| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238023644
Identifier: 238023644
GI number: 238023644
Start: 175899
End: 177299
Strand: Reverse
Name: 238023644
Synonym: bglu_2g01530
Alternate gene names: NA
Gene position: 177299-175899 (Counterclockwise)
Preceding gene: 238023645
Following gene: 238023611
Centisome position: 6.27
GC content: 64.95
Gene sequence:
>1401_bases ATGCTCGGCACGCCCGCACCCTCACCCGGCACGATCTTCGTACAGATCGCGAGCTATCGCGACCCGCAACTGATCCCGAC GCTGCTCGATCTGATCAATCAGGCACGCCACCCCGGCCGCCTGCGCATCGTCGTCTGCTGGCAGCATGCGGCCGACGAAA CCCTTGGCCAATTCGGGAGGCACGGTTTCGGCGGCTACCATCGCGAGCGATCCGGCGAGCGCATCGTTCAGCATCTGGCC TATCGGGGGGCGCGCGTCGAATTGATCGACGTGCCGCATCTGATGTCGCAAGGCGCGTGCTGGGCGCGCAACCTGCTGCA ACAGCGCTACGACGGCGAGCGCTACACGCTGCAGCTCGATTCGCATCATCGTTTCATCGAGGCCTGGGATACGCTCGCCG TCGAGATGCTCGAGTCGCTGCGCGACGAGAGCGCCAAGCCGGTACTGACCGCCTATCTGCCGAAGTATGATCCGGCGGAC CCGTCGATCCAGGACACCGGCGAGCCGCAGATCATGACCTTCTTCCGGTTCAGCGTGGAAGGGGTCGTGATGTTCCGCTC GGTCAGGCTGCCCGACTGGCAGCGTACGCGTCCCGTACGCGCACGCTTCTACAGCGGCCATTTCACGTTCGCCGACGGCC ATTTCGCCGCTACCGTGCAGCATGATCCCGATTACTTCTTCCTTGGCGAGGAGATCTCGATCGCTGCGCGCGCATTCACG CACGGCTACGATCTCTATCACCCGCACCGCCTCATTGCGTGGCACGAATACACGCGCCGGCACCGCGTGAAGATATGGGA CGACCATACGGACGAGGCCAAGGCGCGCGGCGAGATCAGCGAACATTGGAGCGAGCGCAACGATCGCGCCTACCGCCGCA ATCGCGCGCTGCTGGGCGTGGACGGCACCACGGCCGAGCCGGGCCAGTTCGGCCGCTATGGACTCGGCACCGCACGCTCG TTGGCCGACTACGAAGCCTACGCCGGCATCAGCTTTGCCTGGCGCGGCATCCAGCGTGCCACGCTGCATCACGAACTGCC GGTGCCGGACGCGCCACGCCTGTCCGAGGCCGAATGGAAAGCTTCGCTGCTACGTGCCAACGACGTGCGTGTCTGCCTGC ATCGCGGCCTGTTCGACGAGTATGCCGCCACGCCGGGCCGGTGCGGAACACTGTCGGCGGCGGTATCGGCGCGCGTCGTG GTCCATGACGCCAACGGTGCCATCCTGCACGAGGATGCGATCGACGCCGAAGATCTCGCAAGATACCGCCATAACGACTG GCTCGACTTCTACGCCAGCTTCGAGTCAGCGCTCGACGAACTGCCAACCCGCTATGTCGTCGAGCTGTTCGACGAGGCGG GTGATTTGCTGAGCCGGGTCGGGAACAAGGTCTCCGATTGA
Upstream 100 bases:
>100_bases ACCGCCGCCCGGCAAGATCCAGGCGACCGCGACGATCACTCTGACGATCAACTGAGCTTCCTTCCCAATTTCAGGCCGCG CCACGCGCGGATTTACACGC
Downstream 100 bases:
>100_bases AGCGCAGGCCACGGCGACGCACGGTGTCGGCTGCGGCGTCGGGCCGCCGAGCGGATTGCACCAGGTAAGCGGATTCGGCG CGTAGCGGTAGGGACTGAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 466; Mature: 466
Protein sequence:
>466_residues MLGTPAPSPGTIFVQIASYRDPQLIPTLLDLINQARHPGRLRIVVCWQHAADETLGQFGRHGFGGYHRERSGERIVQHLA YRGARVELIDVPHLMSQGACWARNLLQQRYDGERYTLQLDSHHRFIEAWDTLAVEMLESLRDESAKPVLTAYLPKYDPAD PSIQDTGEPQIMTFFRFSVEGVVMFRSVRLPDWQRTRPVRARFYSGHFTFADGHFAATVQHDPDYFFLGEEISIAARAFT HGYDLYHPHRLIAWHEYTRRHRVKIWDDHTDEAKARGEISEHWSERNDRAYRRNRALLGVDGTTAEPGQFGRYGLGTARS LADYEAYAGISFAWRGIQRATLHHELPVPDAPRLSEAEWKASLLRANDVRVCLHRGLFDEYAATPGRCGTLSAAVSARVV VHDANGAILHEDAIDAEDLARYRHNDWLDFYASFESALDELPTRYVVELFDEAGDLLSRVGNKVSD
Sequences:
>Translated_466_residues MLGTPAPSPGTIFVQIASYRDPQLIPTLLDLINQARHPGRLRIVVCWQHAADETLGQFGRHGFGGYHRERSGERIVQHLA YRGARVELIDVPHLMSQGACWARNLLQQRYDGERYTLQLDSHHRFIEAWDTLAVEMLESLRDESAKPVLTAYLPKYDPAD PSIQDTGEPQIMTFFRFSVEGVVMFRSVRLPDWQRTRPVRARFYSGHFTFADGHFAATVQHDPDYFFLGEEISIAARAFT HGYDLYHPHRLIAWHEYTRRHRVKIWDDHTDEAKARGEISEHWSERNDRAYRRNRALLGVDGTTAEPGQFGRYGLGTARS LADYEAYAGISFAWRGIQRATLHHELPVPDAPRLSEAEWKASLLRANDVRVCLHRGLFDEYAATPGRCGTLSAAVSARVV VHDANGAILHEDAIDAEDLARYRHNDWLDFYASFESALDELPTRYVVELFDEAGDLLSRVGNKVSD >Mature_466_residues MLGTPAPSPGTIFVQIASYRDPQLIPTLLDLINQARHPGRLRIVVCWQHAADETLGQFGRHGFGGYHRERSGERIVQHLA YRGARVELIDVPHLMSQGACWARNLLQQRYDGERYTLQLDSHHRFIEAWDTLAVEMLESLRDESAKPVLTAYLPKYDPAD PSIQDTGEPQIMTFFRFSVEGVVMFRSVRLPDWQRTRPVRARFYSGHFTFADGHFAATVQHDPDYFFLGEEISIAARAFT HGYDLYHPHRLIAWHEYTRRHRVKIWDDHTDEAKARGEISEHWSERNDRAYRRNRALLGVDGTTAEPGQFGRYGLGTARS LADYEAYAGISFAWRGIQRATLHHELPVPDAPRLSEAEWKASLLRANDVRVCLHRGLFDEYAATPGRCGTLSAAVSARVV VHDANGAILHEDAIDAEDLARYRHNDWLDFYASFESALDELPTRYVVELFDEAGDLLSRVGNKVSD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53149; Mature: 53149
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLGTPAPSPGTIFVQIASYRDPQLIPTLLDLINQARHPGRLRIVVCWQHAADETLGQFGR CCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHC HGFGGYHRERSGERIVQHLAYRGARVELIDVPHLMSQGACWARNLLQQRYDGERYTLQLD CCCCCHHHHCHHHHHHHHHHHCCCEEEEEECCHHHHCCCHHHHHHHHHHCCCCEEEEEEC SHHRFIEAWDTLAVEMLESLRDESAKPVLTAYLPKYDPADPSIQDTGEPQIMTFFRFSVE CCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEEHHHC GVVMFRSVRLPDWQRTRPVRARFYSGHFTFADGHFAATVQHDPDYFFLGEEISIAARAFT EEEEEEEECCCCCCCCCCHHEEEEECEEEEECCEEEEEEEECCCEEEECCCHHHHHHHHH HGYDLYHPHRLIAWHEYTRRHRVKIWDDHTDEAKARGEISEHWSERNDRAYRRNRALLGV CCCCCCCCCEEEEHHHHHHCCCEEEECCCCCHHHHCCCHHHHHHHHCCHHHHHCCEEEEC DGTTAEPGQFGRYGLGTARSLADYEAYAGISFAWRGIQRATLHHELPVPDAPRLSEAEWK CCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH ASLLRANDVRVCLHRGLFDEYAATPGRCGTLSAAVSARVVVHDANGAILHEDAIDAEDLA HHHHHCCCHHHHHHHCCHHHHCCCCCCCCHHHHHHEEEEEEECCCCCEEECCCCCHHHHH RYRHNDWLDFYASFESALDELPTRYVVELFDEAGDLLSRVGNKVSD HHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MLGTPAPSPGTIFVQIASYRDPQLIPTLLDLINQARHPGRLRIVVCWQHAADETLGQFGR CCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHC HGFGGYHRERSGERIVQHLAYRGARVELIDVPHLMSQGACWARNLLQQRYDGERYTLQLD CCCCCHHHHCHHHHHHHHHHHCCCEEEEEECCHHHHCCCHHHHHHHHHHCCCCEEEEEEC SHHRFIEAWDTLAVEMLESLRDESAKPVLTAYLPKYDPADPSIQDTGEPQIMTFFRFSVE CCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEEHHHC GVVMFRSVRLPDWQRTRPVRARFYSGHFTFADGHFAATVQHDPDYFFLGEEISIAARAFT EEEEEEEECCCCCCCCCCHHEEEEECEEEEECCEEEEEEEECCCEEEECCCHHHHHHHHH HGYDLYHPHRLIAWHEYTRRHRVKIWDDHTDEAKARGEISEHWSERNDRAYRRNRALLGV CCCCCCCCCEEEEHHHHHHCCCEEEECCCCCHHHHCCCHHHHHHHHCCHHHHHCCEEEEC DGTTAEPGQFGRYGLGTARSLADYEAYAGISFAWRGIQRATLHHELPVPDAPRLSEAEWK CCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH ASLLRANDVRVCLHRGLFDEYAATPGRCGTLSAAVSARVVVHDANGAILHEDAIDAEDLA HHHHHCCCHHHHHHHCCHHHHCCCCCCCCHHHHHHEEEEEEECCCCCEEECCCCCHHHHH RYRHNDWLDFYASFESALDELPTRYVVELFDEAGDLLSRVGNKVSD HHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA