| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238023610
Identifier: 238023610
GI number: 238023610
Start: 125193
End: 127871
Strand: Direct
Name: 238023610
Synonym: bglu_2g01150
Alternate gene names: NA
Gene position: 125193-127871 (Clockwise)
Preceding gene: 238023609
Following gene: 238023612
Centisome position: 4.43
GC content: 67.94
Gene sequence:
>2679_bases ATGAGCATTGCAACACTCGAAAAAGGTGATGAGCGCCGCGCGGCCCGCTCGGCAGACGAGGCCGCCCGCTCCGCGAACAG CACCGACCCTGCGCCTCGCGGACACCAGCGCCAGCATATCGAGGCGGCATGCGAGACGGCATGCAGATCGATCGCGCCAG CCTGGCCGCTCGATCGCGCCATCGCCGTCAATCCCTACTGGGAGCGCATCGGCCGCTCCGTGAGGGAGGTGGCCGCCCGG ATGGCGGTGCTCGCCGATATCCAGGTGTTTCCGTCGCGCGATCACGTCCGCGCGGCATGGGAAGCGGGGCGCATCACGCC GGCAGATCTACGGTATGCATTGCAGGCCCTGCCGGCCGCGAAAGCGGCCGGCATGACCGAGCGCACCTGCATAGAGGCGT TGACGCGTCCGCTCAACCTCACCCGCCTGCCCTTGCTGATCGACGTGCTCGACGACGACCCGTTGCGTCATGATCGCCTG TCGTGGCGTCAGGCGATCACCCATCAGGTCAGCCAGACCTGCGCGGCCTACTTCGACGAGCATCAGGCGGACTGGCGGCC ACATCATCGCCAGGGCCTCTATGCCTTCTGGCGAGACACGATCTCGCACGACCATGGCATCGGCGTGCTGATGGGCCTGC CGAGTCTCGGCCAGTCGCTCGAGGCGCTGCCGGCCACGCGCCAGGATGCCGAGTCGTGGGTACTGCAGCGGCTCGGCCTT CCGCAGGCGGTGTGGGCGGACTACCTGGAGGCGGTACTTCTGACGGTCAACGGCTGGGCGTCTTGGTGCGCCTACCTCGG CTGGCAGGCTCGGCTGGGCGGCCAGTCCGACGAACACCTGCGCGACCTGCTCGCCATCCGCTTGGCATGGGGCGCGCTGT TGCTCGAGTGCAAGGACGATGCAGCGGCGCGTCGCGCCTTTGCGGCCGTGCAAGGCAACTGGCGAGATTCGGGAGCGCTG CTGGCCGATGCGCACGCGCAGCTGCTGGTCGACGAGGTCTGGCAGTTCGCCTTCGAGGCCGGCTACCAGCGCGAATTGGC CAGCAAGCTCGTCGCGATCGGGGGGCCCCGGGCAACCCAACACGCTGCATCGGAGATCGAAGTCCAGGCTGCGTTTTGCA TCGACGTGCGCAGCGAGCCGTTGCGCCGCGCCGTCGAGTCGATCTGGCCGGCGGTCCGCACCATCGGCTTCGCCGGGTTC TTCGGTCTTCCCGTCGCTTACACGCCGCTGGCCACGTCGGCGCGGCGCCCGCAGCTTCCCGGCCTGCTGGCCCCTGCCCT GGAGGTCAGGGATGCGGTATCGGCAACGGCCGGCCAAGGCGACGGAACCATGAGCGGCGCGGCGAGCGAGGCCCGCCGCA CACGCTTCGGATTGTCGAATCAGGTGTCTGCCGCGACCCGGTTGCCCGGCACCTCCTTCTCCTTCGTGGAGGCTGCCGGC CTGGGCTATCTGGGAAAGATGCGACAGTGGTTGAAGCCGTCGCGCAACCAGCGCGTTCGCGACGACCTCGCCGGTCTGCC GAACCGCTACAAGGCGCTCTGCCGTCCCACGCTCGCCGGCACCGACTACGAAACCAAGGTCGACCTCGCCGCGAGCGTCC TGCGCGGCATGGGAATCGAACGCACGCTTGCACCACTGGTCGTCCTCATCGGCCACGCCAGCCAGAGCGTCAACAATGCG CATGCCGCGGCTCTCGACTGCGGCGCCTGCTGCGGCCAGAGCGGCGAAGTGAACGCACGCGCGCTCGCGCAGATCCTGAA CGATCCCATGGTGCACGCAGGTCTCGAGCAGCGGGGCATCGTCGTGCCTCGCGAAACGACCTTCGTCGCGGCCCTGCACA ACACCACGACCGACGAGATCGAAGGCTTCGACCTCGATCTCCTGAGCCCGAGCGCCGCGGCGCGCTGGGACAAGCTGCTG GGCGTGTTCGGCCATGCCTGTGATCAGGTGCGCCGCGAGCGTGCGGTGCGCCTTGGCCTCGACCCGCGCATGGAAGCGGA CCGGCTACTGGCCCGCTTGCGCGAGCGTGCCAACGACGGCGCGCAAACCCGTCCGGAATGGGGGCTGGCCGGCAATGCCG CCTTCATCATCGCGCCCCGCCGTCGTAGCCTTGGCGCCGTACTCGATGGTCGCTGCTTTCTGCACGACTACGATTGCACG CACGATACCGAGGGCCGGCGGCTCGAACAACTGATGACCGCGCCGATGATCGTCGCGCACTGGATCAACTGGCAATACCA TGCCTCGACCTGCGATCCCTCGCACATGGGCTGTGGCAACAAGGTCCTCCACAACGTCGTCGGCGGGCATATCGGCGTCT TTGAGGGCAATAGTGGCGACCTGCGCATCGGCCTCTCGAAACAGTCGCTGCATGATGGCCGCCGCTGGATGCACGAGCCC TTGCGACTGACCGTGATCATCGATGCGCCGGGCGCAGCGATCGAGCGCGTGATCGACCAGCATCCGACCGTGCGGCAATT GCTTCACAACGGCTGGCTTCATCTCTGGCGCTTCGGTGAGTCGGGGCTGTTGCGTTTCAGCGATGGGGCCTGGCACGAAC TTGAGATGGGCCTGGAGTCGAGCGCTTTCCCGGCCCCGCGCATTGGCATCCGGCGCGGTGGCGGGCCGGTTCGACACGAT AGCGGAAGCGGCGTAGACACGGCGCCCGCTGCCGGCTAG
Upstream 100 bases:
>100_bases GGCTCGCTGGGCGCCGCGCGACGCCGCCCGAGGGCCGCGGCCGGCAGCGGGCGCGTCGCCCGTTCTCACCGAGCAATGAG CCGCTTATCCGGAGAATCAC
Downstream 100 bases:
>100_bases GCGTTTCGGCGTCGACAGCAGCCCGATGGAAGCCCGGGCTGGCACAAAGTATCCGTCGCCCACATGTCGGCCCTGAACCA TTCGCGAAGGCTCGTGGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 892; Mature: 891
Protein sequence:
>892_residues MSIATLEKGDERRAARSADEAARSANSTDPAPRGHQRQHIEAACETACRSIAPAWPLDRAIAVNPYWERIGRSVREVAAR MAVLADIQVFPSRDHVRAAWEAGRITPADLRYALQALPAAKAAGMTERTCIEALTRPLNLTRLPLLIDVLDDDPLRHDRL SWRQAITHQVSQTCAAYFDEHQADWRPHHRQGLYAFWRDTISHDHGIGVLMGLPSLGQSLEALPATRQDAESWVLQRLGL PQAVWADYLEAVLLTVNGWASWCAYLGWQARLGGQSDEHLRDLLAIRLAWGALLLECKDDAAARRAFAAVQGNWRDSGAL LADAHAQLLVDEVWQFAFEAGYQRELASKLVAIGGPRATQHAASEIEVQAAFCIDVRSEPLRRAVESIWPAVRTIGFAGF FGLPVAYTPLATSARRPQLPGLLAPALEVRDAVSATAGQGDGTMSGAASEARRTRFGLSNQVSAATRLPGTSFSFVEAAG LGYLGKMRQWLKPSRNQRVRDDLAGLPNRYKALCRPTLAGTDYETKVDLAASVLRGMGIERTLAPLVVLIGHASQSVNNA HAAALDCGACCGQSGEVNARALAQILNDPMVHAGLEQRGIVVPRETTFVAALHNTTTDEIEGFDLDLLSPSAAARWDKLL GVFGHACDQVRRERAVRLGLDPRMEADRLLARLRERANDGAQTRPEWGLAGNAAFIIAPRRRSLGAVLDGRCFLHDYDCT HDTEGRRLEQLMTAPMIVAHWINWQYHASTCDPSHMGCGNKVLHNVVGGHIGVFEGNSGDLRIGLSKQSLHDGRRWMHEP LRLTVIIDAPGAAIERVIDQHPTVRQLLHNGWLHLWRFGESGLLRFSDGAWHELEMGLESSAFPAPRIGIRRGGGPVRHD SGSGVDTAPAAG
Sequences:
>Translated_892_residues MSIATLEKGDERRAARSADEAARSANSTDPAPRGHQRQHIEAACETACRSIAPAWPLDRAIAVNPYWERIGRSVREVAAR MAVLADIQVFPSRDHVRAAWEAGRITPADLRYALQALPAAKAAGMTERTCIEALTRPLNLTRLPLLIDVLDDDPLRHDRL SWRQAITHQVSQTCAAYFDEHQADWRPHHRQGLYAFWRDTISHDHGIGVLMGLPSLGQSLEALPATRQDAESWVLQRLGL PQAVWADYLEAVLLTVNGWASWCAYLGWQARLGGQSDEHLRDLLAIRLAWGALLLECKDDAAARRAFAAVQGNWRDSGAL LADAHAQLLVDEVWQFAFEAGYQRELASKLVAIGGPRATQHAASEIEVQAAFCIDVRSEPLRRAVESIWPAVRTIGFAGF FGLPVAYTPLATSARRPQLPGLLAPALEVRDAVSATAGQGDGTMSGAASEARRTRFGLSNQVSAATRLPGTSFSFVEAAG LGYLGKMRQWLKPSRNQRVRDDLAGLPNRYKALCRPTLAGTDYETKVDLAASVLRGMGIERTLAPLVVLIGHASQSVNNA HAAALDCGACCGQSGEVNARALAQILNDPMVHAGLEQRGIVVPRETTFVAALHNTTTDEIEGFDLDLLSPSAAARWDKLL GVFGHACDQVRRERAVRLGLDPRMEADRLLARLRERANDGAQTRPEWGLAGNAAFIIAPRRRSLGAVLDGRCFLHDYDCT HDTEGRRLEQLMTAPMIVAHWINWQYHASTCDPSHMGCGNKVLHNVVGGHIGVFEGNSGDLRIGLSKQSLHDGRRWMHEP LRLTVIIDAPGAAIERVIDQHPTVRQLLHNGWLHLWRFGESGLLRFSDGAWHELEMGLESSAFPAPRIGIRRGGGPVRHD SGSGVDTAPAAG >Mature_891_residues SIATLEKGDERRAARSADEAARSANSTDPAPRGHQRQHIEAACETACRSIAPAWPLDRAIAVNPYWERIGRSVREVAARM AVLADIQVFPSRDHVRAAWEAGRITPADLRYALQALPAAKAAGMTERTCIEALTRPLNLTRLPLLIDVLDDDPLRHDRLS WRQAITHQVSQTCAAYFDEHQADWRPHHRQGLYAFWRDTISHDHGIGVLMGLPSLGQSLEALPATRQDAESWVLQRLGLP QAVWADYLEAVLLTVNGWASWCAYLGWQARLGGQSDEHLRDLLAIRLAWGALLLECKDDAAARRAFAAVQGNWRDSGALL ADAHAQLLVDEVWQFAFEAGYQRELASKLVAIGGPRATQHAASEIEVQAAFCIDVRSEPLRRAVESIWPAVRTIGFAGFF GLPVAYTPLATSARRPQLPGLLAPALEVRDAVSATAGQGDGTMSGAASEARRTRFGLSNQVSAATRLPGTSFSFVEAAGL GYLGKMRQWLKPSRNQRVRDDLAGLPNRYKALCRPTLAGTDYETKVDLAASVLRGMGIERTLAPLVVLIGHASQSVNNAH AAALDCGACCGQSGEVNARALAQILNDPMVHAGLEQRGIVVPRETTFVAALHNTTTDEIEGFDLDLLSPSAAARWDKLLG VFGHACDQVRRERAVRLGLDPRMEADRLLARLRERANDGAQTRPEWGLAGNAAFIIAPRRRSLGAVLDGRCFLHDYDCTH DTEGRRLEQLMTAPMIVAHWINWQYHASTCDPSHMGCGNKVLHNVVGGHIGVFEGNSGDLRIGLSKQSLHDGRRWMHEPL RLTVIIDAPGAAIERVIDQHPTVRQLLHNGWLHLWRFGESGLLRFSDGAWHELEMGLESSAFPAPRIGIRRGGGPVRHDS GSGVDTAPAAG
Specific function: Unknown
COG id: COG3002
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0753 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018752 [H]
Pfam domain/function: PF10070 DUF2309 [H]
EC number: NA
Molecular weight: Translated: 97494; Mature: 97362
Theoretical pI: Translated: 7.34; Mature: 7.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIATLEKGDERRAARSADEAARSANSTDPAPRGHQRQHIEAACETACRSIAPAWPLDRA CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCE IAVNPYWERIGRSVREVAARMAVLADIQVFPSRDHVRAAWEAGRITPADLRYALQALPAA EECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCHHHHHHHHHHCCHH KAAGMTERTCIEALTRPLNLTRLPLLIDVLDDDPLRHDRLSWRQAITHQVSQTCAAYFDE HHCCCHHHHHHHHHHCCCCCCCHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH HQADWRPHHRQGLYAFWRDTISHDHGIGVLMGLPSLGQSLEALPATRQDAESWVLQRLGL HCCCCCCCHHCCHHHHHHHHHCCCCCCEEEECCCHHHHHHHHCCCCHHHHHHHHHHHCCC PQAVWADYLEAVLLTVNGWASWCAYLGWQARLGGQSDEHLRDLLAIRLAWGALLLECKDD CHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHHHEECCCH AAARRAFAAVQGNWRDSGALLADAHAQLLVDEVWQFAFEAGYQRELASKLVAIGGPRATQ HHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHH HAASEIEVQAAFCIDVRSEPLRRAVESIWPAVRTIGFAGFFGLPVAYTPLATSARRPQLP HHHHHEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCC GLLAPALEVRDAVSATAGQGDGTMSGAASEARRTRFGLSNQVSAATRLPGTSFSFVEAAG CHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHCCCCCCCHHHHHHC LGYLGKMRQWLKPSRNQRVRDDLAGLPNRYKALCRPTLAGTDYETKVDLAASVLRGMGIE CCHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCHH RTLAPLVVLIGHASQSVNNAHAAALDCGACCGQSGEVNARALAQILNDPMVHAGLEQRGI HHHHHHHHHHHCCHHHCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHCCCCCCCE VVPRETTFVAALHNTTTDEIEGFDLDLLSPSAAARWDKLLGVFGHACDQVRRERAVRLGL ECCCCCEEEEEECCCCHHHCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC DPRMEADRLLARLRERANDGAQTRPEWGLAGNAAFIIAPRRRSLGAVLDGRCFLHDYDCT CCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEECCEEEEEECCCC HDTEGRRLEQLMTAPMIVAHWINWQYHASTCDPSHMGCGNKVLHNVVGGHIGVFEGNSGD CCCCHHHHHHHHHHHHHHHHHHCCEEECCCCCCHHCCCCHHHHHHHHCCCEEEEECCCCC LRIGLSKQSLHDGRRWMHEPLRLTVIIDAPGAAIERVIDQHPTVRQLLHNGWLHLWRFGE EEEECCHHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHCCHHHHHHHHCCCEEEEEECC SGLLRFSDGAWHELEMGLESSAFPAPRIGIRRGGGPVRHDSGSGVDTAPAAG CCCEEECCCCCHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SIATLEKGDERRAARSADEAARSANSTDPAPRGHQRQHIEAACETACRSIAPAWPLDRA CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCE IAVNPYWERIGRSVREVAARMAVLADIQVFPSRDHVRAAWEAGRITPADLRYALQALPAA EECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCHHHHHHHHHHCCHH KAAGMTERTCIEALTRPLNLTRLPLLIDVLDDDPLRHDRLSWRQAITHQVSQTCAAYFDE HHCCCHHHHHHHHHHCCCCCCCHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH HQADWRPHHRQGLYAFWRDTISHDHGIGVLMGLPSLGQSLEALPATRQDAESWVLQRLGL HCCCCCCCHHCCHHHHHHHHHCCCCCCEEEECCCHHHHHHHHCCCCHHHHHHHHHHHCCC PQAVWADYLEAVLLTVNGWASWCAYLGWQARLGGQSDEHLRDLLAIRLAWGALLLECKDD CHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHHHEECCCH AAARRAFAAVQGNWRDSGALLADAHAQLLVDEVWQFAFEAGYQRELASKLVAIGGPRATQ HHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHH HAASEIEVQAAFCIDVRSEPLRRAVESIWPAVRTIGFAGFFGLPVAYTPLATSARRPQLP HHHHHEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCC GLLAPALEVRDAVSATAGQGDGTMSGAASEARRTRFGLSNQVSAATRLPGTSFSFVEAAG CHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHCCCCCCCHHHHHHC LGYLGKMRQWLKPSRNQRVRDDLAGLPNRYKALCRPTLAGTDYETKVDLAASVLRGMGIE CCHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCHH RTLAPLVVLIGHASQSVNNAHAAALDCGACCGQSGEVNARALAQILNDPMVHAGLEQRGI HHHHHHHHHHHCCHHHCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHCCCCCCCE VVPRETTFVAALHNTTTDEIEGFDLDLLSPSAAARWDKLLGVFGHACDQVRRERAVRLGL ECCCCCEEEEEECCCCHHHCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC DPRMEADRLLARLRERANDGAQTRPEWGLAGNAAFIIAPRRRSLGAVLDGRCFLHDYDCT CCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEECCEEEEEECCCC HDTEGRRLEQLMTAPMIVAHWINWQYHASTCDPSHMGCGNKVLHNVVGGHIGVFEGNSGD CCCCHHHHHHHHHHHHHHHHHHCCEEECCCCCCHHCCCCHHHHHHHHCCCEEEEECCCCC LRIGLSKQSLHDGRRWMHEPLRLTVIIDAPGAAIERVIDQHPTVRQLLHNGWLHLWRFGE EEEECCHHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHCCHHHHHHHHCCCEEEEEECC SGLLRFSDGAWHELEMGLESSAFPAPRIGIRRGGGPVRHDSGSGVDTAPAAG CCCEEECCCCCHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA