| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238023645
Identifier: 238023645
GI number: 238023645
Start: 177345
End: 178352
Strand: Reverse
Name: 238023645
Synonym: bglu_2g01540
Alternate gene names: NA
Gene position: 178352-177345 (Counterclockwise)
Preceding gene: 238023646
Following gene: 238023644
Centisome position: 6.31
GC content: 61.31
Gene sequence:
>1008_bases ATGAAAACATTCGCCAAGCTTTTCGTCCTGGCCAGCCTCGCGCTGTCCTCACCCGTGTTCGCTGCCTGCCGTCAGATGAC GGACGCTGAGATCAAGGAGGAGATGGACCGGGGATATCTGTCGTTCAAGAAGATAACTGTCGCCATACAGCCCGAGCAAC AGGTGGTATCGATCGATCCGCGGCTCGAGATCGGCGGCGTGATCGCCACCGCCAAATCCACGCTGTTCTCCGTCTACCAC AACTTCGCATCTTGCCCAGGCGGCGGCATCATCCGGTTCGACTCGACGCATTCACCTACCGCGCTACCCAACGTCTACGA TAGCGGCACGCCCGGTATCGGCTATCGCCTGACCTACATGCGCAGAAGCGGATTCAACTCGTTGTTGCCGTTCAGTTCGA ACATACCGGACGGCCCGGCGAGCGGAAACTGGGCACGCTTCGGCATTGGCTCCTACTTCAAGCTGGAGTTGATCCGAACC GGGCAGCTCCAGACCGTCAATCAGGTGGCGAACCTTGGCGAGATCGCCCTCGGCACGGGCAATGGCGATCACGTCCAGAT CATCTCCGTCAAAACGGGGCCGATGACCGTCAAGGTGCTGCCGCACTGCTCGGTCGCCGCAGACAAGCTCAACATCGATT TCGGCACGTTTGGGCCTGACGCCGTCTCCTATACCGACGGCCCTACACAACCGATCGACTTCACCGTGCAATGCATCGGC CCGACTCCGCCGGTCTCGATCACCGCGGCGCTGTCCGGCACGCCCGACCCGGAGAATCCCAGCTTGATCAAGAACGAAGG CGCGGCGCATCTCGGGATTCTCGTGCACGACAGGATTACCGGCACGACCCTCAAGCCCAACGATCCCAACAGCACGCTCG TACAGAATCCGGCAAGCGCACTCCAGTCGCCGTTCCAACTCGCGGCCACGGTGCTACGTGTCGGTACCGCGACACCGCCG CCCGGCAAGATCCAGGCGACCGCGACGATCACTCTGACGATCAACTGA
Upstream 100 bases:
>100_bases ACTTGCTGGCCAAGTGGGATGCGATCGACGACTGAAGTTTAAGGTGACGCGCGAGGCCTGCCAGCGTTCGCGCCCTGCCG CTCGAGGATAAAGAATTTCG
Downstream 100 bases:
>100_bases GCTTCCTTCCCAATTTCAGGCCGCGCCACGCGCGGATTTACACGCATGCTCGGCACGCCCGCACCCTCACCCGGCACGAT CTTCGTACAGATCGCGAGCT
Product: Fimbrial protein
Products: NA
Alternate protein names: Fimbrial Protein Subfamily Protein
Number of amino acids: Translated: 335; Mature: 335
Protein sequence:
>335_residues MKTFAKLFVLASLALSSPVFAACRQMTDAEIKEEMDRGYLSFKKITVAIQPEQQVVSIDPRLEIGGVIATAKSTLFSVYH NFASCPGGGIIRFDSTHSPTALPNVYDSGTPGIGYRLTYMRRSGFNSLLPFSSNIPDGPASGNWARFGIGSYFKLELIRT GQLQTVNQVANLGEIALGTGNGDHVQIISVKTGPMTVKVLPHCSVAADKLNIDFGTFGPDAVSYTDGPTQPIDFTVQCIG PTPPVSITAALSGTPDPENPSLIKNEGAAHLGILVHDRITGTTLKPNDPNSTLVQNPASALQSPFQLAATVLRVGTATPP PGKIQATATITLTIN
Sequences:
>Translated_335_residues MKTFAKLFVLASLALSSPVFAACRQMTDAEIKEEMDRGYLSFKKITVAIQPEQQVVSIDPRLEIGGVIATAKSTLFSVYH NFASCPGGGIIRFDSTHSPTALPNVYDSGTPGIGYRLTYMRRSGFNSLLPFSSNIPDGPASGNWARFGIGSYFKLELIRT GQLQTVNQVANLGEIALGTGNGDHVQIISVKTGPMTVKVLPHCSVAADKLNIDFGTFGPDAVSYTDGPTQPIDFTVQCIG PTPPVSITAALSGTPDPENPSLIKNEGAAHLGILVHDRITGTTLKPNDPNSTLVQNPASALQSPFQLAATVLRVGTATPP PGKIQATATITLTIN >Mature_335_residues MKTFAKLFVLASLALSSPVFAACRQMTDAEIKEEMDRGYLSFKKITVAIQPEQQVVSIDPRLEIGGVIATAKSTLFSVYH NFASCPGGGIIRFDSTHSPTALPNVYDSGTPGIGYRLTYMRRSGFNSLLPFSSNIPDGPASGNWARFGIGSYFKLELIRT GQLQTVNQVANLGEIALGTGNGDHVQIISVKTGPMTVKVLPHCSVAADKLNIDFGTFGPDAVSYTDGPTQPIDFTVQCIG PTPPVSITAALSGTPDPENPSLIKNEGAAHLGILVHDRITGTTLKPNDPNSTLVQNPASALQSPFQLAATVLRVGTATPP PGKIQATATITLTIN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35394; Mature: 35394
Theoretical pI: Translated: 7.54; Mature: 7.54
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTFAKLFVLASLALSSPVFAACRQMTDAEIKEEMDRGYLSFKKITVAIQPEQQVVSIDP CCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCEEEEECC RLEIGGVIATAKSTLFSVYHNFASCPGGGIIRFDSTHSPTALPNVYDSGTPGIGYRLTYM CEEECEEEEHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCEEEEEE RRSGFNSLLPFSSNIPDGPASGNWARFGIGSYFKLELIRTGQLQTVNQVANLGEIALGTG ECCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEEEEECCCCHHHHHHHCCCCEEEECC NGDHVQIISVKTGPMTVKVLPHCSVAADKLNIDFGTFGPDAVSYTDGPTQPIDFTVQCIG CCCEEEEEEEECCCEEEEECCCCCEEECEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEC PTPPVSITAALSGTPDPENPSLIKNEGAAHLGILVHDRITGTTLKPNDPNSTLVQNPASA CCCCCEEEEEECCCCCCCCCCEEECCCCEEEEEEEECCEECCEECCCCCCCCEECCCHHH LQSPFQLAATVLRVGTATPPPGKIQATATITLTIN HCCHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEEC >Mature Secondary Structure MKTFAKLFVLASLALSSPVFAACRQMTDAEIKEEMDRGYLSFKKITVAIQPEQQVVSIDP CCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCEEEEECC RLEIGGVIATAKSTLFSVYHNFASCPGGGIIRFDSTHSPTALPNVYDSGTPGIGYRLTYM CEEECEEEEHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCEEEEEE RRSGFNSLLPFSSNIPDGPASGNWARFGIGSYFKLELIRTGQLQTVNQVANLGEIALGTG ECCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEEEEECCCCHHHHHHHCCCCEEEECC NGDHVQIISVKTGPMTVKVLPHCSVAADKLNIDFGTFGPDAVSYTDGPTQPIDFTVQCIG CCCEEEEEEEECCCEEEEECCCCCEEECEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEC PTPPVSITAALSGTPDPENPSLIKNEGAAHLGILVHDRITGTTLKPNDPNSTLVQNPASA CCCCCEEEEEECCCCCCCCCCEEECCCCEEEEEEEECCEECCEECCCCCCCCEECCCHHH LQSPFQLAATVLRVGTATPPPGKIQATATITLTIN HCCHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA