| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238023736
Identifier: 238023736
GI number: 238023736
Start: 315703
End: 316770
Strand: Direct
Name: 238023736
Synonym: bglu_2g02680
Alternate gene names: NA
Gene position: 315703-316770 (Clockwise)
Preceding gene: 238023735
Following gene: 238023737
Centisome position: 11.17
GC content: 72.85
Gene sequence:
>1068_bases ATGGCTCGACACTCGGTTTCCCCTTCCCGTCCCATCCCCGAATTCGGTTACGACGACCTGCTGCAGGTTCGCCACGGCGT GACCGACGGCAAGCAGATCGCGCTCGTGGCGCGCGGCAGCCCGCGGCACGGCTTCGTGCTGGAGCGGCACCGGCGCGCGC CCGGCGAGCCGCACTCGATCCAGCGCATCGATGCGGGCGATCGCGCGGCGCTCGCCGCATTCGTCGCGCACGACCCCTAT GCGGCGCAGCTCGGCGACGAATACCGCGCGGTGCTCGATGCGCTGGCCGCGGCCGAGCCGGCCGAGGGCTCCGGCGTTGC GGCTCCGGCCGCCGCGCACGCGCCGGAGCGCTTGCCGGCCTACGCGTCCGAATGCGAGAACGACGCCGAGCTGATCGCGC TGATGCGGCGCATCACGGGCGCCTGCGGCGCCGTGCAGTGCTTCTACCACTGGTTCATGTACGACGAGCGCAGCGGCGAG GTCAGCGCGCATCAGCTGCTGATCGGCGGCGATCCGGCCTGGGCGCAGCGGTACGTGGATCGTCACTGGTATCTGAACGA TCCCGCCGTGGCGCACGCGCAGGACGACACGCGGCCGCTGCGCGGCTCGTCGCTGGCGATGCCGCCCGGCCACTGGCTGA ACCGGCAGGGCCCGCTGCACGGCATGCGCAGCCACCAGTTCCACCCCGCGCACCGGCGGGACGTGGCCACCGTCGGGGTG CTGCACGTGAGCACGGCGGCCGAGCCGCCCGGCGGTGAGGAAGCGCTGTGGGCGCACCGCCGGCCGCTGCGCGGCCTCGC CAACGAACTGCTCGAATGGCAGGTGTTGCGGCGCCGTCGCGAGTTGGCCGCCACCCTCTCGCTGGAGGCGCGCGAGCTGC GCGCGCTGCGGCTGGTGGCGCGCGGCGGCAGCGCCCGCCACGTCGCCGCGGAGCTGGGCGTCACCGAGCGCGCGGTCTAC CAGCTGTTCACCGCGATCAACCGCAAGCTCGACAGCGAGCACATCAAGGTCAGCGCGAACAAGGCGCGGCAGCTCGGGCT GCTTGGCGACGGATATATCCAGGAATGA
Upstream 100 bases:
>100_bases TTCGCAATCCGTTCCCGTCGTCGCGCCGGTTCGATTGGCGAGCGCGGCGGCCGGGCGGACCGCCATCGCCTCCACTCATC CGACAGGTGGTCCGGCGCAC
Downstream 100 bases:
>100_bases TGGAAACGGGCCTGGACATGCCGGAAACGATCTAAGTCATTCCCCCTCGCGATGCCGTTACTGTGCTTCTCAGGAATTGA GCAGAACAAACACGAGAGAG
Product: LuxR family transcriptional regulator
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 355; Mature: 354
Protein sequence:
>355_residues MARHSVSPSRPIPEFGYDDLLQVRHGVTDGKQIALVARGSPRHGFVLERHRRAPGEPHSIQRIDAGDRAALAAFVAHDPY AAQLGDEYRAVLDALAAAEPAEGSGVAAPAAAHAPERLPAYASECENDAELIALMRRITGACGAVQCFYHWFMYDERSGE VSAHQLLIGGDPAWAQRYVDRHWYLNDPAVAHAQDDTRPLRGSSLAMPPGHWLNRQGPLHGMRSHQFHPAHRRDVATVGV LHVSTAAEPPGGEEALWAHRRPLRGLANELLEWQVLRRRRELAATLSLEARELRALRLVARGGSARHVAAELGVTERAVY QLFTAINRKLDSEHIKVSANKARQLGLLGDGYIQE
Sequences:
>Translated_355_residues MARHSVSPSRPIPEFGYDDLLQVRHGVTDGKQIALVARGSPRHGFVLERHRRAPGEPHSIQRIDAGDRAALAAFVAHDPY AAQLGDEYRAVLDALAAAEPAEGSGVAAPAAAHAPERLPAYASECENDAELIALMRRITGACGAVQCFYHWFMYDERSGE VSAHQLLIGGDPAWAQRYVDRHWYLNDPAVAHAQDDTRPLRGSSLAMPPGHWLNRQGPLHGMRSHQFHPAHRRDVATVGV LHVSTAAEPPGGEEALWAHRRPLRGLANELLEWQVLRRRRELAATLSLEARELRALRLVARGGSARHVAAELGVTERAVY QLFTAINRKLDSEHIKVSANKARQLGLLGDGYIQE >Mature_354_residues ARHSVSPSRPIPEFGYDDLLQVRHGVTDGKQIALVARGSPRHGFVLERHRRAPGEPHSIQRIDAGDRAALAAFVAHDPYA AQLGDEYRAVLDALAAAEPAEGSGVAAPAAAHAPERLPAYASECENDAELIALMRRITGACGAVQCFYHWFMYDERSGEV SAHQLLIGGDPAWAQRYVDRHWYLNDPAVAHAQDDTRPLRGSSLAMPPGHWLNRQGPLHGMRSHQFHPAHRRDVATVGVL HVSTAAEPPGGEEALWAHRRPLRGLANELLEWQVLRRRRELAATLSLEARELRALRLVARGGSARHVAAELGVTERAVYQ LFTAINRKLDSEHIKVSANKARQLGLLGDGYIQE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39066; Mature: 38934
Theoretical pI: Translated: 7.88; Mature: 7.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARHSVSPSRPIPEFGYDDLLQVRHGVTDGKQIALVARGSPRHGFVLERHRRAPGEPHSI CCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHCCCCCCCCCE QRIDAGDRAALAAFVAHDPYAAQLGDEYRAVLDALAAAEPAEGSGVAAPAAAHAPERLPA EECCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCHHCCH YASECENDAELIALMRRITGACGAVQCFYHWFMYDERSGEVSAHQLLIGGDPAWAQRYVD HHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHH RHWYLNDPAVAHAQDDTRPLRGSSLAMPPGHWLNRQGPLHGMRSHQFHPAHRRDVATVGV CCEECCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCHHHEEE LHVSTAAEPPGGEEALWAHRRPLRGLANELLEWQVLRRRRELAATLSLEARELRALRLVA EEEECCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RGGSARHVAAELGVTERAVYQLFTAINRKLDSEHIKVSANKARQLGLLGDGYIQE CCCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEECCHHHHCCCCCCCCCCC >Mature Secondary Structure ARHSVSPSRPIPEFGYDDLLQVRHGVTDGKQIALVARGSPRHGFVLERHRRAPGEPHSI CCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHCCCCCCCCCE QRIDAGDRAALAAFVAHDPYAAQLGDEYRAVLDALAAAEPAEGSGVAAPAAAHAPERLPA EECCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCHHCCH YASECENDAELIALMRRITGACGAVQCFYHWFMYDERSGEVSAHQLLIGGDPAWAQRYVD HHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHH RHWYLNDPAVAHAQDDTRPLRGSSLAMPPGHWLNRQGPLHGMRSHQFHPAHRRDVATVGV CCEECCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCHHHEEE LHVSTAAEPPGGEEALWAHRRPLRGLANELLEWQVLRRRRELAATLSLEARELRALRLVA EEEECCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RGGSARHVAAELGVTERAVYQLFTAINRKLDSEHIKVSANKARQLGLLGDGYIQE CCCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEECCHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA