLVDAAAKLPVPAEVALKKPEAFTLIGKPVKRLDSPEKVD GTARFGLDVRLPGMLYAAIVNSPVFGGTVASVDDSAAKRVPGVRQVVRVDNAVAVVGEHTWAAKRGAAALVITWHEGAGA HVSMDDIVGDLARAAERPGAVARNDGDVAKALGAASARVESVYQQPFLAHATMEPVNCTVHVRGDGCEIWVGTQVPGFAI EAAKRVTGFDESRVVLHNHLLGGGFGRRLETDMIAQALKVGKQVDAPVKVVWTREEDIRHDMYRPYYYDRISAGVDANGK PVAWQHRIAGSSIMARFAPGAVKNGVDSDAVEVAADLPYEIPNQRIEYVRQEPRHVPTAFWRGVGPTRGAFVVESFIDEL AVRAKADPVAYRRSLLGRTPRARDVLDVVARAAGWGQAVPAGRGRGVSVLHAFGSFFSMIADVAVADGEVVVERVVCAVD CGMVVNPDTVEAQIQGGIVFGITAALYGEITIRDGRVEQSNFTDYRMLRINQTPKIDVHIVKSAQAPGGIGEPGTSAIAA ALANAIHAATGKRLYRLPVGDQLKTA >Mature_745_residues SSGIIEASRAARAAGGDATGISRRHFLQAGFTLGAAAGGGLLLGFAVPAAGGATRPSVIGGDAPDQAPAGLFAPNAFVRI DRAGQVTLVMPKVEMGQGVYTSIPMLIAEELEVPLDSVVLDHAPADAKRYGDPLLGGGQLTGGSTSIRYAWEPMRRAGAT ARTLLVAAAAQQWNVDPASCRAANGEVLHAPSGRRAAYGSLVDAAAKLPVPAEVALKKPEAFTLIGKPVKRLDSPEKVDG TARFGLDVRLPGMLYAAIVNSPVFGGTVASVDDSAAKRVPGVRQVVRVDNAVAVVGEHTWAAKRGAAALVITWHEGAGAH VSMDDIVGDLARAAERPGAVARNDGDVAKALGAASARVESVYQQPFLAHATMEPVNCTVHVRGDGCEIWVGTQVPGFAIE AAKRVTGFDESRVVLHNHLLGGGFGRRLETDMIAQALKVGKQVDAPVKVVWTREEDIRHDMYRPYYYDRISAGVDANGKP VAWQHRIAGSSIMARFAPGAVKNGVDSDAVEVAADLPYEIPNQRIEYVRQEPRHVPTAFWRGVGPTRGAFVVESFIDELA VRAKADPVAYRRSLLGRTPRARDVLDVVARAAGWGQAVPAGRGRGVSVLHAFGSFFSMIADVAVADGEVVVERVVCAVDC GMVVNPDTVEAQIQGGIVFGITAALYGEITIRDGRVEQSNFTDYRMLRINQTPKIDVHIVKSAQAPGGIGEPGTSAIAAA LANAIHAATGKRLYRLPVGDQLKTA
Specific function: Specific towards N-containing N-heterocyclic substrates, including isoquinoline, isoquinolin-5-ol, phthalazine and quinazoline [H]
COG id: COG1529
COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786478, Length=384, Percent_Identity=25.5208333333333, Blast_Score=81, Evalue=2e-16, Organism=Escherichia coli, GI1789230, Length=419, Percent_Identity=24.8210023866348, Blast_Score=75, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000674 - InterPro: IPR008274 - InterPro: IPR012368 - InterPro: IPR006311 [H]
Pfam domain/function: PF02738 Ald_Xan_dh_C2 [H]
EC number: =1.3.99.16 [H]
Molecular weight: Translated: 78391; Mature: 78260
Theoretical pI: Translated: 8.44; Mature: 8.44
Prosite motif: PS00187 TPP_ENZYMES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSGIIEASRAARAAGGDATGISRRHFLQAGFTLGAAAGGGLLLGFAVPAAGGATRPSVI CCCCCCCHHHHHHCCCCCCCCCCHHHHHHHCCEEECCCCCCEEEEEECCCCCCCCCCCCC GGDAPDQAPAGLFAPNAFVRIDRAGQVTLVMPKVEMGQGVYTSIPMLIAEELEVPLDSVV CCCCCCCCCCCCCCCCCEEEEECCCEEEEEECCHHHCCCHHHHHHHHHHHHHCCCHHHHH LDHAPADAKRYGDPLLGGGQLTGGSTSIRYAWEPMRRAGATARTLLVAAAAQQWNVDPAS CCCCCCCHHHCCCCCCCCCEECCCCCEEEEEEHHHHHCCCHHHHHHHHHHHHHCCCCHHH CRAANGEVLHAPSGRRAAYGSLVDAAAKLPVPAEVALKKPEAFTLIGKPVKRLDSPEKVD HCCCCCCEEECCCCCCHHHHHHHHHHHCCCCCHHHHCCCCCEEEEECCHHHHCCCCCCCC GTARFGLDVRLPGMLYAAIVNSPVFGGTVASVDDSAAKRVPGVRQVVRVDNAVAVVGEHT CCEEECEEEECCHHHHHHHHCCCCCCCEEECCCCHHHHHCCCHHHHHHHCCEEEEEECCH WAAKRGAAALVITWHEGAGAHVSMDDIVGDLARAAERPGAVARNDGDVAKALGAASARVE HHHCCCCEEEEEEEECCCCCEEEHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH SVYQQPFLAHATMEPVNCTVHVRGDGCEIWVGTQVPGFAIEAAKRVTGFDESRVVLHNHL HHHHCCCHHCCCCCCCEEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCEEEEEHHH LGGGFGRRLETDMIAQALKVGKQVDAPVKVVWTREEDIRHDMYRPYYYDRISAGVDANGK HCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHCCCHHHHHHHCCCCCCCC PVAWQHRIAGSSIMARFAPGAVKNGVDSDAVEVAADLPYEIPNQRIEYVRQEPRHVPTAF CEEEEEHHCCHHHHHHHCCCHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHH WRGVGPTRGAFVVESFIDELAVRAKADPVAYRRSLLGRTPRARDVLDVVARAAGWGQAVP HCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCC AGRGRGVSVLHAFGSFFSMIADVAVADGEVVVERVVCAVDCGMVVNPDTVEAQIQGGIVF CCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEECCCCEEEEECCCEEE GITAALYGEITIRDGRVEQSNFTDYRMLRINQTPKIDVHIVKSAQAPGGIGEPGTSAIAA EEEEHHEEEEEEECCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCHHHHHH ALANAIHAATGKRLYRLPVGDQLKTA HHHHHHHHHCCCEEEECCCCCCCCCC >Mature Secondary Structure SSGIIEASRAARAAGGDATGISRRHFLQAGFTLGAAAGGGLLLGFAVPAAGGATRPSVI CCCCCCHHHHHHCCCCCCCCCCHHHHHHHCCEEECCCCCCEEEEEECCCCCCCCCCCCC GGDAPDQAPAGLFAPNAFVRIDRAGQVTLVMPKVEMGQGVYTSIPMLIAEELEVPLDSVV CCCCCCCCCCCCCCCCCEEEEECCCEEEEEECCHHHCCCHHHHHHHHHHHHHCCCHHHHH LDHAPADAKRYGDPLLGGGQLTGGSTSIRYAWEPMRRAGATARTLLVAAAAQQWNVDPAS CCCCCCCHHHCCCCCCCCCEECCCCCEEEEEEHHHHHCCCHHHHHHHHHHHHHCCCCHHH CRAANGEVLHAPSGRRAAYGSLVDAAAKLPVPAEVALKKPEAFTLIGKPVKRLDSPEKVD HCCCCCCEEECCCCCCHHHHHHHHHHHCCCCCHHHHCCCCCEEEEECCHHHHCCCCCCCC GTARFGLDVRLPGMLYAAIVNSPVFGGTVASVDDSAAKRVPGVRQVVRVDNAVAVVGEHT CCEEECEEEECCHHHHHHHHCCCCCCCEEECCCCHHHHHCCCHHHHHHHCCEEEEEECCH WAAKRGAAALVITWHEGAGAHVSMDDIVGDLARAAERPGAVARNDGDVAKALGAASARVE HHHCCCCEEEEEEEECCCCCEEEHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH SVYQQPFLAHATMEPVNCTVHVRGDGCEIWVGTQVPGFAIEAAKRVTGFDESRVVLHNHL HHHHCCCHHCCCCCCCEEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCEEEEEHHH LGGGFGRRLETDMIAQALKVGKQVDAPVKVVWTREEDIRHDMYRPYYYDRISAGVDANGK HCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHCCCHHHHHHHCCCCCCCC PVAWQHRIAGSSIMARFAPGAVKNGVDSDAVEVAADLPYEIPNQRIEYVRQEPRHVPTAF CEEEEEHHCCHHHHHHHCCCHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHH WRGVGPTRGAFVVESFIDELAVRAKADPVAYRRSLLGRTPRARDVLDVVARAAGWGQAVP HCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCC AGRGRGVSVLHAFGSFFSMIADVAVADGEVVVERVVCAVDCGMVVNPDTVEAQIQGGIVF CCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEECCCCEEEEECCCEEE GITAALYGEITIRDGRVEQSNFTDYRMLRINQTPKIDVHIVKSAQAPGGIGEPGTSAIAA EEEEHHEEEEEEECCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCHHHHHH ALANAIHAATGKRLYRLPVGDQLKTA HHHHHHHHHCCCEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7782304; 8157655 [H]